GO Enrichment Analysis of Co-expressed Genes with
AT3G44020
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0080114: positive regulation of glycine hydroxymethyltransferase activity | 0.00E+00 |
| 2 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 3 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 4 | GO:0090393: sepal giant cell development | 0.00E+00 |
| 5 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 6 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 7 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 8 | GO:0009773: photosynthetic electron transport in photosystem I | 1.09E-11 |
| 9 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 4.58E-08 |
| 10 | GO:0006810: transport | 1.12E-06 |
| 11 | GO:0015979: photosynthesis | 5.00E-06 |
| 12 | GO:0006094: gluconeogenesis | 2.00E-05 |
| 13 | GO:0009704: de-etiolation | 1.56E-04 |
| 14 | GO:0009658: chloroplast organization | 1.82E-04 |
| 15 | GO:0030974: thiamine pyrophosphate transport | 1.93E-04 |
| 16 | GO:0046900: tetrahydrofolylpolyglutamate metabolic process | 1.93E-04 |
| 17 | GO:1904966: positive regulation of vitamin E biosynthetic process | 1.93E-04 |
| 18 | GO:1904964: positive regulation of phytol biosynthetic process | 1.93E-04 |
| 19 | GO:1902458: positive regulation of stomatal opening | 1.93E-04 |
| 20 | GO:0051775: response to redox state | 1.93E-04 |
| 21 | GO:0051180: vitamin transport | 1.93E-04 |
| 22 | GO:0009443: pyridoxal 5'-phosphate salvage | 1.93E-04 |
| 23 | GO:0071277: cellular response to calcium ion | 1.93E-04 |
| 24 | GO:0006098: pentose-phosphate shunt | 2.36E-04 |
| 25 | GO:1900865: chloroplast RNA modification | 2.82E-04 |
| 26 | GO:0018298: protein-chromophore linkage | 3.92E-04 |
| 27 | GO:0097054: L-glutamate biosynthetic process | 4.33E-04 |
| 28 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 4.33E-04 |
| 29 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 4.33E-04 |
| 30 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 4.33E-04 |
| 31 | GO:0015893: drug transport | 4.33E-04 |
| 32 | GO:0034755: iron ion transmembrane transport | 4.33E-04 |
| 33 | GO:0080005: photosystem stoichiometry adjustment | 4.33E-04 |
| 34 | GO:0009853: photorespiration | 5.32E-04 |
| 35 | GO:0019253: reductive pentose-phosphate cycle | 5.65E-04 |
| 36 | GO:0010207: photosystem II assembly | 5.65E-04 |
| 37 | GO:0006954: inflammatory response | 7.06E-04 |
| 38 | GO:0005977: glycogen metabolic process | 7.06E-04 |
| 39 | GO:0006011: UDP-glucose metabolic process | 7.06E-04 |
| 40 | GO:0000913: preprophase band assembly | 7.06E-04 |
| 41 | GO:0031022: nuclear migration along microfilament | 7.06E-04 |
| 42 | GO:0006000: fructose metabolic process | 7.06E-04 |
| 43 | GO:0009644: response to high light intensity | 8.08E-04 |
| 44 | GO:0032877: positive regulation of DNA endoreduplication | 1.01E-03 |
| 45 | GO:0046836: glycolipid transport | 1.01E-03 |
| 46 | GO:0071484: cellular response to light intensity | 1.01E-03 |
| 47 | GO:0006107: oxaloacetate metabolic process | 1.01E-03 |
| 48 | GO:0016556: mRNA modification | 1.01E-03 |
| 49 | GO:0006537: glutamate biosynthetic process | 1.01E-03 |
| 50 | GO:0016226: iron-sulfur cluster assembly | 1.02E-03 |
| 51 | GO:0006734: NADH metabolic process | 1.34E-03 |
