Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G45860

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0000169: activation of MAPK activity involved in osmosensory signaling pathway0.00E+00
2GO:0070212: protein poly-ADP-ribosylation0.00E+00
3GO:0045792: negative regulation of cell size0.00E+00
4GO:0072660: maintenance of protein location in plasma membrane0.00E+00
5GO:0042742: defense response to bacterium7.29E-12
6GO:0009617: response to bacterium5.52E-11
7GO:0010200: response to chitin7.07E-10
8GO:0010120: camalexin biosynthetic process3.32E-08
9GO:0050832: defense response to fungus7.20E-07
10GO:0009626: plant-type hypersensitive response7.96E-07
11GO:0009751: response to salicylic acid1.09E-05
12GO:0006979: response to oxidative stress1.35E-05
13GO:0015696: ammonium transport1.50E-05
14GO:0006952: defense response1.83E-05
15GO:0006457: protein folding1.97E-05
16GO:0072488: ammonium transmembrane transport2.77E-05
17GO:0006886: intracellular protein transport6.27E-05
18GO:0009759: indole glucosinolate biosynthetic process6.61E-05
19GO:0009625: response to insect7.56E-05
20GO:0006468: protein phosphorylation8.12E-05
21GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response9.18E-05
22GO:0051245: negative regulation of cellular defense response1.93E-04
23GO:0009609: response to symbiotic bacterium1.93E-04
24GO:0009700: indole phytoalexin biosynthetic process1.93E-04
25GO:0080136: priming of cellular response to stress1.93E-04
26GO:0055081: anion homeostasis1.93E-04
27GO:0050691: regulation of defense response to virus by host1.93E-04
28GO:0060862: negative regulation of floral organ abscission1.93E-04
29GO:0030968: endoplasmic reticulum unfolded protein response1.95E-04
30GO:0009816: defense response to bacterium, incompatible interaction2.97E-04
31GO:0009627: systemic acquired resistance3.20E-04
32GO:0043069: negative regulation of programmed cell death3.32E-04
33GO:0080185: effector dependent induction by symbiont of host immune response4.33E-04
34GO:0080181: lateral root branching4.33E-04
35GO:0031349: positive regulation of defense response4.33E-04
36GO:0051258: protein polymerization4.33E-04
37GO:0010541: acropetal auxin transport4.33E-04
38GO:0002221: pattern recognition receptor signaling pathway4.33E-04
39GO:0080151: positive regulation of salicylic acid mediated signaling pathway4.33E-04
40GO:0002237: response to molecule of bacterial origin5.65E-04
41GO:0070588: calcium ion transmembrane transport6.32E-04
42GO:0007166: cell surface receptor signaling pathway6.83E-04
43GO:0034976: response to endoplasmic reticulum stress7.02E-04
44GO:0048281: inflorescence morphogenesis7.06E-04
45GO:0015695: organic cation transport7.06E-04
46GO:0010581: regulation of starch biosynthetic process7.06E-04
47GO:0055074: calcium ion homeostasis7.06E-04
48GO:1900140: regulation of seedling development7.06E-04
49GO:0072661: protein targeting to plasma membrane7.06E-04
50GO:0051707: response to other organism7.33E-04
51GO:0009409: response to cold7.59E-04
52GO:0009863: salicylic acid mediated signaling pathway7.77E-04
53GO:0031347: regulation of defense response9.29E-04
54GO:0016998: cell wall macromolecule catabolic process9.35E-04
55GO:0034219: carbohydrate transmembrane transport1.01E-03
56GO:0043207: response to external biotic stimulus1.01E-03
57GO:0072334: UDP-galactose transmembrane transport1.01E-03
58GO:0006612: protein targeting to membrane1.01E-03
59GO:0010148: transpiration1.01E-03
60GO:0000187: activation of MAPK activity1.01E-03
61GO:0009814: defense response, incompatible interaction1.02E-03
62GO:0031348: negative regulation of defense response1.02E-03
63GO:0060548: negative regulation of cell death1.34E-03
64GO:0009652: thigmotropism1.34E-03
65GO:0010363: regulation of plant-type hypersensitive response1.34E-03
66GO:0010508: positive regulation of autophagy1.34E-03
67GO:2000038: regulation of stomatal complex development1.34E-03
68GO:0010188: response to microbial phytotoxin1.34E-03
69GO:0080142: regulation of salicylic acid biosynthetic process1.34E-03
70GO:0009414: response to water deprivation1.39E-03
