co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G43510

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0007141: male meiosis I	0.00E+00
2	GO:0080180: 2-methylguanosine metabolic process	0.00E+00
3	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
4	GO:0051553: flavone biosynthetic process	0.00E+00
5	GO:0060548: negative regulation of cell death	2.35E-05
6	GO:0006499: N-terminal protein myristoylation	2.66E-05
7	GO:0009968: negative regulation of signal transduction	1.75E-04
8	GO:0010266: response to vitamin B1	1.75E-04
9	GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine	1.75E-04
10	GO:0000077: DNA damage checkpoint	1.75E-04
11	GO:0043547: positive regulation of GTPase activity	1.75E-04
12	GO:0006422: aspartyl-tRNA aminoacylation	1.75E-04
13	GO:0043687: post-translational protein modification	1.75E-04
14	GO:0002143: tRNA wobble position uridine thiolation	1.75E-04
15	GO:0042742: defense response to bacterium	2.78E-04
16	GO:0002221: pattern recognition receptor signaling pathway	3.96E-04
17	GO:0015914: phospholipid transport	3.96E-04
18	GO:0040020: regulation of meiotic nuclear division	3.96E-04
19	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	3.96E-04
20	GO:0008535: respiratory chain complex IV assembly	3.96E-04
21	GO:0010150: leaf senescence	4.52E-04
22	GO:0006468: protein phosphorylation	5.01E-04
23	GO:0072661: protein targeting to plasma membrane	6.47E-04
24	GO:0006517: protein deglycosylation	6.47E-04
25	GO:0010498: proteasomal protein catabolic process	6.47E-04
26	GO:1900055: regulation of leaf senescence	6.47E-04
27	GO:1900140: regulation of seedling development	6.47E-04
28	GO:2000377: regulation of reactive oxygen species metabolic process	6.82E-04
29	GO:0007131: reciprocal meiotic recombination	8.98E-04
30	GO:0000187: activation of MAPK activity	9.23E-04
31	GO:0048194: Golgi vesicle budding	9.23E-04
32	GO:0002239: response to oomycetes	9.23E-04
33	GO:0071323: cellular response to chitin	9.23E-04
34	GO:0010227: floral organ abscission	9.77E-04
35	GO:0033320: UDP-D-xylose biosynthetic process	1.22E-03
36	GO:2000038: regulation of stomatal complex development	1.22E-03
37	GO:0080142: regulation of salicylic acid biosynthetic process	1.22E-03
38	GO:0009620: response to fungus	1.24E-03
39	GO:0031365: N-terminal protein amino acid modification	1.56E-03
40	GO:0045116: protein neddylation	1.56E-03
41	GO:0018279: protein N-linked glycosylation via asparagine	1.56E-03
42	GO:0006952: defense response	1.57E-03
43	GO:0000302: response to reactive oxygen species	1.63E-03
44	GO:0030163: protein catabolic process	1.85E-03
45	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	1.91E-03
46	GO:0048232: male gamete generation	1.91E-03
47	GO:0042732: D-xylose metabolic process	1.91E-03
48	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	1.91E-03
49	GO:0047484: regulation of response to osmotic stress	1.91E-03
50	GO:1900425: negative regulation of defense response to bacterium	1.91E-03
51	GO:2000037: regulation of stomatal complex patterning	2.30E-03
52	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.30E-03
53	GO:0000911: cytokinesis by cell plate formation	2.30E-03
54	GO:0009612: response to mechanical stimulus	2.30E-03
55	GO:0006694: steroid biosynthetic process	2.30E-03
56	GO:0009627: systemic acquired resistance	2.61E-03
57	GO:0043090: amino acid import	2.70E-03
58	GO:0070370: cellular heat acclimation	2.70E-03
59	GO:0006400: tRNA modification	2.70E-03
60	GO:0008219: cell death	3.04E-03
61	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.13E-03
62	GO:0009819: drought recovery	3.13E-03
63	GO:0006491: N-glycan processing	3.13E-03
64	GO:1900150: regulation of defense response to fungus	3.13E-03
65	GO:0009813: flavonoid biosynthetic process	3.19E-03
66	GO:0007166: cell surface receptor signaling pathway	3.29E-03
67	GO:0009617: response to bacterium	3.47E-03
