Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G27360

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0016048: detection of temperature stimulus0.00E+00
2GO:0031508: pericentric heterochromatin assembly0.00E+00
3GO:0044030: regulation of DNA methylation3.56E-06
4GO:0000272: polysaccharide catabolic process8.48E-06
5GO:0080164: regulation of nitric oxide metabolic process1.48E-05
6GO:0048438: floral whorl development1.48E-05
7GO:0019722: calcium-mediated signaling3.67E-05
8GO:0010220: positive regulation of vernalization response3.88E-05
9GO:0051592: response to calcium ion3.88E-05
10GO:0010424: DNA methylation on cytosine within a CG sequence3.88E-05
11GO:0090309: positive regulation of methylation-dependent chromatin silencing3.88E-05
12GO:0006342: chromatin silencing4.85E-05
13GO:0032776: DNA methylation on cytosine6.95E-05
14GO:0006556: S-adenosylmethionine biosynthetic process6.95E-05
15GO:0007267: cell-cell signaling8.26E-05
16GO:0009117: nucleotide metabolic process2.34E-04
17GO:0006555: methionine metabolic process2.34E-04
18GO:0000060: protein import into nucleus, translocation2.34E-04
19GO:0009612: response to mechanical stimulus2.82E-04
20GO:0010076: maintenance of floral meristem identity2.82E-04
21GO:0010077: maintenance of inflorescence meristem identity2.82E-04
22GO:0009909: regulation of flower development3.21E-04
23GO:0051510: regulation of unidimensional cell growth3.32E-04
24GO:0010038: response to metal ion3.32E-04
25GO:0048574: long-day photoperiodism, flowering4.37E-04
26GO:0006325: chromatin organization6.08E-04
27GO:0010216: maintenance of DNA methylation6.67E-04
28GO:0009698: phenylpropanoid metabolic process6.67E-04
29GO:0010582: floral meristem determinacy7.29E-04
30GO:0018107: peptidyl-threonine phosphorylation7.91E-04
31GO:0010468: regulation of gene expression8.26E-04
32GO:0006334: nucleosome assembly1.19E-03
33GO:0006730: one-carbon metabolic process1.26E-03
34GO:0009411: response to UV1.34E-03
35GO:0010584: pollen exine formation1.41E-03
36GO:0009741: response to brassinosteroid1.65E-03
37GO:0009646: response to absence of light1.73E-03
38GO:0009791: post-embryonic development1.81E-03
39GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.89E-03
40GO:0008152: metabolic process2.07E-03
41GO:0009788: negative regulation of abscisic acid-activated signaling pathway2.52E-03
42GO:0045087: innate immune response3.40E-03
43GO:0009637: response to blue light3.40E-03
44GO:0042542: response to hydrogen peroxide3.93E-03
45GO:0000165: MAPK cascade4.60E-03
46GO:0009809: lignin biosynthetic process4.95E-03
47GO:0016569: covalent chromatin modification6.05E-03
48GO:0018105: peptidyl-serine phosphorylation6.44E-03
49GO:0009742: brassinosteroid mediated signaling pathway6.57E-03
50GO:0040008: regulation of growth8.93E-03
51GO:0009409: response to cold9.02E-03
52GO:0009739: response to gibberellin9.99E-03
53GO:0045944: positive regulation of transcription from RNA polymerase II promoter1.19E-02
54GO:0009826: unidimensional cell growth1.22E-02
55GO:0006970: response to osmotic stress1.32E-02
56GO:0046777: protein autophosphorylation1.53E-02
57GO:0045454: cell redox homeostasis1.66E-02
58GO:0045892: negative regulation of transcription, DNA-templated1.68E-02
59GO:0009408: response to heat1.93E-02
60GO:0009908: flower development2.70E-02
61GO:0009738: abscisic acid-activated signaling pathway2.83E-02
62GO:0035556: intracellular signal transduction3.01E-02
63GO:0051301: cell division3.08E-02
64GO:0045893: positive regulation of transcription, DNA-templated3.20E-02
65GO:0009414: response to water deprivation4.71E-02
66GO:0071555: cell wall organization4.79E-02
67GO:0042742: defense response to bacterium4.79E-02
RankGO TermAdjusted P value
1GO:0046982: protein heterodimerization activity4.90E-10
2GO:0016161: beta-amylase activity1.43E-06
3GO:0003677: DNA binding2.00E-06
4GO:0010429: methyl-CpNpN binding6.95E-05
5GO:0004478: methionine adenosyltransferase activity6.95E-05
6GO:0010428: methyl-CpNpG binding6.95E-05
7GO:0035529: NADH pyrophosphatase activity1.05E-04
8GO:0046527: glucosyltransferase activity1.45E-04
9GO:0010385: double-stranded methylated DNA binding1.45E-04
10GO:0042393: histone binding1.88E-04
11GO:0102229: amylopectin maltohydrolase activity2.34E-04
12GO:0016207: 4-coumarate-CoA ligase activity4.93E-04
13GO:0008327: methyl-CpG binding6.67E-04
14GO:0004871: signal transducer activity1.61E-03
15GO:0016759: cellulose synthase activity2.15E-03
16GO:0016874: ligase activity6.05E-03
17GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding8.07E-03
18GO:0008017: microtubule binding9.53E-03
19GO:0004672: protein kinase activity9.79E-03
20GO:0003682: chromatin binding1.31E-02
21GO:0061630: ubiquitin protein ligase activity1.51E-02
22GO:0005515: protein binding1.68E-02
23GO:0042803: protein homodimerization activity1.72E-02
24GO:0004674: protein serine/threonine kinase activity3.30E-02
25GO:0005509: calcium ion binding4.53E-02
RankGO TermAdjusted P value
1GO:0000788: nuclear nucleosome0.00E+00
2GO:0000786: nucleosome8.97E-13
3GO:0000790: nuclear chromatin4.04E-05
4GO:0005730: nucleolus2.32E-04
5GO:0010369: chromocenter2.82E-04
6GO:0005720: nuclear heterochromatin4.93E-04
7GO:0015629: actin cytoskeleton1.34E-03
8GO:0009506: plasmodesma5.35E-03
9GO:0005623: cell7.51E-03
10GO:0048046: apoplast2.44E-02
11GO:0009579: thylakoid3.29E-02
12GO:0031225: anchored component of membrane3.98E-02
13GO:0005802: trans-Golgi network4.06E-02
14GO:0005622: intracellular4.37E-02
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Gene type



Gene DE type