GO Enrichment Analysis of Co-expressed Genes with
AT3G44990
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042425: choline biosynthetic process | 0.00E+00 |
| 2 | GO:1900000: regulation of anthocyanin catabolic process | 0.00E+00 |
| 3 | GO:1905421: regulation of plant organ morphogenesis | 0.00E+00 |
| 4 | GO:0030155: regulation of cell adhesion | 0.00E+00 |
| 5 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 6 | GO:0090391: granum assembly | 4.06E-07 |
| 7 | GO:0010480: microsporocyte differentiation | 4.04E-05 |
| 8 | GO:0031338: regulation of vesicle fusion | 4.04E-05 |
| 9 | GO:0034337: RNA folding | 4.04E-05 |
| 10 | GO:0005980: glycogen catabolic process | 4.04E-05 |
| 11 | GO:0010207: photosystem II assembly | 6.26E-05 |
| 12 | GO:0035304: regulation of protein dephosphorylation | 1.00E-04 |
| 13 | GO:0018026: peptidyl-lysine monomethylation | 1.00E-04 |
| 14 | GO:0045493: xylan catabolic process | 1.73E-04 |
| 15 | GO:0090630: activation of GTPase activity | 1.73E-04 |
| 16 | GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement | 1.73E-04 |
| 17 | GO:0048281: inflorescence morphogenesis | 1.73E-04 |
| 18 | GO:1902448: positive regulation of shade avoidance | 1.73E-04 |
| 19 | GO:0010148: transpiration | 2.55E-04 |
| 20 | GO:0010438: cellular response to sulfur starvation | 4.37E-04 |
| 21 | GO:0006656: phosphatidylcholine biosynthetic process | 4.37E-04 |
| 22 | GO:0006655: phosphatidylglycerol biosynthetic process | 5.37E-04 |
| 23 | GO:0010190: cytochrome b6f complex assembly | 5.37E-04 |
| 24 | GO:0009759: indole glucosinolate biosynthetic process | 5.37E-04 |
| 25 | GO:0042549: photosystem II stabilization | 5.37E-04 |
| 26 | GO:1901259: chloroplast rRNA processing | 6.40E-04 |
| 27 | GO:0070370: cellular heat acclimation | 7.49E-04 |
| 28 | GO:0010103: stomatal complex morphogenesis | 7.49E-04 |
| 29 | GO:0048528: post-embryonic root development | 7.49E-04 |
| 30 | GO:0048437: floral organ development | 7.49E-04 |
| 31 | GO:0010196: nonphotochemical quenching | 7.49E-04 |
| 32 | GO:0009690: cytokinin metabolic process | 8.61E-04 |
| 33 | GO:0019827: stem cell population maintenance | 8.61E-04 |
| 34 | GO:0009664: plant-type cell wall organization | 9.12E-04 |
| 35 | GO:0001558: regulation of cell growth | 9.77E-04 |
| 36 | GO:0032544: plastid translation | 9.77E-04 |
| 37 | GO:0010206: photosystem II repair | 1.10E-03 |
| 38 | GO:0010205: photoinhibition | 1.22E-03 |
| 39 | GO:0009742: brassinosteroid mediated signaling pathway | 1.44E-03 |
| 40 | GO:0019684: photosynthesis, light reaction | 1.49E-03 |
| 41 | GO:1903507: negative regulation of nucleic acid-templated transcription | 1.49E-03 |
| 42 | GO:0048229: gametophyte development | 1.49E-03 |
| 43 | GO:0046856: phosphatidylinositol dephosphorylation | 1.49E-03 |
| 44 | GO:0009735: response to cytokinin | 1.58E-03 |
| 45 | GO:0002213: defense response to insect | 1.63E-03 |
| 46 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.63E-03 |
| 47 | GO:0010075: regulation of meristem growth | 1.77E-03 |
| 48 | GO:0009266: response to temperature stimulus | 1.92E-03 |
| 49 | GO:0009934: regulation of meristem structural organization | 1.92E-03 |
| 50 | GO:0000162: tryptophan biosynthetic process | 2.23E-03 |
| 51 | GO:0009944: polarity specification of adaxial/abaxial axis | 2.39E-03 |
| 52 | GO:0051302: regulation of cell division | 2.55E-03 |
| 53 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 2.89E-03 |
| 54 | GO:0030245: cellulose catabolic process | 2.89E-03 |
| 55 | GO:0001944: vasculature development | 3.06E-03 |
