GO Enrichment Analysis of Co-expressed Genes with
AT3G44620
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 2 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 3 | GO:0010196: nonphotochemical quenching | 6.47E-09 |
| 4 | GO:0015979: photosynthesis | 8.37E-06 |
| 5 | GO:0010027: thylakoid membrane organization | 1.30E-04 |
| 6 | GO:2001141: regulation of RNA biosynthetic process | 1.30E-04 |
| 7 | GO:0006020: inositol metabolic process | 1.30E-04 |
| 8 | GO:0006021: inositol biosynthetic process | 1.78E-04 |
| 9 | GO:0015976: carbon utilization | 1.78E-04 |
| 10 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 2.85E-04 |
| 11 | GO:0042549: photosystem II stabilization | 2.85E-04 |
| 12 | GO:0046855: inositol phosphate dephosphorylation | 2.85E-04 |
| 13 | GO:0009645: response to low light intensity stimulus | 4.02E-04 |
| 14 | GO:0006096: glycolytic process | 4.56E-04 |
| 15 | GO:0071482: cellular response to light stimulus | 5.27E-04 |
| 16 | GO:0006352: DNA-templated transcription, initiation | 8.02E-04 |
| 17 | GO:0009773: photosynthetic electron transport in photosystem I | 8.02E-04 |
| 18 | GO:0006790: sulfur compound metabolic process | 8.75E-04 |
| 19 | GO:0006006: glucose metabolic process | 9.49E-04 |
| 20 | GO:0009767: photosynthetic electron transport chain | 9.49E-04 |
| 21 | GO:0010207: photosystem II assembly | 1.02E-03 |
| 22 | GO:0019253: reductive pentose-phosphate cycle | 1.02E-03 |
| 23 | GO:0046854: phosphatidylinositol phosphorylation | 1.10E-03 |
| 24 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.35E-03 |
| 25 | GO:0016226: iron-sulfur cluster assembly | 1.52E-03 |
| 26 | GO:0009561: megagametogenesis | 1.70E-03 |
| 27 | GO:0080167: response to karrikin | 1.71E-03 |
| 28 | GO:0007264: small GTPase mediated signal transduction | 2.40E-03 |
| 29 | GO:0009607: response to biotic stimulus | 3.05E-03 |
| 30 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 3.05E-03 |
| 31 | GO:0042128: nitrate assimilation | 3.16E-03 |
| 32 | GO:0018298: protein-chromophore linkage | 3.51E-03 |
| 33 | GO:0009735: response to cytokinin | 4.03E-03 |
| 34 | GO:0009637: response to blue light | 4.13E-03 |
| 35 | GO:0009416: response to light stimulus | 4.40E-03 |
| 36 | GO:0006631: fatty acid metabolic process | 4.64E-03 |
| 37 | GO:0010114: response to red light | 4.91E-03 |
| 38 | GO:0009744: response to sucrose | 4.91E-03 |
| 39 | GO:0009644: response to high light intensity | 5.18E-03 |
| 40 | GO:0006855: drug transmembrane transport | 5.46E-03 |
| 41 | GO:0009664: plant-type cell wall organization | 5.74E-03 |
| 42 | GO:0009409: response to cold | 1.21E-02 |
| 43 | GO:0009658: chloroplast organization | 1.54E-02 |
| 44 | GO:0042254: ribosome biogenesis | 1.56E-02 |
| 45 | GO:0045454: cell redox homeostasis | 2.03E-02 |
| 46 | GO:0032259: methylation | 2.29E-02 |
| 47 | GO:0006629: lipid metabolic process | 2.36E-02 |
| 48 | GO:0009408: response to heat | 2.36E-02 |
| 49 | GO:0008152: metabolic process | 2.53E-02 |
| 50 | GO:0009611: response to wounding | 3.61E-02 |
| 51 | GO:0055085: transmembrane transport | 4.21E-02 |
| 52 | GO:0006457: protein folding | 4.27E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 2 | GO:0051738: xanthophyll binding | 0.00E+00 |
| 3 | GO:0031072: heat shock protein binding | 1.71E-05 |
| 4 | GO:0009496: plastoquinol--plastocyanin reductase activity | 1.87E-05 |
| 5 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 1.87E-05 |
| 6 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 1.87E-05 |
