co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G26290

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010378: temperature compensation of the circadian clock	0.00E+00
2	GO:0030644: cellular chloride ion homeostasis	0.00E+00
3	GO:1903508: positive regulation of nucleic acid-templated transcription	0.00E+00
4	GO:1903428: positive regulation of reactive oxygen species biosynthetic process	0.00E+00
5	GO:0009768: photosynthesis, light harvesting in photosystem I	3.89E-08
6	GO:0009645: response to low light intensity stimulus	1.09E-07
7	GO:0009409: response to cold	1.03E-06
8	GO:0018298: protein-chromophore linkage	1.12E-06
9	GO:0010218: response to far red light	1.39E-06
10	GO:0010114: response to red light	3.32E-06
11	GO:0009644: response to high light intensity	3.94E-06
12	GO:0010600: regulation of auxin biosynthetic process	4.03E-06
13	GO:0009416: response to light stimulus	7.31E-06
14	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.50E-05
15	GO:0009769: photosynthesis, light harvesting in photosystem II	2.06E-05
16	GO:0010928: regulation of auxin mediated signaling pathway	2.73E-05
17	GO:0007623: circadian rhythm	3.96E-05
18	GO:0015812: gamma-aminobutyric acid transport	6.26E-05
19	GO:0032958: inositol phosphate biosynthetic process	6.26E-05
20	GO:1990641: response to iron ion starvation	6.26E-05
21	GO:0009637: response to blue light	6.42E-05
22	GO:0009585: red, far-red light phototransduction	1.45E-04
23	GO:0051170: nuclear import	1.52E-04
24	GO:1902884: positive regulation of response to oxidative stress	1.52E-04
25	GO:0006101: citrate metabolic process	1.52E-04
26	GO:0006883: cellular sodium ion homeostasis	1.52E-04
27	GO:0015979: photosynthesis	1.65E-04
28	GO:0048511: rhythmic process	2.08E-04
29	GO:0010017: red or far-red light signaling pathway	2.29E-04
30	GO:0006598: polyamine catabolic process	2.57E-04
31	GO:1901562: response to paraquat	2.57E-04
32	GO:1902448: positive regulation of shade avoidance	2.57E-04
33	GO:0006351: transcription, DNA-templated	3.28E-04
34	GO:1901332: negative regulation of lateral root development	3.73E-04
35	GO:0006020: inositol metabolic process	3.73E-04
36	GO:1901002: positive regulation of response to salt stress	4.99E-04
37	GO:0030104: water homeostasis	4.99E-04
38	GO:0009765: photosynthesis, light harvesting	4.99E-04
39	GO:2000306: positive regulation of photomorphogenesis	4.99E-04
40	GO:0006355: regulation of transcription, DNA-templated	5.24E-04
41	GO:0010286: heat acclimation	5.47E-04
42	GO:0016123: xanthophyll biosynthetic process	6.32E-04
43	GO:0048578: positive regulation of long-day photoperiodism, flowering	6.32E-04
44	GO:0045962: positive regulation of development, heterochronic	7.73E-04
45	GO:0000160: phosphorelay signal transduction system	8.28E-04
46	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	9.20E-04
47	GO:0010161: red light signaling pathway	1.07E-03
48	GO:1900056: negative regulation of leaf senescence	1.07E-03
49	GO:0080167: response to karrikin	1.08E-03
50	GO:0042542: response to hydrogen peroxide	1.21E-03
51	GO:0009704: de-etiolation	1.24E-03
52	GO:0006102: isocitrate metabolic process	1.24E-03
53	GO:0009640: photomorphogenesis	1.26E-03
54	GO:0045892: negative regulation of transcription, DNA-templated	1.38E-03
55	GO:0010099: regulation of photomorphogenesis	1.41E-03
56	GO:0009827: plant-type cell wall modification	1.41E-03
57	GO:0090333: regulation of stomatal closure	1.58E-03
58	GO:0010380: regulation of chlorophyll biosynthetic process	1.77E-03
59	GO:0048354: mucilage biosynthetic process involved in seed coat development	1.77E-03
60	GO:0055062: phosphate ion homeostasis	1.96E-03
61	GO:0006535: cysteine biosynthetic process from serine	1.96E-03
62	GO:0009688: abscisic acid biosynthetic process	1.96E-03