| 56 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 3.06E-03 |
| 57 | GO:0009826: unidimensional cell growth | 3.44E-03 |
| 58 | GO:0080022: primary root development | 3.61E-03 |
| 59 | GO:0048653: anther development | 3.61E-03 |
| 60 | GO:0042631: cellular response to water deprivation | 3.61E-03 |
| 61 | GO:0010183: pollen tube guidance | 4.19E-03 |
| 62 | GO:0000302: response to reactive oxygen species | 4.38E-03 |
| 63 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.57E-03 |
| 64 | GO:0009828: plant-type cell wall loosening | 5.00E-03 |
| 65 | GO:0015979: photosynthesis | 5.04E-03 |
| 66 | GO:0010027: thylakoid membrane organization | 5.64E-03 |
| 67 | GO:0032259: methylation | 6.23E-03 |
| 68 | GO:0010411: xyloglucan metabolic process | 6.31E-03 |
| 69 | GO:0015995: chlorophyll biosynthetic process | 6.31E-03 |
| 70 | GO:0000160: phosphorelay signal transduction system | 7.01E-03 |
| 71 | GO:0034599: cellular response to oxidative stress | 8.24E-03 |
| 72 | GO:0009965: leaf morphogenesis | 1.03E-02 |
| 73 | GO:0031347: regulation of defense response | 1.09E-02 |
| 74 | GO:0009736: cytokinin-activated signaling pathway | 1.18E-02 |
| 75 | GO:0006364: rRNA processing | 1.18E-02 |
| 76 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.20E-02 |
| 77 | GO:0048316: seed development | 1.35E-02 |
| 78 | GO:0006468: protein phosphorylation | 1.66E-02 |
| 79 | GO:0042744: hydrogen peroxide catabolic process | 1.94E-02 |
| 80 | GO:0009414: response to water deprivation | 2.29E-02 |
| 81 | GO:0071555: cell wall organization | 2.35E-02 |
| 82 | GO:0042742: defense response to bacterium | 2.35E-02 |
| 83 | GO:0007166: cell surface receptor signaling pathway | 2.45E-02 |
| 84 | GO:0030154: cell differentiation | 2.56E-02 |
| 85 | GO:0009409: response to cold | 3.18E-02 |
| 86 | GO:0009860: pollen tube growth | 3.20E-02 |
| 87 | GO:0080167: response to karrikin | 3.54E-02 |
| 88 | GO:0010200: response to chitin | 3.63E-02 |
| 89 | GO:0006886: intracellular protein transport | 4.11E-02 |
| 90 | GO:0016042: lipid catabolic process | 4.57E-02 |
| 91 | GO:0006629: lipid metabolic process | 4.67E-02 |
| 92 | GO:0009753: response to jasmonic acid | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 2 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 3 | GO:0004645: phosphorylase activity | 4.04E-05 |
| 4 | GO:0080062: cytokinin 9-beta-glucosyltransferase activity | 4.04E-05 |
| 5 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 4.04E-05 |
| 6 | GO:0047807: cytokinin 7-beta-glucosyltransferase activity | 4.04E-05 |
| 7 | GO:0008184: glycogen phosphorylase activity | 4.04E-05 |
| 8 | GO:0010242: oxygen evolving activity | 4.04E-05 |
| 9 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 1.00E-04 |
| 10 | GO:0004445: inositol-polyphosphate 5-phosphatase activity | 2.55E-04 |
| 11 | GO:0016851: magnesium chelatase activity | 2.55E-04 |
| 12 | GO:0009044: xylan 1,4-beta-xylosidase activity | 3.43E-04 |
| 13 | GO:0042277: peptide binding | 3.43E-04 |
| 14 | GO:0046556: alpha-L-arabinofuranosidase activity | 3.43E-04 |
| 15 | GO:0016279: protein-lysine N-methyltransferase activity | 3.43E-04 |
| 16 | GO:0019199: transmembrane receptor protein kinase activity | 3.43E-04 |
| 17 | GO:0017137: Rab GTPase binding | 4.37E-04 |
| 18 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 5.37E-04 |
| 19 | GO:0004130: cytochrome-c peroxidase activity | 5.37E-04 |
| 20 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 5.37E-04 |
| 21 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 8.61E-04 |
