Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G45600

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090279: regulation of calcium ion import0.00E+00
2GO:1903508: positive regulation of nucleic acid-templated transcription0.00E+00
3GO:0071474: cellular hyperosmotic response0.00E+00
4GO:0070584: mitochondrion morphogenesis0.00E+00
5GO:0080065: 4-alpha-methyl-delta7-sterol oxidation8.86E-06
6GO:0051262: protein tetramerization2.38E-05
7GO:0055129: L-proline biosynthetic process2.38E-05
8GO:1902448: positive regulation of shade avoidance4.33E-05
9GO:2000306: positive regulation of photomorphogenesis9.27E-05
10GO:0016123: xanthophyll biosynthetic process1.21E-04
11GO:0006561: proline biosynthetic process1.52E-04
12GO:0045962: positive regulation of development, heterochronic1.52E-04
13GO:0009416: response to light stimulus1.54E-04
14GO:0007186: G-protein coupled receptor signaling pathway2.91E-04
15GO:0009688: abscisic acid biosynthetic process4.07E-04
16GO:0090351: seedling development6.20E-04
17GO:0006970: response to osmotic stress6.27E-04
18GO:0080167: response to karrikin7.17E-04
19GO:0006874: cellular calcium ion homeostasis7.58E-04
20GO:0010182: sugar mediated signaling pathway1.10E-03
21GO:0006814: sodium ion transport1.16E-03
22GO:0016126: sterol biosynthetic process1.61E-03
23GO:0048573: photoperiodism, flowering1.79E-03
24GO:0009813: flavonoid biosynthetic process1.99E-03
25GO:0006811: ion transport2.05E-03
26GO:0009631: cold acclimation2.12E-03
27GO:0016051: carbohydrate biosynthetic process2.25E-03
28GO:0009637: response to blue light2.25E-03
29GO:0010114: response to red light2.67E-03
30GO:0051707: response to other organism2.67E-03
31GO:0009640: photomorphogenesis2.67E-03
32GO:0009965: leaf morphogenesis2.88E-03
33GO:0042538: hyperosmotic salinity response3.11E-03
34GO:0009414: response to water deprivation3.51E-03
35GO:0009624: response to nematode4.15E-03
36GO:0009409: response to cold4.84E-03
37GO:0009845: seed germination5.10E-03
38GO:0010228: vegetative to reproductive phase transition of meristem6.22E-03
39GO:0009793: embryo development ending in seed dormancy8.27E-03
40GO:0007049: cell cycle8.81E-03
41GO:0048366: leaf development9.15E-03
42GO:0044550: secondary metabolite biosynthetic process1.01E-02
43GO:0009408: response to heat1.25E-02
44GO:0009555: pollen development1.88E-02
45GO:0051301: cell division1.99E-02
46GO:0055085: transmembrane transport2.22E-02
47GO:0006979: response to oxidative stress3.12E-02
48GO:0030154: cell differentiation3.30E-02
49GO:0006810: transport4.08E-02
50GO:0005975: carbohydrate metabolic process4.18E-02
51GO:0046686: response to cadmium ion4.26E-02
RankGO TermAdjusted P value
1GO:0009540: zeaxanthin epoxidase [overall] activity0.00E+00
2GO:0030504: inorganic diphosphate transmembrane transporter activity0.00E+00
3GO:0005227: calcium activated cation channel activity8.86E-06
4GO:0004349: glutamate 5-kinase activity8.86E-06
5GO:0004350: glutamate-5-semialdehyde dehydrogenase activity8.86E-06
6GO:0047216: inositol 3-alpha-galactosyltransferase activity2.38E-05
7GO:0000254: C-4 methylsterol oxidase activity6.64E-05
8GO:0004930: G-protein coupled receptor activity9.27E-05
9GO:0004462: lactoylglutathione lyase activity1.52E-04
10GO:0005261: cation channel activity1.85E-04
11GO:0071949: FAD binding3.29E-04
12GO:0005315: inorganic phosphate transmembrane transporter activity5.33E-04
13GO:0003712: transcription cofactor activity6.20E-04
14GO:0004970: ionotropic glutamate receptor activity6.20E-04
15GO:0005217: intracellular ligand-gated ion channel activity6.20E-04
16GO:0005216: ion channel activity7.58E-04
17GO:0004176: ATP-dependent peptidase activity8.05E-04
18GO:0008514: organic anion transmembrane transporter activity9.51E-04
19GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2.25E-03
20GO:0003993: acid phosphatase activity2.32E-03
21GO:0015293: symporter activity2.88E-03
22GO:0016758: transferase activity, transferring hexosyl groups4.74E-03
23GO:0016829: lyase activity5.10E-03
24GO:0015144: carbohydrate transmembrane transporter activity5.46E-03
25GO:0005351: sugar:proton symporter activity5.93E-03
26GO:0008233: peptidase activity9.37E-03
27GO:0008289: lipid binding1.58E-02
28GO:0003677: DNA binding2.16E-02
29GO:0005506: iron ion binding3.07E-02
30GO:0005215: transporter activity3.33E-02
RankGO TermAdjusted P value
1GO:0009535: chloroplast thylakoid membrane8.00E-03
2GO:0080008: Cul4-RING E3 ubiquitin ligase complex8.70E-03
3GO:0031969: chloroplast membrane9.48E-03
4GO:0016021: integral component of membrane1.08E-02
5GO:0009941: chloroplast envelope1.69E-02
6GO:0005777: peroxisome2.07E-02
7GO:0009579: thylakoid2.13E-02
8GO:0031225: anchored component of membrane2.57E-02
9GO:0009507: chloroplast3.92E-02
10GO:0005789: endoplasmic reticulum membrane4.20E-02
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Gene type



Gene DE type