GO Enrichment Analysis of Co-expressed Genes with
AT3G46290
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1903508: positive regulation of nucleic acid-templated transcription | 0.00E+00 |
| 2 | GO:1903428: positive regulation of reactive oxygen species biosynthetic process | 0.00E+00 |
| 3 | GO:0070584: mitochondrion morphogenesis | 0.00E+00 |
| 4 | GO:0009768: photosynthesis, light harvesting in photosystem I | 3.02E-14 |
| 5 | GO:0018298: protein-chromophore linkage | 4.53E-12 |
| 6 | GO:0009645: response to low light intensity stimulus | 1.29E-08 |
| 7 | GO:0015979: photosynthesis | 1.47E-08 |
| 8 | GO:0009637: response to blue light | 1.37E-07 |
| 9 | GO:0010114: response to red light | 2.46E-07 |
| 10 | GO:0009644: response to high light intensity | 2.94E-07 |
| 11 | GO:0009769: photosynthesis, light harvesting in photosystem II | 4.77E-06 |
| 12 | GO:0010218: response to far red light | 7.84E-06 |
| 13 | GO:0015812: gamma-aminobutyric acid transport | 2.53E-05 |
| 14 | GO:0010362: negative regulation of anion channel activity by blue light | 2.53E-05 |
| 15 | GO:0003333: amino acid transmembrane transport | 5.82E-05 |
| 16 | GO:0010155: regulation of proton transport | 6.44E-05 |
| 17 | GO:0044211: CTP salvage | 1.69E-04 |
| 18 | GO:0015995: chlorophyll biosynthetic process | 2.28E-04 |
| 19 | GO:0009765: photosynthesis, light harvesting | 2.30E-04 |
| 20 | GO:2000306: positive regulation of photomorphogenesis | 2.30E-04 |
| 21 | GO:0010600: regulation of auxin biosynthetic process | 2.30E-04 |
| 22 | GO:0044206: UMP salvage | 2.30E-04 |
| 23 | GO:0015846: polyamine transport | 2.30E-04 |
| 24 | GO:0030104: water homeostasis | 2.30E-04 |
| 25 | GO:0010119: regulation of stomatal movement | 2.94E-04 |
| 26 | GO:0009904: chloroplast accumulation movement | 2.95E-04 |
| 27 | GO:0016123: xanthophyll biosynthetic process | 2.95E-04 |
| 28 | GO:0043097: pyrimidine nucleoside salvage | 2.95E-04 |
| 29 | GO:0009635: response to herbicide | 3.65E-04 |
| 30 | GO:0045962: positive regulation of development, heterochronic | 3.65E-04 |
| 31 | GO:0006206: pyrimidine nucleobase metabolic process | 3.65E-04 |
| 32 | GO:0009903: chloroplast avoidance movement | 4.36E-04 |
| 33 | GO:0010189: vitamin E biosynthetic process | 4.36E-04 |
| 34 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 4.36E-04 |
| 35 | GO:0010161: red light signaling pathway | 5.11E-04 |
| 36 | GO:0009704: de-etiolation | 5.89E-04 |
| 37 | GO:0010928: regulation of auxin mediated signaling pathway | 5.89E-04 |
| 38 | GO:0009827: plant-type cell wall modification | 6.69E-04 |
| 39 | GO:0007186: G-protein coupled receptor signaling pathway | 6.69E-04 |
| 40 | GO:0090333: regulation of stomatal closure | 7.52E-04 |
| 41 | GO:0009638: phototropism | 8.38E-04 |
| 42 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 8.38E-04 |
| 43 | GO:0009416: response to light stimulus | 8.42E-04 |
| 44 | GO:0009688: abscisic acid biosynthetic process | 9.24E-04 |
| 45 | GO:0006535: cysteine biosynthetic process from serine | 9.24E-04 |
| 46 | GO:0030148: sphingolipid biosynthetic process | 1.01E-03 |
| 47 | GO:0018107: peptidyl-threonine phosphorylation | 1.20E-03 |
| 48 | GO:0009767: photosynthetic electron transport chain | 1.20E-03 |
| 49 | GO:0009785: blue light signaling pathway | 1.20E-03 |
| 50 | GO:0007623: circadian rhythm | 1.30E-03 |
| 51 | GO:0019344: cysteine biosynthetic process | 1.61E-03 |
| 52 | GO:0006874: cellular calcium ion homeostasis | 1.72E-03 |
| 53 | GO:0009269: response to desiccation | 1.83E-03 |
| 54 | GO:0010017: red or far-red light signaling pathway | 1.95E-03 |
| 55 | GO:0071215: cellular response to abscisic acid stimulus | 2.06E-03 |