71GO:0010197: polar nucleus fusion1.51E-03
72GO:0009646: response to absence of light1.62E-03
73GO:0009697: salicylic acid biosynthetic process1.70E-03
74GO:0046283: anthocyanin-containing compound metabolic process1.70E-03
75GO:0031365: N-terminal protein amino acid modification1.70E-03
76GO:0000302: response to reactive oxygen species1.85E-03
77GO:0006891: intra-Golgi vesicle-mediated transport1.85E-03
78GO:0009651: response to salt stress1.85E-03
79GO:0009737: response to abscisic acid2.04E-03
80GO:0060918: auxin transport2.10E-03
81GO:0010942: positive regulation of cell death2.10E-03
82GO:2000037: regulation of stomatal complex patterning2.52E-03
83GO:0009612: response to mechanical stimulus2.52E-03
84GO:0006694: steroid biosynthetic process2.52E-03
85GO:0009615: response to virus2.67E-03
86GO:0009610: response to symbiotic fungus2.96E-03
87GO:0071446: cellular response to salicylic acid stimulus2.96E-03
88GO:1900056: negative regulation of leaf senescence2.96E-03
89GO:0070370: cellular heat acclimation2.96E-03
90GO:0050829: defense response to Gram-negative bacterium2.96E-03
91GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway2.96E-03
92GO:0030162: regulation of proteolysis3.43E-03
93GO:0006605: protein targeting3.43E-03
94GO:0031540: regulation of anthocyanin biosynthetic process3.43E-03
95GO:0006102: isocitrate metabolic process3.43E-03
96GO:0009817: defense response to fungus, incompatible interaction3.47E-03
97GO:0008219: cell death3.47E-03
98GO:0009407: toxin catabolic process3.83E-03
99GO:2000031: regulation of salicylic acid mediated signaling pathway3.93E-03
100GO:0009699: phenylpropanoid biosynthetic process3.93E-03
101GO:0010204: defense response signaling pathway, resistance gene-independent3.93E-03
102GO:0043562: cellular response to nitrogen levels3.93E-03
103GO:0010119: regulation of stomatal movement4.01E-03
104GO:0010112: regulation of systemic acquired resistance4.44E-03
105GO:0015780: nucleotide-sugar transport4.44E-03
106GO:0048268: clathrin coat assembly4.99E-03
107GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway4.99E-03
108GO:0006887: exocytosis5.22E-03
109GO:0010215: cellulose microfibril organization5.55E-03
110GO:0009870: defense response signaling pathway, resistance gene-dependent5.55E-03
111GO:0006032: chitin catabolic process5.55E-03
112GO:0009682: induced systemic resistance6.13E-03
113GO:0052544: defense response by callose deposition in cell wall6.13E-03
114GO:0009636: response to toxic substance6.36E-03
115GO:0009723: response to ethylene6.90E-03
116GO:0010229: inflorescence development7.36E-03
117GO:0010075: regulation of meristem growth7.36E-03
118GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway7.87E-03
119GO:0010224: response to UV-B7.90E-03
120GO:0009266: response to temperature stimulus8.01E-03
121GO:0009934: regulation of meristem structural organization8.01E-03
122GO:0034605: cellular response to heat8.01E-03
123GO:0016192: vesicle-mediated transport8.04E-03
124GO:0009969: xyloglucan biosynthetic process8.67E-03
125GO:0000162: tryptophan biosynthetic process9.35E-03
126GO:0045454: cell redox homeostasis9.48E-03
127GO:0009620: response to fungus9.93E-03
128GO:0009553: embryo sac development1.06E-02
129GO:0009624: response to nematode1.09E-02
130GO:0048278: vesicle docking1.15E-02
131GO:0046686: response to cadmium ion1.15E-02
132GO:0035428: hexose transmembrane transport1.23E-02
133GO:2000022: regulation of jasmonic acid mediated signaling pathway1.23E-02
134GO:0030433: ubiquitin-dependent ERAD pathway1.23E-02
135GO:0009408: response to heat1.24E-02
136GO:0009411: response to UV1.31E-02
137GO:0009753: response to jasmonic acid1.35E-02
138GO:0009306: protein secretion1.39E-02
139GO:0009845: seed germination1.48E-02
140GO:0042631: cellular response to water deprivation1.55E-02
141GO:0042391: regulation of membrane potential1.55E-02
142GO:0000413: protein peptidyl-prolyl isomerization1.55E-02
143GO:0010051: xylem and phloem pattern formation1.55E-02
144GO:0006662: glycerol ether metabolic process1.63E-02
145GO:0046323: glucose import1.63E-02
