Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G27390

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010499: proteasomal ubiquitin-independent protein catabolic process0.00E+00
2GO:0006182: cGMP biosynthetic process0.00E+00
3GO:0006592: ornithine biosynthetic process0.00E+00
4GO:0006987: activation of signaling protein activity involved in unfolded protein response0.00E+00
5GO:0010120: camalexin biosynthetic process3.22E-05
6GO:0008202: steroid metabolic process4.94E-05
7GO:1901183: positive regulation of camalexin biosynthetic process5.94E-05
8GO:0042759: long-chain fatty acid biosynthetic process5.94E-05
9GO:0099132: ATP hydrolysis coupled cation transmembrane transport5.94E-05
10GO:0010726: positive regulation of hydrogen peroxide metabolic process5.94E-05
11GO:0043066: negative regulation of apoptotic process1.44E-04
12GO:0019441: tryptophan catabolic process to kynurenine1.44E-04
13GO:0006468: protein phosphorylation2.53E-04
14GO:0046513: ceramide biosynthetic process3.57E-04
15GO:0010116: positive regulation of abscisic acid biosynthetic process3.57E-04
16GO:0070301: cellular response to hydrogen peroxide3.57E-04
17GO:0072334: UDP-galactose transmembrane transport3.57E-04
18GO:0009399: nitrogen fixation3.57E-04
19GO:0006952: defense response4.56E-04
20GO:0006542: glutamine biosynthetic process4.78E-04
21GO:0010252: auxin homeostasis4.83E-04
22GO:1900425: negative regulation of defense response to bacterium7.40E-04
23GO:0002238: response to molecule of fungal origin7.40E-04
24GO:0006014: D-ribose metabolic process7.40E-04
25GO:0006561: proline biosynthetic process7.40E-04
26GO:0010942: positive regulation of cell death7.40E-04
27GO:0009817: defense response to fungus, incompatible interaction7.40E-04
28GO:0000122: negative regulation of transcription from RNA polymerase II promoter1.03E-03
29GO:1902074: response to salt1.03E-03
30GO:1900056: negative regulation of leaf senescence1.03E-03
31GO:1900150: regulation of defense response to fungus1.18E-03
32GO:0006526: arginine biosynthetic process1.35E-03
33GO:0030968: endoplasmic reticulum unfolded protein response1.35E-03
34GO:0009808: lignin metabolic process1.35E-03
35GO:0007338: single fertilization1.52E-03
36GO:0032259: methylation1.53E-03
37GO:0009751: response to salicylic acid1.59E-03
38GO:0043069: negative regulation of programmed cell death1.88E-03
39GO:0009733: response to auxin1.93E-03
40GO:0071365: cellular response to auxin stimulus2.27E-03
41GO:0012501: programmed cell death2.27E-03
42GO:0009718: anthocyanin-containing compound biosynthetic process2.47E-03
43GO:0070588: calcium ion transmembrane transport2.89E-03
44GO:0046854: phosphatidylinositol phosphorylation2.89E-03
45GO:0010167: response to nitrate2.89E-03
46GO:0034976: response to endoplasmic reticulum stress3.11E-03
47GO:0005992: trehalose biosynthetic process3.34E-03
48GO:0009695: jasmonic acid biosynthetic process3.57E-03
49GO:0016575: histone deacetylation3.57E-03
50GO:0010150: leaf senescence3.80E-03
51GO:0031408: oxylipin biosynthetic process3.81E-03
52GO:0016998: cell wall macromolecule catabolic process3.81E-03
53GO:0010227: floral organ abscission4.30E-03
54GO:0010584: pollen exine formation4.55E-03
55GO:0042147: retrograde transport, endosome to Golgi4.81E-03
56GO:0048544: recognition of pollen5.61E-03
57GO:0009749: response to glucose5.89E-03
58GO:0019252: starch biosynthetic process5.89E-03
59GO:0002229: defense response to oomycetes6.17E-03
60GO:0010583: response to cyclopentenone6.46E-03
61GO:0009567: double fertilization forming a zygote and endosperm7.05E-03
62GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway7.51E-03
63GO:0046777: protein autophosphorylation7.77E-03
64GO:0042742: defense response to bacterium8.15E-03
65GO:0009607: response to biotic stimulus8.28E-03
66GO:0009816: defense response to bacterium, incompatible interaction8.28E-03
67GO:0042128: nitrate assimilation8.60E-03
68GO:0006950: response to stress8.92E-03
69GO:0006869: lipid transport9.54E-03
70GO:0008219: cell death9.59E-03
71GO:0010311: lateral root formation9.93E-03
72GO:0006499: N-terminal protein myristoylation1.03E-02
73GO:0009407: toxin catabolic process1.03E-02
74GO:0048364: root development1.12E-02
75GO:0016051: carbohydrate biosynthetic process1.13E-02
76GO:0009636: response to toxic substance1.47E-02
77GO:0009846: pollen germination1.59E-02
78GO:0042538: hyperosmotic salinity response1.59E-02
