co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G26430

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	0.00E+00
2	GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	0.00E+00
3	GO:0080180: 2-methylguanosine metabolic process	0.00E+00
4	GO:0043419: urea catabolic process	0.00E+00
5	GO:0072660: maintenance of protein location in plasma membrane	0.00E+00
6	GO:0060548: negative regulation of cell death	2.20E-05
7	GO:0018279: protein N-linked glycosylation via asparagine	3.58E-05
8	GO:0043547: positive regulation of GTPase activity	1.69E-04
9	GO:0051245: negative regulation of cellular defense response	1.69E-04
10	GO:0006422: aspartyl-tRNA aminoacylation	1.69E-04
11	GO:1990022: RNA polymerase III complex localization to nucleus	1.69E-04
12	GO:0043687: post-translational protein modification	1.69E-04
13	GO:0055081: anion homeostasis	1.69E-04
14	GO:0046244: salicylic acid catabolic process	1.69E-04
15	GO:0044376: RNA polymerase II complex import to nucleus	1.69E-04
16	GO:0009968: negative regulation of signal transduction	1.69E-04
17	GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine	1.69E-04
18	GO:0034975: protein folding in endoplasmic reticulum	1.69E-04
19	GO:0016192: vesicle-mediated transport	2.12E-04
20	GO:0043069: negative regulation of programmed cell death	2.75E-04
21	GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	3.83E-04
22	GO:0031349: positive regulation of defense response	3.83E-04
23	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	3.83E-04
24	GO:0051252: regulation of RNA metabolic process	3.83E-04
25	GO:0002221: pattern recognition receptor signaling pathway	3.83E-04
26	GO:0015709: thiosulfate transport	3.83E-04
27	GO:0015914: phospholipid transport	3.83E-04
28	GO:2000072: regulation of defense response to fungus, incompatible interaction	3.83E-04
29	GO:0071422: succinate transmembrane transport	3.83E-04
30	GO:0006468: protein phosphorylation	4.23E-04
31	GO:0070588: calcium ion transmembrane transport	5.27E-04
32	GO:0002230: positive regulation of defense response to virus by host	6.25E-04
33	GO:1900140: regulation of seedling development	6.25E-04
34	GO:0045793: positive regulation of cell size	6.25E-04
35	GO:0072661: protein targeting to plasma membrane	6.25E-04
36	GO:0015992: proton transport	7.83E-04
37	GO:0031348: negative regulation of defense response	8.55E-04
38	GO:0015729: oxaloacetate transport	8.93E-04
39	GO:0002239: response to oomycetes	8.93E-04
40	GO:0033014: tetrapyrrole biosynthetic process	8.93E-04
41	GO:0010148: transpiration	8.93E-04
42	GO:0006612: protein targeting to membrane	8.93E-04
43	GO:1902290: positive regulation of defense response to oomycetes	8.93E-04
44	GO:0006882: cellular zinc ion homeostasis	8.93E-04
45	GO:0032877: positive regulation of DNA endoreduplication	8.93E-04
46	GO:0000187: activation of MAPK activity	8.93E-04
47	GO:0042742: defense response to bacterium	1.00E-03
48	GO:0009620: response to fungus	1.16E-03
49	GO:0051781: positive regulation of cell division	1.18E-03
50	GO:0010363: regulation of plant-type hypersensitive response	1.18E-03
51	GO:0000460: maturation of 5.8S rRNA	1.18E-03
52	GO:2000038: regulation of stomatal complex development	1.18E-03
53	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	1.18E-03
54	GO:0080142: regulation of salicylic acid biosynthetic process	1.18E-03
55	GO:0061025: membrane fusion	1.35E-03
56	GO:0071423: malate transmembrane transport	1.50E-03
57	GO:0006886: intracellular protein transport	1.54E-03
58	GO:0000470: maturation of LSU-rRNA	1.85E-03
59	GO:0047484: regulation of response to osmotic stress	1.85E-03
60	GO:0035435: phosphate ion transmembrane transport	1.85E-03
61	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.22E-03
62	GO:0000911: cytokinesis by cell plate formation	2.22E-03
63	GO:0009612: response to mechanical stimulus	2.22E-03
64	GO:0006694: steroid biosynthetic process	2.22E-03
65	GO:2000037: regulation of stomatal complex patterning	2.22E-03
66	GO:0043090: amino acid import	2.61E-03
67	GO:0071446: cellular response to salicylic acid stimulus	2.61E-03
68	GO:0008272: sulfate transport	2.61E-03
69	GO:1900057: positive regulation of leaf senescence	2.61E-03