146GO:0061025: membrane fusion1.72E-02
147GO:0006623: protein targeting to vacuole1.81E-02
148GO:0010183: pollen tube guidance1.81E-02
149GO:0010150: leaf senescence1.89E-02
150GO:0010193: response to ozone1.90E-02
151GO:0030163: protein catabolic process2.08E-02
152GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.11E-02
153GO:0006904: vesicle docking involved in exocytosis2.27E-02
154GO:0051607: defense response to virus2.37E-02
155GO:0009555: pollen development2.55E-02
156GO:0006906: vesicle fusion2.67E-02
157GO:0016049: cell growth2.88E-02
158GO:0048481: plant ovule development2.98E-02
159GO:0010311: lateral root formation3.09E-02
160GO:0009832: plant-type cell wall biogenesis3.09E-02
161GO:0006970: response to osmotic stress3.15E-02
162GO:0048527: lateral root development3.31E-02
163GO:0009631: cold acclimation3.31E-02
164GO:0007568: aging3.31E-02
165GO:0009867: jasmonic acid mediated signaling pathway3.53E-02
166GO:0045087: innate immune response3.53E-02
167GO:0080167: response to karrikin3.62E-02
168GO:0006099: tricarboxylic acid cycle3.64E-02
169GO:0034599: cellular response to oxidative stress3.64E-02
170GO:0006897: endocytosis3.99E-02
171GO:0009965: leaf morphogenesis4.59E-02
172GO:0006855: drug transmembrane transport4.71E-02
173GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process4.84E-02
174GO:0000165: MAPK cascade4.84E-02
RankGO TermAdjusted P value
1GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
2GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
3GO:0052873: FMN reductase (NADPH) activity0.00E+00
4GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity0.00E+00
5GO:0008752: FMN reductase activity0.00E+00
6GO:0005524: ATP binding7.28E-06
7GO:0005460: UDP-glucose transmembrane transporter activity1.50E-05
8GO:0051082: unfolded protein binding2.09E-05
9GO:0005459: UDP-galactose transmembrane transporter activity4.46E-05
10GO:0047631: ADP-ribose diphosphatase activity4.46E-05
11GO:0000210: NAD+ diphosphatase activity6.61E-05
12GO:0008519: ammonium transmembrane transporter activity6.61E-05
13GO:0016301: kinase activity7.05E-05
14GO:0004714: transmembrane receptor protein tyrosine kinase activity1.56E-04
15GO:0004674: protein serine/threonine kinase activity1.82E-04
16GO:1901149: salicylic acid binding1.93E-04
17GO:0080042: ADP-glucose pyrophosphohydrolase activity1.93E-04
18GO:0004048: anthranilate phosphoribosyltransferase activity1.93E-04
19GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity1.93E-04
20GO:0031127: alpha-(1,2)-fucosyltransferase activity1.93E-04
21GO:0030247: polysaccharide binding3.43E-04
22GO:0017110: nucleoside-diphosphatase activity4.33E-04
23GO:0004338: glucan exo-1,3-beta-glucosidase activity4.33E-04
24GO:0080041: ADP-ribose pyrophosphohydrolase activity4.33E-04
25GO:0005388: calcium-transporting ATPase activity5.01E-04
26GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity7.06E-04
27GO:0004148: dihydrolipoyl dehydrogenase activity7.06E-04
28GO:0003955: NAD(P)H dehydrogenase (quinone) activity7.06E-04
29GO:0051287: NAD binding9.29E-04
30GO:0035529: NADH pyrophosphatase activity1.01E-03
31GO:0004449: isocitrate dehydrogenase (NAD+) activity1.01E-03
32GO:0008810: cellulase activity1.11E-03
33GO:0005509: calcium ion binding1.24E-03
34GO:0043495: protein anchor1.34E-03
35GO:0030276: clathrin binding1.51E-03
36GO:0004029: aldehyde dehydrogenase (NAD) activity2.10E-03
37GO:0004602: glutathione peroxidase activity2.52E-03
38GO:0008565: protein transporter activity2.75E-03
39GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity2.96E-03
40GO:0008235: metalloexopeptidase activity2.96E-03
41GO:0008320: protein transmembrane transporter activity2.96E-03
42GO:0043295: glutathione binding2.96E-03
43GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.01E-03
44GO:0005516: calmodulin binding3.16E-03
45GO:0004708: MAP kinase kinase activity3.43E-03
46GO:0008417: fucosyltransferase activity4.44E-03
47GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity4.99E-03
48GO:0004364: glutathione transferase activity5.44E-03
49GO:0004568: chitinase activity5.55E-03