63	GO:0009641: shade avoidance	1.96E-03
64	GO:0009970: cellular response to sulfate starvation	1.96E-03
65	GO:0046856: phosphatidylinositol dephosphorylation	2.17E-03
66	GO:0016925: protein sumoylation	2.37E-03
67	GO:0050826: response to freezing	2.58E-03
68	GO:0018107: peptidyl-threonine phosphorylation	2.58E-03
69	GO:0009718: anthocyanin-containing compound biosynthetic process	2.58E-03
70	GO:0009266: response to temperature stimulus	2.80E-03
71	GO:0090351: seedling development	3.03E-03
72	GO:0042023: DNA endoreduplication	3.26E-03
73	GO:0019344: cysteine biosynthetic process	3.49E-03
74	GO:0003333: amino acid transmembrane transport	3.98E-03
75	GO:0010431: seed maturation	3.98E-03
76	GO:0009269: response to desiccation	3.98E-03
77	GO:0009693: ethylene biosynthetic process	4.50E-03
78	GO:0071215: cellular response to abscisic acid stimulus	4.50E-03
79	GO:0045492: xylan biosynthetic process	4.76E-03
80	GO:0010182: sugar mediated signaling pathway	5.59E-03
81	GO:0006814: sodium ion transport	5.88E-03
82	GO:0042752: regulation of circadian rhythm	5.88E-03
83	GO:0009658: chloroplast organization	6.27E-03
84	GO:0000302: response to reactive oxygen species	6.46E-03
85	GO:1901657: glycosyl compound metabolic process	7.07E-03
86	GO:0055114: oxidation-reduction process	8.27E-03
87	GO:0044550: secondary metabolite biosynthetic process	8.45E-03
88	GO:0009414: response to water deprivation	8.62E-03
89	GO:0048573: photoperiodism, flowering	9.36E-03
90	GO:0015995: chlorophyll biosynthetic process	9.36E-03
91	GO:0009817: defense response to fungus, incompatible interaction	1.01E-02
92	GO:0009631: cold acclimation	1.11E-02
93	GO:0009910: negative regulation of flower development	1.11E-02
94	GO:0006629: lipid metabolic process	1.15E-02
95	GO:0009408: response to heat	1.15E-02
96	GO:0006099: tricarboxylic acid cycle	1.23E-02
97	GO:0008643: carbohydrate transport	1.50E-02
98	GO:0009965: leaf morphogenesis	1.54E-02
99	GO:0042538: hyperosmotic salinity response	1.67E-02
100	GO:0051603: proteolysis involved in cellular protein catabolic process	1.80E-02
101	GO:0006857: oligopeptide transport	1.84E-02
102	GO:0009908: flower development	1.85E-02
103	GO:0009909: regulation of flower development	1.89E-02
104	GO:0035556: intracellular signal transduction	2.16E-02
105	GO:0009624: response to nematode	2.25E-02
106	GO:0018105: peptidyl-serine phosphorylation	2.30E-02
107	GO:0009737: response to abscisic acid	2.31E-02
108	GO:0045893: positive regulation of transcription, DNA-templated	2.35E-02
109	GO:0000398: mRNA splicing, via spliceosome	2.50E-02
110	GO:0055085: transmembrane transport	2.60E-02
111	GO:0010228: vegetative to reproductive phase transition of meristem	3.44E-02
112	GO:0010468: regulation of gene expression	3.77E-02
113	GO:0009651: response to salt stress	4.07E-02
114	GO:0030154: cell differentiation	4.49E-02
115	GO:0006970: response to osmotic stress	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0004567: beta-mannosidase activity	0.00E+00
2	GO:0080082: esculin beta-glucosidase activity	0.00E+00
3	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
4	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
5	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
6	GO:0009540: zeaxanthin epoxidase [overall] activity	0.00E+00
7	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
8	GO:0031409: pigment binding	2.38E-08
9	GO:0016168: chlorophyll binding	6.92E-07
10	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	6.26E-05
11	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	6.26E-05
12	GO:0000829: inositol heptakisphosphate kinase activity	6.26E-05
13	GO:0080079: cellobiose glucosidase activity	6.26E-05
14	GO:0000978: RNA polymerase II core promoter proximal region sequence-specific DNA binding	6.26E-05