70	GO:0006400: tRNA modification	2.61E-03
71	GO:0050832: defense response to fungus	2.78E-03
72	GO:0009787: regulation of abscisic acid-activated signaling pathway	3.02E-03
73	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.02E-03
74	GO:0006102: isocitrate metabolic process	3.02E-03
75	GO:0006499: N-terminal protein myristoylation	3.18E-03
76	GO:0010119: regulation of stomatal movement	3.33E-03
77	GO:0009699: phenylpropanoid biosynthetic process	3.46E-03
78	GO:0006002: fructose 6-phosphate metabolic process	3.46E-03
79	GO:0006367: transcription initiation from RNA polymerase II promoter	3.46E-03
80	GO:2000031: regulation of salicylic acid mediated signaling pathway	3.46E-03
81	GO:0009867: jasmonic acid mediated signaling pathway	3.65E-03
82	GO:0006099: tricarboxylic acid cycle	3.81E-03
83	GO:0006952: defense response	3.88E-03
84	GO:0006783: heme biosynthetic process	3.91E-03
85	GO:0071577: zinc II ion transmembrane transport	4.38E-03
86	GO:1900426: positive regulation of defense response to bacterium	4.38E-03
87	GO:0000103: sulfate assimilation	4.87E-03
88	GO:0030148: sphingolipid biosynthetic process	5.38E-03
89	GO:0031347: regulation of defense response	5.68E-03
90	GO:0015031: protein transport	5.81E-03
91	GO:0010105: negative regulation of ethylene-activated signaling pathway	5.91E-03
92	GO:0006807: nitrogen compound metabolic process	6.46E-03
93	GO:0010229: inflorescence development	6.46E-03
94	GO:0044550: secondary metabolite biosynthetic process	6.60E-03
95	GO:0002237: response to molecule of bacterial origin	7.02E-03
96	GO:0042343: indole glucosinolate metabolic process	7.60E-03
97	GO:0009626: plant-type hypersensitive response	7.97E-03
98	GO:0034976: response to endoplasmic reticulum stress	8.20E-03
99	GO:0000027: ribosomal large subunit assembly	8.81E-03
100	GO:0009863: salicylic acid mediated signaling pathway	8.81E-03
101	GO:0010187: negative regulation of seed germination	8.81E-03
102	GO:0006874: cellular calcium ion homeostasis	9.44E-03
103	GO:0009742: brassinosteroid mediated signaling pathway	9.55E-03
104	GO:0048278: vesicle docking	1.01E-02
105	GO:0098542: defense response to other organism	1.01E-02
106	GO:0055114: oxidation-reduction process	1.07E-02
107	GO:0009814: defense response, incompatible interaction	1.08E-02
108	GO:0030433: ubiquitin-dependent ERAD pathway	1.08E-02
109	GO:0019748: secondary metabolic process	1.08E-02
110	GO:0010227: floral organ abscission	1.14E-02
111	GO:0042127: regulation of cell proliferation	1.21E-02
112	GO:0009306: protein secretion	1.21E-02
113	GO:0008033: tRNA processing	1.36E-02
114	GO:0007165: signal transduction	1.37E-02
115	GO:0009737: response to abscisic acid	1.42E-02
116	GO:0010305: leaf vascular tissue pattern formation	1.43E-02
117	GO:0006662: glycerol ether metabolic process	1.43E-02
118	GO:0010197: polar nucleus fusion	1.43E-02
119	GO:0010182: sugar mediated signaling pathway	1.43E-02
120	GO:0009734: auxin-activated signaling pathway	1.50E-02
121	GO:0010150: leaf senescence	1.56E-02
122	GO:0006623: protein targeting to vacuole	1.58E-02
123	GO:0009749: response to glucose	1.58E-02
124	GO:0002229: defense response to oomycetes	1.66E-02
125	GO:0000302: response to reactive oxygen species	1.66E-02
126	GO:0006470: protein dephosphorylation	1.79E-02
127	GO:0007166: cell surface receptor signaling pathway	1.79E-02
128	GO:0030163: protein catabolic process	1.82E-02
129	GO:0009617: response to bacterium	1.86E-02
130	GO:0006464: cellular protein modification process	1.90E-02
131	GO:0000910: cytokinesis	2.07E-02
132	GO:0035556: intracellular signal transduction	2.16E-02
133	GO:0009826: unidimensional cell growth	2.33E-02
134	GO:0006906: vesicle fusion	2.33E-02
135	GO:0015995: chlorophyll biosynthetic process	2.42E-02
136	GO:0008219: cell death	2.61E-02
137	GO:0007568: aging	2.89E-02
138	GO:0006865: amino acid transport	2.99E-02
139	GO:0080167: response to karrikin	3.00E-02
140	GO:0045087: innate immune response	3.08E-02
141	GO:0010200: response to chitin	3.10E-02
142	GO:0034599: cellular response to oxidative stress	3.18E-02
143	GO:0046777: protein autophosphorylation	3.21E-02
144	GO:0006839: mitochondrial transport	3.38E-02