| 22 | GO:0047372: acylglycerol lipase activity | 1.49E-03 |
| 23 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 1.63E-03 |
| 24 | GO:0019843: rRNA binding | 1.70E-03 |
| 25 | GO:0031072: heat shock protein binding | 1.77E-03 |
| 26 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.92E-03 |
| 27 | GO:0008266: poly(U) RNA binding | 1.92E-03 |
| 28 | GO:0005528: FK506 binding | 2.39E-03 |
| 29 | GO:0003714: transcription corepressor activity | 2.39E-03 |
| 30 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.50E-03 |
| 31 | GO:0033612: receptor serine/threonine kinase binding | 2.72E-03 |
| 32 | GO:0008810: cellulase activity | 3.06E-03 |
| 33 | GO:0003756: protein disulfide isomerase activity | 3.24E-03 |
| 34 | GO:0008168: methyltransferase activity | 3.44E-03 |
| 35 | GO:0000156: phosphorelay response regulator activity | 4.79E-03 |
| 36 | GO:0005096: GTPase activator activity | 7.01E-03 |
| 37 | GO:0004185: serine-type carboxypeptidase activity | 9.53E-03 |
| 38 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.06E-02 |
| 39 | GO:0016787: hydrolase activity | 1.13E-02 |
| 40 | GO:0003777: microtubule motor activity | 1.26E-02 |
| 41 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.41E-02 |
| 42 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.41E-02 |
| 43 | GO:0051082: unfolded protein binding | 1.51E-02 |
| 44 | GO:0030246: carbohydrate binding | 1.56E-02 |
| 45 | GO:0008026: ATP-dependent helicase activity | 1.57E-02 |
| 46 | GO:0030170: pyridoxal phosphate binding | 1.91E-02 |
| 47 | GO:0004252: serine-type endopeptidase activity | 1.91E-02 |
| 48 | GO:0016757: transferase activity, transferring glycosyl groups | 2.03E-02 |
| 49 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.12E-02 |
| 50 | GO:0008194: UDP-glycosyltransferase activity | 2.41E-02 |
| 51 | GO:0004601: peroxidase activity | 3.04E-02 |
| 52 | GO:0016788: hydrolase activity, acting on ester bonds | 3.08E-02 |
| 53 | GO:0003729: mRNA binding | 3.49E-02 |
| 54 | GO:0052689: carboxylic ester hydrolase activity | 3.80E-02 |
| 55 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 4.02E-02 |
| 56 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 4.34E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009534: chloroplast thylakoid | 3.81E-12 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 2.54E-09 |
| 3 | GO:0009507: chloroplast | 7.68E-09 |
| 4 | GO:0009543: chloroplast thylakoid lumen | 1.60E-07 |
| 5 | GO:0009570: chloroplast stroma | 4.07E-06 |
| 6 | GO:0009579: thylakoid | 3.52E-05 |
| 7 | GO:0009515: granal stacked thylakoid | 4.04E-05 |
| 8 | GO:0010007: magnesium chelatase complex | 1.73E-04 |
| 9 | GO:0042646: plastid nucleoid | 2.55E-04 |
| 10 | GO:0055035: plastid thylakoid membrane | 4.37E-04 |
| 11 | GO:0016363: nuclear matrix | 6.40E-04 |
| 12 | GO:0031977: thylakoid lumen | 6.80E-04 |
| 13 | GO:0009538: photosystem I reaction center | 8.61E-04 |
| 14 | GO:0010287: plastoglobule | 1.61E-03 |
| 15 | GO:0032040: small-subunit processome | 1.63E-03 |
| 16 | GO:0030095: chloroplast photosystem II | 1.92E-03 |
| 17 | GO:0009654: photosystem II oxygen evolving complex | 2.55E-03 |
| 18 | GO:0019898: extrinsic component of membrane | 4.19E-03 |
| 19 | GO:0009536: plastid | 5.57E-03 |
| 20 | GO:0012505: endomembrane system | 1.48E-02 |
| 21 | GO:0009706: chloroplast inner membrane | 1.51E-02 |
| 22 | GO:0005618: cell wall | 2.46E-02 |
| 23 | GO:0009505: plant-type cell wall | 2.94E-02 |
| 24 | GO:0009941: chloroplast envelope | 3.05E-02 |
| 25 | GO:0005576: extracellular region | 3.42E-02 |