68	GO:0006002: fructose 6-phosphate metabolic process	3.58E-03
69	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	3.58E-03
70	GO:0006367: transcription initiation from RNA polymerase II promoter	3.58E-03
71	GO:0010332: response to gamma radiation	4.05E-03
72	GO:0009821: alkaloid biosynthetic process	4.05E-03
73	GO:0043069: negative regulation of programmed cell death	5.05E-03
74	GO:0006995: cellular response to nitrogen starvation	5.05E-03
75	GO:0051026: chiasma assembly	5.05E-03
76	GO:0000103: sulfate assimilation	5.05E-03
77	GO:0030148: sphingolipid biosynthetic process	5.58E-03
78	GO:0019684: photosynthesis, light reaction	5.58E-03
79	GO:0010582: floral meristem determinacy	6.13E-03
80	GO:0080167: response to karrikin	6.34E-03
81	GO:0010200: response to chitin	6.62E-03
82	GO:0010229: inflorescence development	6.70E-03
83	GO:0055046: microgametogenesis	6.70E-03
84	GO:0010102: lateral root morphogenesis	6.70E-03
85	GO:0046777: protein autophosphorylation	6.91E-03
86	GO:0034605: cellular response to heat	7.28E-03
87	GO:0002237: response to molecule of bacterial origin	7.28E-03
88	GO:0070588: calcium ion transmembrane transport	7.89E-03
89	GO:0010053: root epidermal cell differentiation	7.89E-03
90	GO:0009225: nucleotide-sugar metabolic process	7.89E-03
91	GO:0042343: indole glucosinolate metabolic process	7.89E-03
92	GO:0006487: protein N-linked glycosylation	9.15E-03
93	GO:0000027: ribosomal large subunit assembly	9.15E-03
94	GO:0030150: protein import into mitochondrial matrix	9.15E-03
95	GO:0080147: root hair cell development	9.15E-03
96	GO:0016575: histone deacetylation	9.80E-03
97	GO:0006874: cellular calcium ion homeostasis	9.80E-03
98	GO:0032259: methylation	9.86E-03
99	GO:0006508: proteolysis	1.01E-02
100	GO:0009751: response to salicylic acid	1.02E-02
101	GO:0098542: defense response to other organism	1.05E-02
102	GO:0031348: negative regulation of defense response	1.12E-02
103	GO:0009814: defense response, incompatible interaction	1.12E-02
104	GO:0030433: ubiquitin-dependent ERAD pathway	1.12E-02
105	GO:0009561: megagametogenesis	1.26E-02
106	GO:0042127: regulation of cell proliferation	1.26E-02
107	GO:0009306: protein secretion	1.26E-02
108	GO:0042391: regulation of membrane potential	1.41E-02
109	GO:0010197: polar nucleus fusion	1.49E-02
110	GO:0010182: sugar mediated signaling pathway	1.49E-02
111	GO:0008360: regulation of cell shape	1.49E-02
112	GO:0006662: glycerol ether metabolic process	1.49E-02
113	GO:0061025: membrane fusion	1.56E-02
114	GO:0006623: protein targeting to vacuole	1.64E-02
115	GO:0010183: pollen tube guidance	1.64E-02
116	GO:0009749: response to glucose	1.64E-02
117	GO:0002229: defense response to oomycetes	1.72E-02
118	GO:0007264: small GTPase mediated signal transduction	1.81E-02
119	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.84E-02
120	GO:0010468: regulation of gene expression	1.97E-02
121	GO:0006310: DNA recombination	1.98E-02
122	GO:0010252: auxin homeostasis	1.98E-02
123	GO:0015031: protein transport	2.18E-02
124	GO:0009615: response to virus	2.24E-02
125	GO:0009607: response to biotic stimulus	2.33E-02
126	GO:0006906: vesicle fusion	2.42E-02
127	GO:0050832: defense response to fungus	2.74E-02
128	GO:0010119: regulation of stomatal movement	3.00E-02
129	GO:0006865: amino acid transport	3.10E-02
130	GO:0045087: innate immune response	3.20E-02
131	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.27E-02
132	GO:0006099: tricarboxylic acid cycle	3.31E-02
133	GO:0034599: cellular response to oxidative stress	3.31E-02
134	GO:0016192: vesicle-mediated transport	3.33E-02
135	GO:0044550: secondary metabolite biosynthetic process	3.44E-02
136	GO:0006887: exocytosis	3.62E-02
137	GO:0045454: cell redox homeostasis	3.78E-02
138	GO:0051707: response to other organism	3.84E-02
139	GO:0000209: protein polyubiquitination	3.95E-02