| 7 | GO:0019903: protein phosphatase binding | 4.85E-05 |
| 8 | GO:0004047: aminomethyltransferase activity | 4.85E-05 |
| 9 | GO:0052832: inositol monophosphate 3-phosphatase activity | 4.85E-05 |
| 10 | GO:0008934: inositol monophosphate 1-phosphatase activity | 4.85E-05 |
| 11 | GO:0052833: inositol monophosphate 4-phosphatase activity | 4.85E-05 |
| 12 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 4.85E-05 |
| 13 | GO:0008967: phosphoglycolate phosphatase activity | 4.85E-05 |
| 14 | GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | 8.61E-05 |
| 15 | GO:0004300: enoyl-CoA hydratase activity | 1.30E-04 |
| 16 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 1.30E-04 |
| 17 | GO:0016168: chlorophyll binding | 1.37E-04 |
| 18 | GO:0001053: plastid sigma factor activity | 1.78E-04 |
| 19 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 1.78E-04 |
| 20 | GO:0016987: sigma factor activity | 1.78E-04 |
| 21 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.11E-04 |
| 22 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 3.42E-04 |
| 23 | GO:0004033: aldo-keto reductase (NADP) activity | 4.64E-04 |
| 24 | GO:0051082: unfolded protein binding | 5.45E-04 |
| 25 | GO:0047372: acylglycerol lipase activity | 8.02E-04 |
| 26 | GO:0004089: carbonate dehydratase activity | 9.49E-04 |
| 27 | GO:0031409: pigment binding | 1.18E-03 |
| 28 | GO:0022891: substrate-specific transmembrane transporter activity | 1.61E-03 |
| 29 | GO:0019901: protein kinase binding | 2.19E-03 |
| 30 | GO:0015238: drug transmembrane transporter activity | 3.63E-03 |
| 31 | GO:0050661: NADP binding | 4.51E-03 |
| 32 | GO:0051287: NAD binding | 5.60E-03 |
| 33 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 6.02E-03 |
| 34 | GO:0016874: ligase activity | 7.38E-03 |
| 35 | GO:0019843: rRNA binding | 8.99E-03 |
| 36 | GO:0015297: antiporter activity | 1.09E-02 |
| 37 | GO:0046872: metal ion binding | 1.19E-02 |
| 38 | GO:0008168: methyltransferase activity | 1.50E-02 |
| 39 | GO:0042803: protein homodimerization activity | 2.10E-02 |
| 40 | GO:0003924: GTPase activity | 2.36E-02 |
| 41 | GO:0016740: transferase activity | 4.09E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.92E-15 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 3.58E-13 |
| 4 | GO:0009534: chloroplast thylakoid | 2.76E-09 |
| 5 | GO:0009941: chloroplast envelope | 1.17E-08 |
| 6 | GO:0009570: chloroplast stroma | 8.23E-07 |
| 7 | GO:0009579: thylakoid | 3.12E-06 |
| 8 | GO:0009782: photosystem I antenna complex | 1.87E-05 |
| 9 | GO:0009523: photosystem II | 7.95E-05 |
| 10 | GO:0009531: secondary cell wall | 1.30E-04 |
| 11 | GO:0009517: PSII associated light-harvesting complex II | 1.78E-04 |
| 12 | GO:0009512: cytochrome b6f complex | 2.30E-04 |
| 13 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 5.93E-04 |
| 14 | GO:0030076: light-harvesting complex | 1.10E-03 |
| 15 | GO:0042651: thylakoid membrane | 1.35E-03 |
| 16 | GO:0009654: photosystem II oxygen evolving complex | 1.35E-03 |
| 17 | GO:0015935: small ribosomal subunit | 1.44E-03 |
| 18 | GO:0031969: chloroplast membrane | 1.71E-03 |
| 19 | GO:0019898: extrinsic component of membrane | 2.19E-03 |
| 20 | GO:0010319: stromule | 2.72E-03 |
| 21 | GO:0031977: thylakoid lumen | 4.64E-03 |
| 22 | GO:0005856: cytoskeleton | 5.32E-03 |
| 23 | GO:0010287: plastoglobule | 8.66E-03 |
| 24 | GO:0009543: chloroplast thylakoid lumen | 8.99E-03 |
| 25 | GO:0016020: membrane | 2.28E-02 |