| 52 | GO:0019676: ammonia assimilation cycle | 1.34E-03 |
| 53 | GO:0009765: photosynthesis, light harvesting | 1.34E-03 |
| 54 | GO:0031122: cytoplasmic microtubule organization | 1.34E-03 |
| 55 | GO:0010117: photoprotection | 1.70E-03 |
| 56 | GO:0006564: L-serine biosynthetic process | 1.70E-03 |
| 57 | GO:0009904: chloroplast accumulation movement | 1.70E-03 |
| 58 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.70E-03 |
| 59 | GO:0043097: pyrimidine nucleoside salvage | 1.70E-03 |
| 60 | GO:0010942: positive regulation of cell death | 2.10E-03 |
| 61 | GO:0010405: arabinogalactan protein metabolic process | 2.10E-03 |
| 62 | GO:0042549: photosystem II stabilization | 2.10E-03 |
| 63 | GO:0016554: cytidine to uridine editing | 2.10E-03 |
| 64 | GO:0006206: pyrimidine nucleobase metabolic process | 2.10E-03 |
| 65 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 2.10E-03 |
| 66 | GO:0006458: 'de novo' protein folding | 2.52E-03 |
| 67 | GO:0009903: chloroplast avoidance movement | 2.52E-03 |
| 68 | GO:0009854: oxidative photosynthetic carbon pathway | 2.52E-03 |
| 69 | GO:0071333: cellular response to glucose stimulus | 2.52E-03 |
| 70 | GO:0042026: protein refolding | 2.52E-03 |
| 71 | GO:0010027: thylakoid membrane organization | 2.67E-03 |
| 72 | GO:0009645: response to low light intensity stimulus | 2.96E-03 |
| 73 | GO:0010196: nonphotochemical quenching | 2.96E-03 |
| 74 | GO:2000070: regulation of response to water deprivation | 3.43E-03 |
| 75 | GO:0052543: callose deposition in cell wall | 3.43E-03 |
| 76 | GO:0048564: photosystem I assembly | 3.43E-03 |
| 77 | GO:0017004: cytochrome complex assembly | 3.93E-03 |
| 78 | GO:0006002: fructose 6-phosphate metabolic process | 3.93E-03 |
| 79 | GO:0071482: cellular response to light stimulus | 3.93E-03 |
| 80 | GO:0015996: chlorophyll catabolic process | 3.93E-03 |
| 81 | GO:0007186: G-protein coupled receptor signaling pathway | 3.93E-03 |
| 82 | GO:0055114: oxidation-reduction process | 4.32E-03 |
| 83 | GO:0090333: regulation of stomatal closure | 4.44E-03 |
| 84 | GO:0000373: Group II intron splicing | 4.44E-03 |
| 85 | GO:0000902: cell morphogenesis | 4.44E-03 |
| 86 | GO:0009821: alkaloid biosynthetic process | 4.44E-03 |
| 87 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 4.44E-03 |
| 88 | GO:0019538: protein metabolic process | 5.55E-03 |
| 89 | GO:0006879: cellular iron ion homeostasis | 6.13E-03 |
| 90 | GO:0018119: peptidyl-cysteine S-nitrosylation | 6.13E-03 |
| 91 | GO:0045037: protein import into chloroplast stroma | 6.73E-03 |
| 92 | GO:0006108: malate metabolic process | 7.36E-03 |
| 93 | GO:0009767: photosynthetic electron transport chain | 7.36E-03 |
| 94 | GO:0005986: sucrose biosynthetic process | 7.36E-03 |
| 95 | GO:0006541: glutamine metabolic process | 8.01E-03 |
| 96 | GO:0042343: indole glucosinolate metabolic process | 8.67E-03 |
| 97 | GO:0006096: glycolytic process | 9.03E-03 |
| 98 | GO:0006636: unsaturated fatty acid biosynthetic process | 9.35E-03 |
| 99 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.08E-02 |
| 100 | GO:0016575: histone deacetylation | 1.08E-02 |
| 101 | GO:0007017: microtubule-based process | 1.08E-02 |