140	GO:0008643: carbohydrate transport	4.06E-02
141	GO:0009965: leaf morphogenesis	4.17E-02
142	GO:0031347: regulation of defense response	4.39E-02
143	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.39E-02
144	GO:0006260: DNA replication	4.39E-02
145	GO:0000165: MAPK cascade	4.39E-02
146	GO:0009737: response to abscisic acid	4.61E-02
147	GO:0006281: DNA repair	4.65E-02
148	GO:0009809: lignin biosynthetic process	4.74E-02
149	GO:0009753: response to jasmonic acid	4.98E-02
150	GO:0009414: response to water deprivation	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0016504: peptidase activator activity	0.00E+00
2	GO:0033759: flavone synthase activity	0.00E+00
3	GO:0015370: solute:sodium symporter activity	0.00E+00
4	GO:0061604: molybdopterin-synthase sulfurtransferase activity	0.00E+00
5	GO:0004164: diphthine synthase activity	0.00E+00
6	GO:0070577: lysine-acetylated histone binding	0.00E+00
7	GO:0050220: prostaglandin-E synthase activity	0.00E+00
8	GO:0061605: molybdopterin-synthase adenylyltransferase activity	0.00E+00
9	GO:0004576: oligosaccharyl transferase activity	2.35E-05
10	GO:0004190: aspartic-type endopeptidase activity	2.39E-05
11	GO:0008641: small protein activating enzyme activity	3.81E-05
12	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	3.81E-05
13	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.35E-04
14	GO:0005524: ATP binding	1.48E-04
15	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	1.75E-04
16	GO:0015085: calcium ion transmembrane transporter activity	1.75E-04
17	GO:0004815: aspartate-tRNA ligase activity	1.75E-04
18	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	1.75E-04
19	GO:0019707: protein-cysteine S-acyltransferase activity	1.75E-04
20	GO:0016301: kinase activity	3.31E-04
21	GO:0001054: RNA polymerase I activity	3.36E-04
22	GO:0019781: NEDD8 activating enzyme activity	3.96E-04
23	GO:0045140: inositol phosphoceramide synthase activity	3.96E-04
24	GO:0052692: raffinose alpha-galactosidase activity	6.47E-04
25	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	6.47E-04
26	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	6.47E-04
27	GO:0004557: alpha-galactosidase activity	6.47E-04
28	GO:0033612: receptor serine/threonine kinase binding	8.23E-04
29	GO:0004792: thiosulfate sulfurtransferase activity	9.23E-04
30	GO:0015204: urea transmembrane transporter activity	1.22E-03
31	GO:0070628: proteasome binding	1.22E-03
32	GO:0004930: G-protein coupled receptor activity	1.22E-03
33	GO:0045431: flavonol synthase activity	1.56E-03
34	GO:0048040: UDP-glucuronate decarboxylase activity	1.91E-03
35	GO:0070403: NAD+ binding	2.30E-03
36	GO:0004012: phospholipid-translocating ATPase activity	2.30E-03
37	GO:0004656: procollagen-proline 4-dioxygenase activity	2.30E-03
38	GO:0005516: calmodulin binding	2.49E-03
39	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.54E-03
40	GO:0008235: metalloexopeptidase activity	2.70E-03
41	GO:0003872: 6-phosphofructokinase activity	2.70E-03
42	GO:0052747: sinapyl alcohol dehydrogenase activity	3.13E-03
43	GO:0004708: MAP kinase kinase activity	3.13E-03
44	GO:0004674: protein serine/threonine kinase activity	3.33E-03
45	GO:0003843: 1,3-beta-D-glucan synthase activity	3.58E-03
46	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	3.58E-03
47	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.84E-03
48	GO:0016844: strictosidine synthase activity	4.54E-03
49	GO:0008168: methyltransferase activity	4.60E-03
50	GO:0005484: SNAP receptor activity	4.95E-03
51	GO:0000166: nucleotide binding	5.23E-03
52	GO:0043531: ADP binding	5.43E-03
53	GO:0015293: symporter activity	5.56E-03
54	GO:0004177: aminopeptidase activity	5.58E-03
55	GO:0045551: cinnamyl-alcohol dehydrogenase activity	6.13E-03
56	GO:0001056: RNA polymerase III activity	6.13E-03
57	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	6.66E-03