| 56 | GO:0009723: response to ethylene | 2.30E-03 |
| 57 | GO:0070417: cellular response to cold | 2.30E-03 |
| 58 | GO:0010182: sugar mediated signaling pathway | 2.55E-03 |
| 59 | GO:0007018: microtubule-based movement | 2.68E-03 |
| 60 | GO:0006814: sodium ion transport | 2.68E-03 |
| 61 | GO:0009409: response to cold | 2.95E-03 |
| 62 | GO:0000160: phosphorelay signal transduction system | 4.67E-03 |
| 63 | GO:0006811: ion transport | 4.83E-03 |
| 64 | GO:0006865: amino acid transport | 5.15E-03 |
| 65 | GO:0051707: response to other organism | 6.32E-03 |
| 66 | GO:0035556: intracellular signal transduction | 6.72E-03 |
| 67 | GO:0009965: leaf morphogenesis | 6.85E-03 |
| 68 | GO:0009585: red, far-red light phototransduction | 7.78E-03 |
| 69 | GO:0009624: response to nematode | 9.95E-03 |
| 70 | GO:0018105: peptidyl-serine phosphorylation | 1.02E-02 |
| 71 | GO:0009058: biosynthetic process | 1.21E-02 |
| 72 | GO:0009845: seed germination | 1.23E-02 |
| 73 | GO:0006970: response to osmotic stress | 2.10E-02 |
| 74 | GO:0007049: cell cycle | 2.16E-02 |
| 75 | GO:0048366: leaf development | 2.24E-02 |
| 76 | GO:0080167: response to karrikin | 2.32E-02 |
| 77 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.38E-02 |
| 78 | GO:0046777: protein autophosphorylation | 2.44E-02 |
| 79 | GO:0044550: secondary metabolite biosynthetic process | 2.47E-02 |
| 80 | GO:0009737: response to abscisic acid | 2.76E-02 |
| 81 | GO:0032259: methylation | 2.98E-02 |
| 82 | GO:0006629: lipid metabolic process | 3.07E-02 |
| 83 | GO:0009408: response to heat | 3.07E-02 |
| 84 | GO:0016310: phosphorylation | 3.18E-02 |
| 85 | GO:0008152: metabolic process | 3.29E-02 |
| 86 | GO:0009735: response to cytokinin | 4.33E-02 |
| 87 | GO:0009651: response to salt stress | 4.34E-02 |
| 88 | GO:0051301: cell division | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009540: zeaxanthin epoxidase [overall] activity | 0.00E+00 |
| 2 | GO:0030504: inorganic diphosphate transmembrane transporter activity | 0.00E+00 |
| 3 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 4 | GO:0031409: pigment binding | 5.48E-12 |
| 5 | GO:0016168: chlorophyll binding | 3.70E-10 |
| 6 | GO:0015185: gamma-aminobutyric acid transmembrane transporter activity | 2.53E-05 |
| 7 | GO:0052631: sphingolipid delta-8 desaturase activity | 2.53E-05 |
| 8 | GO:0015180: L-alanine transmembrane transporter activity | 6.44E-05 |
| 9 | GO:0050017: L-3-cyanoalanine synthase activity | 6.44E-05 |
| 10 | GO:0080045: quercetin 3'-O-glucosyltransferase activity | 6.44E-05 |
| 11 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 1.13E-04 |
| 12 | GO:0009882: blue light photoreceptor activity | 1.69E-04 |
| 13 | GO:0015189: L-lysine transmembrane transporter activity | 1.69E-04 |
| 14 | GO:0015181: arginine transmembrane transporter activity | 1.69E-04 |
| 15 | GO:0015203: polyamine transmembrane transporter activity | 1.69E-04 |
| 16 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 1.69E-04 |
| 17 | GO:0004845: uracil phosphoribosyltransferase activity | 2.30E-04 |
| 18 | GO:0005313: L-glutamate transmembrane transporter activity | 2.30E-04 |
| 19 | GO:0004930: G-protein coupled receptor activity | 2.30E-04 |
| 20 | GO:0080046: quercetin 4'-O-glucosyltransferase activity | 3.65E-04 |
| 21 | GO:0004124: cysteine synthase activity | 4.36E-04 |
| 22 | GO:0004849: uridine kinase activity | 4.36E-04 |
| 23 | GO:0015293: symporter activity | 4.65E-04 |
| 24 | GO:0015171: amino acid transmembrane transporter activity | 6.12E-04 |
| 25 | GO:0071949: FAD binding | 7.52E-04 |
| 26 | GO:0015174: basic amino acid transmembrane transporter activity | 8.38E-04 |
