Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G46630

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1905255: regulation of RNA binding transcription factor activity0.00E+00
2GO:0015979: photosynthesis2.06E-09
3GO:0006824: cobalt ion transport1.57E-05
4GO:0010480: microsporocyte differentiation1.57E-05
5GO:0009768: photosynthesis, light harvesting in photosystem I2.61E-05
6GO:0034755: iron ion transmembrane transport4.12E-05
7GO:0015995: chlorophyll biosynthetic process1.23E-04
8GO:0042938: dipeptide transport1.53E-04
9GO:0009755: hormone-mediated signaling pathway1.53E-04
10GO:0009765: photosynthesis, light harvesting1.53E-04
11GO:0010438: cellular response to sulfur starvation1.98E-04
12GO:0042549: photosystem II stabilization2.47E-04
13GO:0010190: cytochrome b6f complex assembly2.47E-04
14GO:0009644: response to high light intensity2.50E-04
15GO:0031930: mitochondria-nucleus signaling pathway2.97E-04
16GO:0048437: floral organ development3.49E-04
17GO:0009769: photosynthesis, light harvesting in photosystem II3.49E-04
18GO:0009645: response to low light intensity stimulus3.49E-04
19GO:2000070: regulation of response to water deprivation4.04E-04
20GO:0009819: drought recovery4.04E-04
21GO:0010439: regulation of glucosinolate biosynthetic process4.04E-04
22GO:0006779: porphyrin-containing compound biosynthetic process5.76E-04
23GO:0006782: protoporphyrinogen IX biosynthetic process6.38E-04
24GO:0018119: peptidyl-cysteine S-nitrosylation7.00E-04
25GO:0048229: gametophyte development7.00E-04
26GO:0009682: induced systemic resistance7.00E-04
27GO:0019684: photosynthesis, light reaction7.00E-04
28GO:0015706: nitrate transport7.65E-04
29GO:0010105: negative regulation of ethylene-activated signaling pathway7.65E-04
30GO:0010075: regulation of meristem growth8.30E-04
31GO:0009767: photosynthetic electron transport chain8.30E-04
32GO:0009934: regulation of meristem structural organization8.97E-04
33GO:0009269: response to desiccation1.25E-03
34GO:0009409: response to cold1.40E-03
35GO:0009625: response to insect1.40E-03
36GO:0048653: anther development1.65E-03
37GO:0007018: microtubule-based movement1.82E-03
38GO:0010193: response to ozone1.99E-03
39GO:0000302: response to reactive oxygen species1.99E-03
40GO:0018298: protein-chromophore linkage3.05E-03
41GO:0000160: phosphorelay signal transduction system3.15E-03
42GO:0010218: response to far red light3.25E-03
43GO:0009735: response to cytokinin3.26E-03
44GO:0007568: aging3.36E-03
45GO:0009637: response to blue light3.58E-03
46GO:0009867: jasmonic acid mediated signaling pathway3.58E-03
47GO:0009611: response to wounding3.64E-03
48GO:0034599: cellular response to oxidative stress3.69E-03
49GO:0010114: response to red light4.25E-03
50GO:0042538: hyperosmotic salinity response4.96E-03
51GO:0009736: cytokinin-activated signaling pathway5.21E-03
52GO:0010224: response to UV-B5.34E-03
53GO:0006857: oligopeptide transport5.46E-03
54GO:0030154: cell differentiation7.82E-03
55GO:0042744: hydrogen peroxide catabolic process8.50E-03
56GO:0009739: response to gibberellin1.05E-02
57GO:0009617: response to bacterium1.10E-02
58GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.58E-02
59GO:0009751: response to salicylic acid2.01E-02
60GO:0006629: lipid metabolic process2.03E-02
61GO:0009753: response to jasmonic acid2.14E-02
62GO:0050832: defense response to fungus2.15E-02
63GO:0006357: regulation of transcription from RNA polymerase II promoter2.48E-02
64GO:0009416: response to light stimulus3.06E-02
65GO:0009414: response to water deprivation4.97E-02
RankGO TermAdjusted P value
1GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity1.57E-05
2GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity1.57E-05
3GO:0016851: magnesium chelatase activity1.11E-04
4GO:0042936: dipeptide transporter activity1.53E-04
5GO:0004130: cytochrome-c peroxidase activity2.47E-04
6GO:0004602: glutathione peroxidase activity2.97E-04
7GO:0005381: iron ion transmembrane transporter activity5.76E-04
8GO:0047372: acylglycerol lipase activity7.00E-04
9GO:0008266: poly(U) RNA binding8.97E-04
10GO:0031409: pigment binding1.03E-03
11GO:0033612: receptor serine/threonine kinase binding1.25E-03
12GO:0000156: phosphorelay response regulator activity2.17E-03
13GO:0016168: chlorophyll binding2.65E-03
14GO:0003777: microtubule motor activity5.59E-03
15GO:0005509: calcium ion binding6.63E-03
16GO:0005215: transporter activity7.95E-03
17GO:0008017: microtubule binding1.00E-02
18GO:0004601: peroxidase activity1.32E-02
19GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting1.75E-02
20GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding1.89E-02
21GO:0005515: protein binding1.96E-02
22GO:0016887: ATPase activity2.78E-02
RankGO TermAdjusted P value
1GO:0005943: phosphatidylinositol 3-kinase complex, class IA0.00E+00
2GO:0009535: chloroplast thylakoid membrane6.26E-21
3GO:0009534: chloroplast thylakoid6.23E-17
4GO:0009507: chloroplast5.88E-12
5GO:0009579: thylakoid2.20E-11
6GO:0030095: chloroplast photosystem II7.68E-08
7GO:0009543: chloroplast thylakoid lumen4.66E-07
8GO:0009941: chloroplast envelope1.71E-06
9GO:0009538: photosystem I reaction center3.00E-06
10GO:0031977: thylakoid lumen4.89E-06
11GO:0010287: plastoglobule2.23E-05
12GO:0009654: photosystem II oxygen evolving complex2.61E-05
13GO:0009522: photosystem I5.76E-05
14GO:0009523: photosystem II6.25E-05
15GO:0019898: extrinsic component of membrane6.25E-05
16GO:0010007: magnesium chelatase complex7.34E-05
17GO:0042646: plastid nucleoid1.11E-04
18GO:0009517: PSII associated light-harvesting complex II1.53E-04
19GO:0016363: nuclear matrix2.97E-04
20GO:0030076: light-harvesting complex9.64E-04
21GO:0005871: kinesin complex1.56E-03
22GO:0016021: integral component of membrane1.64E-03
23GO:0009570: chloroplast stroma2.08E-03
24GO:0009706: chloroplast inner membrane6.64E-03
25GO:0005874: microtubule1.50E-02
26GO:0048046: apoplast2.63E-02
27GO:0005622: intracellular4.61E-02
28GO:0016020: membrane4.80E-02
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Gene type



Gene DE type