15	GO:0030371: translation repressor activity	6.26E-05
16	GO:0000828: inositol hexakisphosphate kinase activity	6.26E-05
17	GO:0015180: L-alanine transmembrane transporter activity	1.52E-04
18	GO:0003994: aconitate hydratase activity	1.52E-04
19	GO:0001078: transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding	1.52E-04
20	GO:0046592: polyamine oxidase activity	2.57E-04
21	GO:0019948: SUMO activating enzyme activity	2.57E-04
22	GO:0015181: arginine transmembrane transporter activity	3.73E-04
23	GO:0009001: serine O-acetyltransferase activity	3.73E-04
24	GO:0015189: L-lysine transmembrane transporter activity	3.73E-04
25	GO:0048027: mRNA 5'-UTR binding	3.73E-04
26	GO:0000156: phosphorelay response regulator activity	4.86E-04
27	GO:0005313: L-glutamate transmembrane transporter activity	4.99E-04
28	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	6.32E-04
29	GO:0005515: protein binding	1.38E-03
30	GO:0000989: transcription factor activity, transcription factor binding	1.58E-03
31	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	1.58E-03
32	GO:0071949: FAD binding	1.58E-03
33	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	1.96E-03
34	GO:0047372: acylglycerol lipase activity	2.17E-03
35	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	2.37E-03
36	GO:0004022: alcohol dehydrogenase (NAD) activity	2.58E-03
37	GO:0005315: inorganic phosphate transmembrane transporter activity	2.58E-03
38	GO:0004565: beta-galactosidase activity	2.58E-03
39	GO:0008131: primary amine oxidase activity	2.80E-03
40	GO:0003712: transcription cofactor activity	3.03E-03
41	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.04E-03
42	GO:0005351: sugar:proton symporter activity	3.97E-03
43	GO:0004707: MAP kinase activity	3.98E-03
44	GO:0008514: organic anion transmembrane transporter activity	4.76E-03
45	GO:0003700: transcription factor activity, sequence-specific DNA binding	5.39E-03
46	GO:0004497: monooxygenase activity	7.77E-03
47	GO:0003677: DNA binding	8.18E-03
48	GO:0102483: scopolin beta-glucosidase activity	9.36E-03
49	GO:0005215: transporter activity	1.01E-02
50	GO:0046872: metal ion binding	1.25E-02
51	GO:0008422: beta-glucosidase activity	1.26E-02
52	GO:0051539: 4 iron, 4 sulfur cluster binding	1.30E-02
53	GO:0015293: symporter activity	1.54E-02
54	GO:0015171: amino acid transmembrane transporter activity	1.89E-02
55	GO:0045735: nutrient reservoir activity	1.98E-02
56	GO:0016874: ligase activity	2.16E-02
57	GO:0019825: oxygen binding	2.91E-02
58	GO:0015144: carbohydrate transmembrane transporter activity	3.01E-02
59	GO:0015297: antiporter activity	3.22E-02
60	GO:0008270: zinc ion binding	3.67E-02
61	GO:0005506: iron ion binding	4.07E-02
62	GO:0044212: transcription regulatory region DNA binding	4.13E-02
63	GO:0008168: methyltransferase activity	4.42E-02
64	GO:0003824: catalytic activity	4.53E-02

Rank	GO Term	Adjusted P value
1	GO:0030076: light-harvesting complex	1.82E-08
2	GO:0009522: photosystem I	1.88E-07
3	GO:0010287: plastoglobule	6.50E-07
4	GO:0009523: photosystem II	1.42E-05
5	GO:0009535: chloroplast thylakoid membrane	5.46E-05
6	GO:0009579: thylakoid	1.24E-04
7	GO:0009941: chloroplast envelope	3.66E-04
8	GO:0016021: integral component of membrane	4.31E-04
9	GO:0009898: cytoplasmic side of plasma membrane	4.99E-04
10	GO:0009517: PSII associated light-harvesting complex II	4.99E-04
11	GO:0009534: chloroplast thylakoid	8.30E-04
12	GO:0042651: thylakoid membrane	3.74E-03
13	GO:0031969: chloroplast membrane	7.77E-03
14	GO:0016020: membrane	1.24E-02
15	GO:0031966: mitochondrial membrane	1.67E-02
16	GO:0016607: nuclear speck	2.02E-02
17	GO:0005773: vacuole	2.24E-02
18	GO:0009706: chloroplast inner membrane	2.25E-02
19	GO:0005654: nucleoplasm	2.60E-02
20	GO:0005623: cell	2.70E-02
21	GO:0005774: vacuolar membrane	4.23E-02