| 27 | GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity | 9.24E-04 |
| 28 | GO:0005315: inorganic phosphate transmembrane transporter activity | 1.20E-03 |
| 29 | GO:0000155: phosphorelay sensor kinase activity | 1.20E-03 |
| 30 | GO:0004565: beta-galactosidase activity | 1.20E-03 |
| 31 | GO:0015297: antiporter activity | 1.25E-03 |
| 32 | GO:0004970: ionotropic glutamate receptor activity | 1.40E-03 |
| 33 | GO:0004190: aspartic-type endopeptidase activity | 1.40E-03 |
| 34 | GO:0005217: intracellular ligand-gated ion channel activity | 1.40E-03 |
| 35 | GO:0005216: ion channel activity | 1.72E-03 |
| 36 | GO:0008514: organic anion transmembrane transporter activity | 2.18E-03 |
| 37 | GO:0010181: FMN binding | 2.68E-03 |
| 38 | GO:0004672: protein kinase activity | 3.27E-03 |
| 39 | GO:0004674: protein serine/threonine kinase activity | 3.35E-03 |
| 40 | GO:0016301: kinase activity | 6.05E-03 |
| 41 | GO:0051537: 2 iron, 2 sulfur cluster binding | 6.67E-03 |
| 42 | GO:0005198: structural molecule activity | 6.85E-03 |
| 43 | GO:0046872: metal ion binding | 7.49E-03 |
| 44 | GO:0003777: microtubule motor activity | 8.35E-03 |
| 45 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 9.34E-03 |
| 46 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 9.34E-03 |
| 47 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.19E-02 |
| 48 | GO:0030170: pyridoxal phosphate binding | 1.25E-02 |
| 49 | GO:0015144: carbohydrate transmembrane transporter activity | 1.32E-02 |
| 50 | GO:0005524: ATP binding | 1.37E-02 |
| 51 | GO:0005351: sugar:proton symporter activity | 1.44E-02 |
| 52 | GO:0008017: microtubule binding | 1.51E-02 |
| 53 | GO:0008194: UDP-glycosyltransferase activity | 1.58E-02 |
| 54 | GO:0042802: identical protein binding | 1.73E-02 |
| 55 | GO:0008168: methyltransferase activity | 1.94E-02 |
| 56 | GO:0008233: peptidase activity | 2.30E-02 |
| 57 | GO:0005515: protein binding | 2.51E-02 |
| 58 | GO:0004519: endonuclease activity | 3.26E-02 |
| 59 | GO:0008289: lipid binding | 3.88E-02 |
| 60 | GO:0016887: ATPase activity | 4.19E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009522: photosystem I | 3.19E-13 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 3.61E-12 |
| 3 | GO:0009579: thylakoid | 3.01E-10 |
| 4 | GO:0009534: chloroplast thylakoid | 3.14E-10 |
| 5 | GO:0030076: light-harvesting complex | 1.23E-09 |
| 6 | GO:0009941: chloroplast envelope | 3.89E-09 |
| 7 | GO:0009523: photosystem II | 1.53E-08 |
| 8 | GO:0010287: plastoglobule | 2.65E-08 |
| 9 | GO:0042651: thylakoid membrane | 5.21E-05 |
| 10 | GO:0009507: chloroplast | 7.54E-05 |
| 11 | GO:0009898: cytoplasmic side of plasma membrane | 2.30E-04 |
| 12 | GO:0009517: PSII associated light-harvesting complex II | 2.30E-04 |
| 13 | GO:0030660: Golgi-associated vesicle membrane | 2.30E-04 |
| 14 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 2.30E-04 |
| 15 | GO:0009986: cell surface | 5.11E-04 |
| 16 | GO:0009538: photosystem I reaction center | 5.89E-04 |
| 17 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 5.89E-04 |
| 18 | GO:0016021: integral component of membrane | 9.84E-04 |
| 19 | GO:0005765: lysosomal membrane | 1.01E-03 |
| 20 | GO:0005871: kinesin complex | 2.30E-03 |
| 21 | GO:0031969: chloroplast membrane | 2.46E-03 |
| 22 | GO:0005887: integral component of plasma membrane | 4.88E-03 |
| 23 | GO:0016020: membrane | 5.22E-03 |
| 24 | GO:0031966: mitochondrial membrane | 7.40E-03 |
| 25 | GO:0010008: endosome membrane | 8.93E-03 |
| 26 | GO:0009706: chloroplast inner membrane | 9.95E-03 |
| 27 | GO:0005874: microtubule | 2.27E-02 |
| 28 | GO:0043231: intracellular membrane-bounded organelle | 3.29E-02 |
| 29 | GO:0005886: plasma membrane | 3.44E-02 |