79GO:0009809: lignin biosynthetic process1.67E-02
80GO:0006096: glycolytic process1.88E-02
81GO:0009620: response to fungus2.01E-02
82GO:0009742: brassinosteroid mediated signaling pathway2.24E-02
83GO:0006633: fatty acid biosynthetic process2.97E-02
84GO:0006508: proteolysis3.35E-02
85GO:0007166: cell surface receptor signaling pathway3.49E-02
86GO:0008380: RNA splicing3.60E-02
87GO:0009617: response to bacterium3.60E-02
88GO:0009826: unidimensional cell growth4.21E-02
89GO:0006970: response to osmotic stress4.56E-02
RankGO TermAdjusted P value
1GO:0008777: acetylornithine deacetylase activity0.00E+00
2GO:0016504: peptidase activator activity0.00E+00
3GO:0070577: lysine-acetylated histone binding0.00E+00
4GO:0016301: kinase activity8.89E-07
5GO:0010279: indole-3-acetic acid amido synthetase activity3.69E-06
6GO:0004674: protein serine/threonine kinase activity1.05E-05
7GO:0008142: oxysterol binding3.22E-05
8GO:0005524: ATP binding3.80E-05
9GO:0004321: fatty-acyl-CoA synthase activity5.94E-05
10GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity5.94E-05
11GO:0004061: arylformamidase activity1.44E-04
12GO:0050291: sphingosine N-acyltransferase activity1.44E-04
13GO:0032934: sterol binding1.44E-04
14GO:0003955: NAD(P)H dehydrogenase (quinone) activity2.46E-04
15GO:0004383: guanylate cyclase activity2.46E-04
16GO:0016595: glutamate binding2.46E-04
17GO:0000285: 1-phosphatidylinositol-3-phosphate 5-kinase activity3.57E-04
18GO:0070628: proteasome binding4.78E-04
19GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor4.78E-04
20GO:0001106: RNA polymerase II transcription corepressor activity4.78E-04
21GO:0004356: glutamate-ammonia ligase activity6.05E-04
22GO:0005459: UDP-galactose transmembrane transporter activity6.05E-04
23GO:0008757: S-adenosylmethionine-dependent methyltransferase activity7.05E-04
24GO:0004747: ribokinase activity8.82E-04
25GO:0008865: fructokinase activity1.18E-03
26GO:0004630: phospholipase D activity1.35E-03
27GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity1.35E-03
28GO:0016207: 4-coumarate-CoA ligase activity1.52E-03
29GO:0071949: FAD binding1.52E-03
30GO:0030955: potassium ion binding1.69E-03
31GO:0004743: pyruvate kinase activity1.69E-03
32GO:0008171: O-methyltransferase activity1.88E-03
33GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity1.88E-03
34GO:0004521: endoribonuclease activity2.27E-03
35GO:0005388: calcium-transporting ATPase activity2.47E-03
36GO:0004407: histone deacetylase activity3.34E-03
37GO:0003756: protein disulfide isomerase activity4.55E-03
38GO:0016853: isomerase activity5.61E-03
39GO:0010181: FMN binding5.61E-03
40GO:0008168: methyltransferase activity5.65E-03
41GO:0008237: metallopeptidase activity7.35E-03
42GO:0051213: dioxygenase activity7.97E-03
43GO:0030247: polysaccharide binding8.92E-03
44GO:0004222: metalloendopeptidase activity1.03E-02
45GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.06E-02
46GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.13E-02
47GO:0004364: glutathione transferase activity1.32E-02
48GO:0035091: phosphatidylinositol binding1.43E-02
49GO:0016874: ligase activity2.06E-02
50GO:0015035: protein disulfide oxidoreductase activity2.19E-02
51GO:0030246: carbohydrate binding2.57E-02
52GO:0046872: metal ion binding2.66E-02
53GO:0005516: calmodulin binding2.88E-02
54GO:0000287: magnesium ion binding4.27E-02
55GO:0043531: ADP binding4.62E-02
56GO:0050660: flavin adenine dinucleotide binding4.80E-02
RankGO TermAdjusted P value
1GO:0005829: cytosol9.36E-05
2GO:0005886: plasma membrane2.29E-04
3GO:0042406: extrinsic component of endoplasmic reticulum membrane2.46E-04
4GO:0000118: histone deacetylase complex8.82E-04
5GO:0030173: integral component of Golgi membrane8.82E-04
6GO:0005783: endoplasmic reticulum2.71E-03
7GO:0016021: integral component of membrane2.79E-03
8GO:0030176: integral component of endoplasmic reticulum membrane2.89E-03
9GO:0005839: proteasome core complex3.81E-03
10GO:0031410: cytoplasmic vesicle4.05E-03
11GO:0000785: chromatin6.46E-03
12GO:0005788: endoplasmic reticulum lumen8.28E-03
13GO:0031966: mitochondrial membrane1.59E-02
14GO:0010008: endosome membrane1.93E-02
15GO:0005777: peroxisome2.20E-02
16GO:0005618: cell wall4.59E-02
17GO:0080008: Cul4-RING E3 ubiquitin ligase complex4.62E-02
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Gene type



Gene DE type