Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G45970

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0033481: galacturonate biosynthetic process4.88E-05
2GO:0080164: regulation of nitric oxide metabolic process4.88E-05
3GO:0010200: response to chitin7.80E-05
4GO:0071497: cellular response to freezing1.20E-04
5GO:0051592: response to calcium ion1.20E-04
6GO:0009751: response to salicylic acid1.43E-04
7GO:2000022: regulation of jasmonic acid mediated signaling pathway1.63E-04
8GO:0010581: regulation of starch biosynthetic process2.06E-04
9GO:0006556: S-adenosylmethionine biosynthetic process2.06E-04
10GO:0009873: ethylene-activated signaling pathway2.26E-04
11GO:0000271: polysaccharide biosynthetic process2.32E-04
12GO:0009741: response to brassinosteroid2.50E-04
13GO:0046345: abscisic acid catabolic process4.04E-04
14GO:0009788: negative regulation of abscisic acid-activated signaling pathway4.74E-04
15GO:0009164: nucleoside catabolic process5.13E-04
16GO:0060918: auxin transport6.29E-04
17GO:0006555: methionine metabolic process6.29E-04
18GO:0009612: response to mechanical stimulus7.50E-04
19GO:0050829: defense response to Gram-negative bacterium8.75E-04
20GO:0051510: regulation of unidimensional cell growth8.75E-04
21GO:0010038: response to metal ion8.75E-04
22GO:0042542: response to hydrogen peroxide8.93E-04
23GO:0030162: regulation of proteolysis1.01E-03
24GO:0031347: regulation of defense response1.11E-03
25GO:0048574: long-day photoperiodism, flowering1.14E-03
26GO:2000031: regulation of salicylic acid mediated signaling pathway1.14E-03
27GO:0010099: regulation of photomorphogenesis1.14E-03
28GO:0030154: cell differentiation1.25E-03
29GO:0009753: response to jasmonic acid1.28E-03
30GO:0009733: response to auxin1.31E-03
31GO:0043069: negative regulation of programmed cell death1.59E-03
32GO:0006357: regulation of transcription from RNA polymerase II promoter1.67E-03
33GO:0009409: response to cold1.73E-03
34GO:1903507: negative regulation of nucleic acid-templated transcription1.75E-03
35GO:0000038: very long-chain fatty acid metabolic process1.75E-03
36GO:0018107: peptidyl-threonine phosphorylation2.08E-03
37GO:0034605: cellular response to heat2.26E-03
38GO:0009969: xyloglucan biosynthetic process2.44E-03
39GO:0009225: nucleotide-sugar metabolic process2.44E-03
40GO:0019953: sexual reproduction3.01E-03
41GO:0016998: cell wall macromolecule catabolic process3.20E-03
42GO:0006730: one-carbon metabolic process3.41E-03
43GO:0040007: growth3.61E-03
44GO:0019722: calcium-mediated signaling3.82E-03
45GO:0009826: unidimensional cell growth4.38E-03
46GO:0045489: pectin biosynthetic process4.48E-03
47GO:0010268: brassinosteroid homeostasis4.48E-03
48GO:0009646: response to absence of light4.71E-03
49GO:0009791: post-embryonic development4.94E-03
50GO:0002229: defense response to oomycetes5.18E-03
51GO:0016132: brassinosteroid biosynthetic process5.18E-03
52GO:0009723: response to ethylene5.26E-03
53GO:0010583: response to cyclopentenone5.42E-03
54GO:0009414: response to water deprivation5.71E-03
55GO:0009639: response to red or far red light5.91E-03
56GO:0009828: plant-type cell wall loosening5.91E-03
57GO:0016125: sterol metabolic process5.91E-03
58GO:0016567: protein ubiquitination5.92E-03
59GO:0046777: protein autophosphorylation6.02E-03
60GO:0007267: cell-cell signaling6.16E-03
61GO:0001666: response to hypoxia6.67E-03
62GO:0010411: xyloglucan metabolic process7.48E-03
63GO:0048573: photoperiodism, flowering7.48E-03
64GO:0006629: lipid metabolic process8.31E-03
65GO:0048767: root hair elongation8.31E-03
66GO:0048527: lateral root development8.88E-03
67GO:0045087: innate immune response9.47E-03
68GO:0016051: carbohydrate biosynthetic process9.47E-03
69GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.30E-02
70GO:0009664: plant-type cell wall organization1.33E-02
71GO:0009809: lignin biosynthetic process1.40E-02
72GO:0006486: protein glycosylation1.40E-02
73GO:0009585: red, far-red light phototransduction1.40E-02
74GO:0009738: abscisic acid-activated signaling pathway1.43E-02
75GO:0009909: regulation of flower development1.50E-02
76GO:0009737: response to abscisic acid1.54E-02
77GO:0006355: regulation of transcription, DNA-templated1.67E-02
78GO:0045893: positive regulation of transcription, DNA-templated1.70E-02
79GO:0018105: peptidyl-serine phosphorylation1.83E-02
80GO:0009742: brassinosteroid mediated signaling pathway1.87E-02
81GO:0042744: hydrogen peroxide catabolic process2.31E-02
82GO:0006633: fatty acid biosynthetic process2.47E-02
83GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.87E-02
84GO:0009739: response to gibberellin2.87E-02
85GO:0006470: protein dephosphorylation2.91E-02
86GO:0009658: chloroplast organization3.61E-02
87GO:0006970: response to osmotic stress3.81E-02
88GO:0009860: pollen tube growth3.81E-02
89GO:0007049: cell cycle3.91E-02
90GO:0048366: leaf development4.06E-02
91GO:0045454: cell redox homeostasis4.78E-02
RankGO TermAdjusted P value
1GO:0080132: fatty acid alpha-hydroxylase activity4.88E-05
2GO:0010295: (+)-abscisic acid 8'-hydroxylase activity2.06E-04
3GO:0004478: methionine adenosyltransferase activity2.06E-04
4GO:0033843: xyloglucan 6-xylosyltransferase activity3.01E-04
5GO:0050378: UDP-glucuronate 4-epimerase activity4.04E-04
6GO:0002020: protease binding5.13E-04
7GO:0035252: UDP-xylosyltransferase activity6.29E-04
8GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides7.50E-04
9GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting9.09E-04
10GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding1.04E-03
11GO:0044212: transcription regulatory region DNA binding1.10E-03
12GO:0016758: transferase activity, transferring hexosyl groups2.10E-03
13GO:0003712: transcription cofactor activity2.44E-03
14GO:0003714: transcription corepressor activity2.81E-03
15GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.41E-03
16GO:0043565: sequence-specific DNA binding3.43E-03
17GO:0005516: calmodulin binding4.04E-03
18GO:0004402: histone acetyltransferase activity4.26E-03
19GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity6.16E-03
20GO:0004806: triglyceride lipase activity7.48E-03
21GO:0004842: ubiquitin-protein transferase activity8.87E-03
22GO:0004674: protein serine/threonine kinase activity1.23E-02
23GO:0016298: lipase activity1.43E-02
24GO:0031625: ubiquitin protein ligase binding1.50E-02
25GO:0015035: protein disulfide oxidoreductase activity1.83E-02
26GO:0016757: transferase activity, transferring glycosyl groups2.77E-02
27GO:0005506: iron ion binding2.95E-02
28GO:0003824: catalytic activity3.29E-02
29GO:0003700: transcription factor activity, sequence-specific DNA binding3.50E-02
30GO:0004601: peroxidase activity3.61E-02
31GO:0004672: protein kinase activity4.39E-02
32GO:0020037: heme binding4.71E-02
33GO:0003677: DNA binding4.76E-02
34GO:0004871: signal transducer activity4.94E-02
RankGO TermAdjusted P value
1GO:0005615: extracellular space3.69E-04
2GO:0005794: Golgi apparatus3.33E-03
3GO:0015629: actin cytoskeleton3.61E-03
4GO:0032580: Golgi cisterna membrane5.91E-03
5GO:0016021: integral component of membrane7.39E-03
6GO:0048046: apoplast7.75E-03
7GO:0019005: SCF ubiquitin ligase complex8.03E-03
8GO:0005886: plasma membrane1.96E-02
9GO:0005802: trans-Golgi network2.37E-02
10GO:0005768: endosome2.70E-02
11GO:0009505: plant-type cell wall3.75E-02
12GO:0000139: Golgi membrane4.05E-02
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Gene type



Gene DE type