50GO:0005545: 1-phosphatidylinositol binding5.55E-03
51GO:0004713: protein tyrosine kinase activity5.55E-03
52GO:0004177: aminopeptidase activity6.13E-03
53GO:0008559: xenobiotic-transporting ATPase activity6.13E-03
54GO:0005262: calcium channel activity7.36E-03
55GO:0031072: heat shock protein binding7.36E-03
56GO:0042973: glucan endo-1,3-beta-D-glucosidase activity8.01E-03
57GO:0031625: ubiquitin protein ligase binding8.45E-03
58GO:0030552: cAMP binding8.67E-03
59GO:0030553: cGMP binding8.67E-03
60GO:0008061: chitin binding8.67E-03
61GO:0003712: transcription cofactor activity8.67E-03
62GO:0051119: sugar transmembrane transporter activity8.67E-03
63GO:0004190: aspartic-type endopeptidase activity8.67E-03
64GO:0005216: ion channel activity1.08E-02
65GO:0016746: transferase activity, transferring acyl groups1.12E-02
66GO:0004707: MAP kinase activity1.15E-02
67GO:0033612: receptor serine/threonine kinase binding1.15E-02
68GO:0003756: protein disulfide isomerase activity1.39E-02
69GO:0047134: protein-disulfide reductase activity1.47E-02
70GO:0030551: cyclic nucleotide binding1.55E-02
71GO:0005249: voltage-gated potassium channel activity1.55E-02
72GO:0004527: exonuclease activity1.63E-02
73GO:0004791: thioredoxin-disulfide reductase activity1.72E-02
74GO:0005355: glucose transmembrane transporter activity1.72E-02
75GO:0010181: FMN binding1.72E-02
76GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.08E-02
77GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity2.27E-02
78GO:0042802: identical protein binding2.40E-02
79GO:0004806: triglyceride lipase activity2.77E-02
80GO:0015238: drug transmembrane transporter activity3.09E-02
81GO:0004222: metalloendopeptidase activity3.20E-02
82GO:0043531: ADP binding3.20E-02
83GO:0004672: protein kinase activity3.29E-02
84GO:0050897: cobalt ion binding3.31E-02
85GO:0003746: translation elongation factor activity3.53E-02
86GO:0030246: carbohydrate binding3.69E-02
87GO:0000149: SNARE binding3.76E-02
88GO:0004712: protein serine/threonine/tyrosine kinase activity3.76E-02
89GO:0005484: SNAP receptor activity4.23E-02
90GO:0003755: peptidyl-prolyl cis-trans isomerase activity4.71E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane3.20E-17
2GO:0005783: endoplasmic reticulum4.35E-07
3GO:0005788: endoplasmic reticulum lumen6.29E-07
4GO:0005773: vacuole6.48E-05
5GO:0009506: plasmodesma7.34E-05
6GO:0005774: vacuolar membrane2.02E-04
7GO:0030665: clathrin-coated vesicle membrane2.82E-04
8GO:0005901: caveola4.33E-04
9GO:0030134: ER to Golgi transport vesicle4.33E-04
10GO:0030176: integral component of endoplasmic reticulum membrane6.32E-04
11GO:0005795: Golgi stack6.32E-04
12GO:0046658: anchored component of plasma membrane8.53E-04
13GO:0005887: integral component of plasma membrane9.67E-04
14GO:0070062: extracellular exosome1.01E-03
15GO:0016021: integral component of membrane1.19E-03
16GO:0000164: protein phosphatase type 1 complex1.70E-03
17GO:0030173: integral component of Golgi membrane2.52E-03
18GO:0005801: cis-Golgi network2.52E-03
19GO:0031225: anchored component of membrane3.37E-03
20GO:0030131: clathrin adaptor complex3.43E-03
21GO:0005740: mitochondrial envelope5.55E-03
22GO:0017119: Golgi transport complex5.55E-03
23GO:0048046: apoplast6.51E-03
24GO:0031012: extracellular matrix7.36E-03
25GO:0005618: cell wall7.83E-03
26GO:0005794: Golgi apparatus8.70E-03
27GO:0005829: cytosol9.83E-03
28GO:0005741: mitochondrial outer membrane1.15E-02
29GO:0005905: clathrin-coated pit1.15E-02
30GO:0030136: clathrin-coated vesicle1.47E-02
31GO:0005622: intracellular1.53E-02
32GO:0009504: cell plate1.81E-02
33GO:0016592: mediator complex1.99E-02
34GO:0000145: exocyst1.99E-02
35GO:0032580: Golgi cisterna membrane2.18E-02
36GO:0019005: SCF ubiquitin ligase complex2.98E-02
37GO:0000151: ubiquitin ligase complex2.98E-02
38GO:0000325: plant-type vacuole3.31E-02
39GO:0005789: endoplasmic reticulum membrane3.48E-02
40GO:0031201: SNARE complex3.99E-02
41GO:0031902: late endosome membrane3.99E-02
42GO:0016020: membrane4.71E-02
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Gene type



Gene DE type