| 102 | GO:0098542: defense response to other organism | 1.15E-02 |
| 103 | GO:0061077: chaperone-mediated protein folding | 1.15E-02 |
| 104 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.23E-02 |
| 105 | GO:0080092: regulation of pollen tube growth | 1.23E-02 |
| 106 | GO:0006730: one-carbon metabolic process | 1.23E-02 |
| 107 | GO:0006817: phosphate ion transport | 1.39E-02 |
| 108 | GO:0009058: biosynthetic process | 1.44E-02 |
| 109 | GO:0042631: cellular response to water deprivation | 1.55E-02 |
| 110 | GO:0006520: cellular amino acid metabolic process | 1.63E-02 |
| 111 | GO:0010182: sugar mediated signaling pathway | 1.63E-02 |
| 112 | GO:0015986: ATP synthesis coupled proton transport | 1.72E-02 |
| 113 | GO:0007018: microtubule-based movement | 1.72E-02 |
| 114 | GO:0006814: sodium ion transport | 1.72E-02 |
| 115 | GO:0019252: starch biosynthetic process | 1.81E-02 |
| 116 | GO:0009791: post-embryonic development | 1.81E-02 |
| 117 | GO:0042742: defense response to bacterium | 1.86E-02 |
| 118 | GO:0080156: mitochondrial mRNA modification | 1.90E-02 |
| 119 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.90E-02 |
| 120 | GO:0016032: viral process | 1.99E-02 |
| 121 | GO:0009735: response to cytokinin | 2.28E-02 |
| 122 | GO:0000910: cytokinesis | 2.37E-02 |
| 123 | GO:0001666: response to hypoxia | 2.47E-02 |
| 124 | GO:0009817: defense response to fungus, incompatible interaction | 2.98E-02 |
| 125 | GO:0055085: transmembrane transport | 3.43E-02 |
| 126 | GO:0016051: carbohydrate biosynthetic process | 3.53E-02 |
| 127 | GO:0080167: response to karrikin | 3.62E-02 |
| 128 | GO:0006099: tricarboxylic acid cycle | 3.64E-02 |
| 129 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.74E-02 |
| 130 | GO:0006839: mitochondrial transport | 3.87E-02 |
| 131 | GO:0009744: response to sucrose | 4.23E-02 |
| 132 | GO:0051707: response to other organism | 4.23E-02 |
| 133 | GO:0000209: protein polyubiquitination | 4.35E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 2 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 3 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 4 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 5 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 6 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 7 | GO:1990534: thermospermine oxidase activity | 0.00E+00 |
| 8 | GO:0051738: xanthophyll binding | 0.00E+00 |
| 9 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 10 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 11 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 12 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 13 | GO:0009673: low-affinity phosphate transmembrane transporter activity | 0.00E+00 |
| 14 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 15 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 16 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 17 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.34E-07 |
| 18 | GO:0048038: quinone binding | 7.57E-06 |
| 19 | GO:0016168: chlorophyll binding | 1.86E-05 |
| 20 | GO:0004332: fructose-bisphosphate aldolase activity | 6.61E-05 |
| 21 | GO:0022891: substrate-specific transmembrane transporter activity | 7.56E-05 |
| 22 | GO:0004033: aldo-keto reductase (NADP) activity | 1.56E-04 |