145	GO:0030001: metal ion transport	3.38E-02
146	GO:0006887: exocytosis	3.49E-02
147	GO:0045454: cell redox homeostasis	3.59E-02
148	GO:0051707: response to other organism	3.69E-02
149	GO:0008643: carbohydrate transport	3.91E-02
150	GO:0000165: MAPK cascade	4.23E-02
151	GO:0032259: methylation	4.23E-02
152	GO:0009664: plant-type cell wall organization	4.34E-02
153	GO:0009751: response to salicylic acid	4.35E-02
154	GO:0009809: lignin biosynthetic process	4.57E-02
155	GO:0008152: metabolic process	4.86E-02
156	GO:0009909: regulation of flower development	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
2	GO:0010857: calcium-dependent protein kinase activity	0.00E+00
3	GO:0004164: diphthine synthase activity	0.00E+00
4	GO:0009039: urease activity	0.00E+00
5	GO:0016603: glutaminyl-peptide cyclotransferase activity	0.00E+00
6	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	3.58E-05
7	GO:0016301: kinase activity	8.91E-05
8	GO:0008320: protein transmembrane transporter activity	9.92E-05
9	GO:0015085: calcium ion transmembrane transporter activity	1.69E-04
10	GO:0004815: aspartate-tRNA ligase activity	1.69E-04
11	GO:0004325: ferrochelatase activity	1.69E-04
12	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	1.69E-04
13	GO:0004674: protein serine/threonine kinase activity	3.29E-04
14	GO:0038199: ethylene receptor activity	3.83E-04
15	GO:0008428: ribonuclease inhibitor activity	3.83E-04
16	GO:0045140: inositol phosphoceramide synthase activity	3.83E-04
17	GO:0015117: thiosulfate transmembrane transporter activity	3.83E-04
18	GO:1901677: phosphate transmembrane transporter activity	3.83E-04
19	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	3.83E-04
20	GO:0043021: ribonucleoprotein complex binding	3.83E-04
21	GO:0005388: calcium-transporting ATPase activity	4.18E-04
22	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.69E-04
23	GO:0005524: ATP binding	5.53E-04
24	GO:0016151: nickel cation binding	6.25E-04
25	GO:0005310: dicarboxylic acid transmembrane transporter activity	6.25E-04
26	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	6.25E-04
27	GO:0015141: succinate transmembrane transporter activity	6.25E-04
28	GO:0033612: receptor serine/threonine kinase binding	7.83E-04
29	GO:0015131: oxaloacetate transmembrane transporter activity	8.93E-04
30	GO:0009678: hydrogen-translocating pyrophosphatase activity	8.93E-04
31	GO:0004449: isocitrate dehydrogenase (NAD+) activity	8.93E-04
32	GO:0051740: ethylene binding	8.93E-04
33	GO:0017077: oxidative phosphorylation uncoupler activity	8.93E-04
34	GO:0003756: protein disulfide isomerase activity	1.01E-03
35	GO:0000166: nucleotide binding	1.11E-03
36	GO:0043495: protein anchor	1.18E-03
37	GO:0004930: G-protein coupled receptor activity	1.18E-03
38	GO:0004576: oligosaccharyl transferase activity	1.18E-03
39	GO:0010011: auxin binding	1.18E-03
40	GO:0004872: receptor activity	1.44E-03
41	GO:0008948: oxaloacetate decarboxylase activity	1.50E-03
42	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.75E-03
43	GO:0031593: polyubiquitin binding	1.85E-03
44	GO:0004029: aldehyde dehydrogenase (NAD) activity	1.85E-03
45	GO:0004656: procollagen-proline 4-dioxygenase activity	2.22E-03
46	GO:0004427: inorganic diphosphatase activity	2.61E-03
47	GO:0003872: 6-phosphofructokinase activity	2.61E-03
48	GO:0015140: malate transmembrane transporter activity	2.61E-03
49	GO:0052747: sinapyl alcohol dehydrogenase activity	3.02E-03
50	GO:0004708: MAP kinase kinase activity	3.02E-03
51	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.02E-03
52	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.65E-03
53	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	4.38E-03
54	GO:0005484: SNAP receptor activity	4.70E-03
55	GO:0004713: protein tyrosine kinase activity	4.87E-03
56	GO:0004673: protein histidine kinase activity	4.87E-03
57	GO:0015116: sulfate transmembrane transporter activity	5.91E-03
58	GO:0045551: cinnamyl-alcohol dehydrogenase activity	5.91E-03
59	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	6.46E-03
60	GO:0015095: magnesium ion transmembrane transporter activity	6.46E-03
61	GO:0000155: phosphorelay sensor kinase activity	6.46E-03