58	GO:0005388: calcium-transporting ATPase activity	6.70E-03
59	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	6.70E-03
60	GO:0030552: cAMP binding	7.89E-03
61	GO:0030553: cGMP binding	7.89E-03
62	GO:0008061: chitin binding	7.89E-03
63	GO:0003712: transcription cofactor activity	7.89E-03
64	GO:0005217: intracellular ligand-gated ion channel activity	7.89E-03
65	GO:0004970: ionotropic glutamate receptor activity	7.89E-03
66	GO:0031418: L-ascorbic acid binding	9.15E-03
67	GO:0003954: NADH dehydrogenase activity	9.15E-03
68	GO:0004407: histone deacetylase activity	9.15E-03
69	GO:0015035: protein disulfide oxidoreductase activity	9.78E-03
70	GO:0005216: ion channel activity	9.80E-03
71	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.05E-02
72	GO:0004707: MAP kinase activity	1.05E-02
73	GO:0008514: organic anion transmembrane transporter activity	1.26E-02
74	GO:0047134: protein-disulfide reductase activity	1.33E-02
75	GO:0005249: voltage-gated potassium channel activity	1.41E-02
76	GO:0030551: cyclic nucleotide binding	1.41E-02
77	GO:0004791: thioredoxin-disulfide reductase activity	1.56E-02
78	GO:0005515: protein binding	1.69E-02
79	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.89E-02
80	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.06E-02
81	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.42E-02
82	GO:0004683: calmodulin-dependent protein kinase activity	2.52E-02
83	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.52E-02
84	GO:0004721: phosphoprotein phosphatase activity	2.52E-02
85	GO:0004004: ATP-dependent RNA helicase activity	2.52E-02
86	GO:0043565: sequence-specific DNA binding	2.66E-02
87	GO:0004672: protein kinase activity	2.69E-02
88	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.71E-02
89	GO:0005096: GTPase activator activity	2.80E-02
90	GO:0003697: single-stranded DNA binding	3.20E-02
91	GO:0061630: ubiquitin protein ligase activity	3.33E-02
92	GO:0000149: SNARE binding	3.41E-02
93	GO:0042803: protein homodimerization activity	3.96E-02
94	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	4.08E-02
95	GO:0046872: metal ion binding	4.10E-02

Rank	GO Term	Adjusted P value
1	GO:0005674: transcription factor TFIIF complex	0.00E+00
2	GO:0005886: plasma membrane	1.07E-06
3	GO:0016021: integral component of membrane	3.72E-06
4	GO:0005783: endoplasmic reticulum	2.78E-05
5	GO:0008250: oligosaccharyltransferase complex	3.81E-05
6	GO:0009504: cell plate	1.24E-04
7	GO:0045252: oxoglutarate dehydrogenase complex	1.75E-04
8	GO:0000138: Golgi trans cisterna	1.75E-04
9	GO:0005736: DNA-directed RNA polymerase I complex	2.06E-04
10	GO:0031304: intrinsic component of mitochondrial inner membrane	3.96E-04
11	GO:0005802: trans-Golgi network	7.02E-04
12	GO:0005945: 6-phosphofructokinase complex	1.56E-03
13	GO:0016020: membrane	2.01E-03
14	GO:0005789: endoplasmic reticulum membrane	2.57E-03
15	GO:0005887: integral component of plasma membrane	3.48E-03
16	GO:0000148: 1,3-beta-D-glucan synthase complex	3.58E-03
17	GO:0031901: early endosome membrane	4.05E-03
18	GO:0005666: DNA-directed RNA polymerase III complex	4.54E-03
19	GO:0017119: Golgi transport complex	5.05E-03
20	GO:0005769: early endosome	8.51E-03
21	GO:0005839: proteasome core complex	1.05E-02
22	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.26E-02
23	GO:0005768: endosome	1.30E-02
24	GO:0000790: nuclear chromatin	1.33E-02
25	GO:0005794: Golgi apparatus	1.33E-02
26	GO:0019898: extrinsic component of membrane	1.64E-02
27	GO:0009505: plant-type cell wall	2.13E-02
28	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	2.80E-02
29	GO:0009506: plasmodesma	3.20E-02
30	GO:0005730: nucleolus	3.31E-02
31	GO:0031201: SNARE complex	3.62E-02
32	GO:0031902: late endosome membrane	3.62E-02
33	GO:0090406: pollen tube	3.84E-02
34	GO:0005829: cytosol	4.20E-02
35	GO:0005743: mitochondrial inner membrane	4.33E-02