| 23 | GO:0008568: microtubule-severing ATPase activity | 1.93E-04 |
| 24 | GO:0005080: protein kinase C binding | 1.93E-04 |
| 25 | GO:0008242: omega peptidase activity | 1.93E-04 |
| 26 | GO:0008746: NAD(P)+ transhydrogenase activity | 1.93E-04 |
| 27 | GO:0016041: glutamate synthase (ferredoxin) activity | 1.93E-04 |
| 28 | GO:0090422: thiamine pyrophosphate transporter activity | 1.93E-04 |
| 29 | GO:0003867: 4-aminobutyrate transaminase activity | 1.93E-04 |
| 30 | GO:0034722: gamma-glutamyl-peptidase activity | 4.33E-04 |
| 31 | GO:0004617: phosphoglycerate dehydrogenase activity | 4.33E-04 |
| 32 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 4.33E-04 |
| 33 | GO:0008967: phosphoglycolate phosphatase activity | 4.33E-04 |
| 34 | GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity | 7.06E-04 |
| 35 | GO:0070402: NADPH binding | 7.06E-04 |
| 36 | GO:0032947: protein complex scaffold | 7.06E-04 |
| 37 | GO:0051536: iron-sulfur cluster binding | 7.77E-04 |
| 38 | GO:0004176: ATP-dependent peptidase activity | 9.35E-04 |
| 39 | GO:0048487: beta-tubulin binding | 1.01E-03 |
| 40 | GO:0008508: bile acid:sodium symporter activity | 1.01E-03 |
| 41 | GO:0017089: glycolipid transporter activity | 1.01E-03 |
| 42 | GO:0051861: glycolipid binding | 1.34E-03 |
| 43 | GO:0008453: alanine-glyoxylate transaminase activity | 1.34E-03 |
| 44 | GO:0043495: protein anchor | 1.34E-03 |
| 45 | GO:0051538: 3 iron, 4 sulfur cluster binding | 1.70E-03 |
| 46 | GO:0016615: malate dehydrogenase activity | 2.10E-03 |
| 47 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 2.10E-03 |
| 48 | GO:0042578: phosphoric ester hydrolase activity | 2.10E-03 |
| 49 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 2.52E-03 |
| 50 | GO:0030060: L-malate dehydrogenase activity | 2.52E-03 |
| 51 | GO:0004849: uridine kinase activity | 2.52E-03 |
| 52 | GO:0019899: enzyme binding | 2.96E-03 |
| 53 | GO:0008135: translation factor activity, RNA binding | 3.93E-03 |
| 54 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 3.93E-03 |
| 55 | GO:0015078: hydrogen ion transmembrane transporter activity | 3.93E-03 |
| 56 | GO:0016844: strictosidine synthase activity | 4.99E-03 |
| 57 | GO:0005381: iron ion transmembrane transporter activity | 4.99E-03 |
| 58 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 6.13E-03 |
| 59 | GO:0044183: protein binding involved in protein folding | 6.13E-03 |
| 60 | GO:0047372: acylglycerol lipase activity | 6.13E-03 |
| 61 | GO:0004860: protein kinase inhibitor activity | 6.13E-03 |
| 62 | GO:0005198: structural molecule activity | 6.36E-03 |
| 63 | GO:0051287: NAD binding | 6.85E-03 |
| 64 | GO:0005315: inorganic phosphate transmembrane transporter activity | 7.36E-03 |
| 65 | GO:0004089: carbonate dehydratase activity | 7.36E-03 |
| 66 | GO:0031072: heat shock protein binding | 7.36E-03 |
| 67 | GO:0008131: primary amine oxidase activity | 8.01E-03 |
| 68 | GO:0008266: poly(U) RNA binding | 8.01E-03 |
| 69 | GO:0003777: microtubule motor activity | 8.45E-03 |
| 70 | GO:0016491: oxidoreductase activity | 8.59E-03 |
| 71 | GO:0008146: sulfotransferase activity | 8.67E-03 |
| 72 | GO:0031409: pigment binding | 9.35E-03 |
| 73 | GO:0004407: histone deacetylase activity | 1.01E-02 |