62	GO:0004672: protein kinase activity	7.47E-03
63	GO:0003712: transcription cofactor activity	7.60E-03
64	GO:0005217: intracellular ligand-gated ion channel activity	7.60E-03
65	GO:0004970: ionotropic glutamate receptor activity	7.60E-03
66	GO:0004190: aspartic-type endopeptidase activity	7.60E-03
67	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	8.22E-03
68	GO:0046872: metal ion binding	8.63E-03
69	GO:0005385: zinc ion transmembrane transporter activity	8.81E-03
70	GO:0043130: ubiquitin binding	8.81E-03
71	GO:0031418: L-ascorbic acid binding	8.81E-03
72	GO:0005516: calmodulin binding	8.96E-03
73	GO:0015035: protein disulfide oxidoreductase activity	9.27E-03
74	GO:0016746: transferase activity, transferring acyl groups	9.27E-03
75	GO:0004707: MAP kinase activity	1.01E-02
76	GO:0008514: organic anion transmembrane transporter activity	1.21E-02
77	GO:0047134: protein-disulfide reductase activity	1.28E-02
78	GO:0005506: iron ion binding	1.37E-02
79	GO:0001085: RNA polymerase II transcription factor binding	1.43E-02
80	GO:0046873: metal ion transmembrane transporter activity	1.43E-02
81	GO:0030276: clathrin binding	1.43E-02
82	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.45E-02
83	GO:0004791: thioredoxin-disulfide reductase activity	1.51E-02
84	GO:0010181: FMN binding	1.51E-02
85	GO:0008194: UDP-glycosyltransferase activity	1.75E-02
86	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.99E-02
87	GO:0051213: dioxygenase activity	2.16E-02
88	GO:0008168: methyltransferase activity	2.33E-02
89	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.33E-02
90	GO:0004806: triglyceride lipase activity	2.42E-02
91	GO:0004683: calmodulin-dependent protein kinase activity	2.42E-02
92	GO:0005515: protein binding	2.48E-02
93	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.61E-02
94	GO:0005096: GTPase activator activity	2.70E-02
95	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.89E-02
96	GO:0019825: oxygen binding	3.13E-02
97	GO:0000149: SNARE binding	3.28E-02
98	GO:0051539: 4 iron, 4 sulfur cluster binding	3.38E-02
99	GO:0004722: protein serine/threonine phosphatase activity	3.93E-02
100	GO:0015293: symporter activity	4.01E-02
101	GO:0015171: amino acid transmembrane transporter activity	4.91E-02
102	GO:0031625: ubiquitin protein ligase binding	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0005674: transcription factor TFIIF complex	0.00E+00
2	GO:0016021: integral component of membrane	6.01E-07
3	GO:0005783: endoplasmic reticulum	7.59E-07
4	GO:0005789: endoplasmic reticulum membrane	3.05E-05
5	GO:0008250: oligosaccharyltransferase complex	3.58E-05
6	GO:0005886: plasma membrane	7.82E-05
7	GO:0045252: oxoglutarate dehydrogenase complex	1.69E-04
8	GO:0030665: clathrin-coated vesicle membrane	2.33E-04
9	GO:0070545: PeBoW complex	3.83E-04
10	GO:0030134: ER to Golgi transport vesicle	3.83E-04
11	GO:0005901: caveola	3.83E-04
12	GO:0005774: vacuolar membrane	3.98E-04
13	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	9.32E-04
14	GO:0009504: cell plate	1.44E-03
15	GO:0005945: 6-phosphofructokinase complex	1.50E-03
16	GO:0032580: Golgi cisterna membrane	1.87E-03
17	GO:0005794: Golgi apparatus	2.11E-03
18	GO:0005788: endoplasmic reticulum lumen	2.35E-03
19	GO:0005802: trans-Golgi network	2.53E-03
20	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	2.61E-03
21	GO:0030687: preribosome, large subunit precursor	2.61E-03
22	GO:0030131: clathrin adaptor complex	3.02E-03
23	GO:0016020: membrane	3.40E-03
24	GO:0031902: late endosome membrane	4.33E-03
25	GO:0017119: Golgi transport complex	4.87E-03
26	GO:0005834: heterotrimeric G-protein complex	7.97E-03
27	GO:0005769: early endosome	8.20E-03
28	GO:0005654: nucleoplasm	1.10E-02
29	GO:0005887: integral component of plasma membrane	1.44E-02
30	GO:0019898: extrinsic component of membrane	1.58E-02
31	GO:0005778: peroxisomal membrane	1.99E-02
32	GO:0000932: P-body	2.16E-02
33	GO:0005667: transcription factor complex	2.33E-02
34	GO:0019005: SCF ubiquitin ligase complex	2.61E-02
35	GO:0005730: nucleolus	3.06E-02
36	GO:0031201: SNARE complex	3.49E-02
37	GO:0005768: endosome	4.24E-02
38	GO:0005635: nuclear envelope	4.79E-02