| 74 | GO:0043424: protein histidine kinase binding | 1.08E-02 |
| 75 | GO:0051082: unfolded protein binding | 1.09E-02 |
| 76 | GO:0004519: endonuclease activity | 1.38E-02 |
| 77 | GO:0004518: nuclease activity | 1.99E-02 |
| 78 | GO:0005215: transporter activity | 2.17E-02 |
| 79 | GO:0016759: cellulose synthase activity | 2.18E-02 |
| 80 | GO:0016597: amino acid binding | 2.37E-02 |
| 81 | GO:0008168: methyltransferase activity | 2.81E-02 |
| 82 | GO:0016788: hydrolase activity, acting on ester bonds | 2.98E-02 |
| 83 | GO:0004222: metalloendopeptidase activity | 3.20E-02 |
| 84 | GO:0003723: RNA binding | 3.22E-02 |
| 85 | GO:0003746: translation elongation factor activity | 3.53E-02 |
| 86 | GO:0008233: peptidase activity | 3.56E-02 |
| 87 | GO:0043621: protein self-association | 4.47E-02 |
| 88 | GO:0042803: protein homodimerization activity | 4.53E-02 |
| 89 | GO:0015293: symporter activity | 4.59E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009571: proplastid stroma | 0.00E+00 |
| 2 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 3.34E-45 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 2.57E-27 |
| 5 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.50E-17 |
| 6 | GO:0009941: chloroplast envelope | 6.26E-14 |
| 7 | GO:0009534: chloroplast thylakoid | 1.87E-13 |
| 8 | GO:0009570: chloroplast stroma | 1.53E-12 |
| 9 | GO:0009579: thylakoid | 3.18E-12 |
| 10 | GO:0009654: photosystem II oxygen evolving complex | 4.93E-05 |
| 11 | GO:0009523: photosystem II | 1.50E-04 |
| 12 | GO:0009344: nitrite reductase complex [NAD(P)H] | 1.93E-04 |
| 13 | GO:0009782: photosystem I antenna complex | 1.93E-04 |
| 14 | GO:0009528: plastid inner membrane | 7.06E-04 |
| 15 | GO:0048046: apoplast | 7.57E-04 |
| 16 | GO:0042651: thylakoid membrane | 8.55E-04 |
| 17 | GO:0009527: plastid outer membrane | 1.34E-03 |
| 18 | GO:0030286: dynein complex | 1.34E-03 |
| 19 | GO:0009517: PSII associated light-harvesting complex II | 1.34E-03 |
| 20 | GO:0009706: chloroplast inner membrane | 1.65E-03 |
| 21 | GO:0019898: extrinsic component of membrane | 1.73E-03 |
| 22 | GO:0010287: plastoglobule | 2.04E-03 |
| 23 | GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o) | 2.10E-03 |
| 24 | GO:0010319: stromule | 2.38E-03 |
| 25 | GO:0009707: chloroplast outer membrane | 3.47E-03 |
| 26 | GO:0009539: photosystem II reaction center | 3.93E-03 |
| 27 | GO:0016324: apical plasma membrane | 5.55E-03 |
| 28 | GO:0016021: integral component of membrane | 5.64E-03 |
| 29 | GO:0019013: viral nucleocapsid | 7.36E-03 |
| 30 | GO:0030095: chloroplast photosystem II | 8.01E-03 |
| 31 | GO:0030076: light-harvesting complex | 8.67E-03 |
| 32 | GO:0005875: microtubule associated complex | 9.35E-03 |
| 33 | GO:0009532: plastid stroma | 1.15E-02 |
| 34 | GO:0009543: chloroplast thylakoid lumen | 1.36E-02 |
| 35 | GO:0005871: kinesin complex | 1.47E-02 |
| 36 | GO:0009504: cell plate | 1.81E-02 |
| 37 | GO:0005694: chromosome | 1.99E-02 |
| 38 | GO:0030529: intracellular ribonucleoprotein complex | 2.47E-02 |
| 39 | GO:0016020: membrane | 2.57E-02 |
| 40 | GO:0005819: spindle | 3.76E-02 |
| 41 | GO:0031977: thylakoid lumen | 3.99E-02 |
| 42 | GO:0005856: cytoskeleton | 4.59E-02 |