Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G25410

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0030388: fructose 1,6-bisphosphate metabolic process0.00E+00
2GO:0033614: chloroplast proton-transporting ATP synthase complex assembly0.00E+00
3GO:0080114: positive regulation of glycine hydroxymethyltransferase activity0.00E+00
4GO:0044154: histone H3-K14 acetylation0.00E+00
5GO:0042820: vitamin B6 catabolic process0.00E+00
6GO:0043972: histone H3-K23 acetylation0.00E+00
7GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene0.00E+00
8GO:0061635: regulation of protein complex stability0.00E+00
9GO:0046838: phosphorylated carbohydrate dephosphorylation0.00E+00
10GO:0006428: isoleucyl-tRNA aminoacylation0.00E+00
11GO:0042821: pyridoxal biosynthetic process0.00E+00
12GO:0005996: monosaccharide metabolic process0.00E+00
13GO:0035970: peptidyl-threonine dephosphorylation0.00E+00
14GO:0019284: L-methionine salvage from S-adenosylmethionine0.00E+00
15GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
16GO:0006399: tRNA metabolic process0.00E+00
17GO:0090042: tubulin deacetylation0.00E+00
18GO:0019265: glycine biosynthetic process, by transamination of glyoxylate0.00E+00
19GO:0009773: photosynthetic electron transport in photosystem I1.28E-11
20GO:0015979: photosynthesis8.58E-10
21GO:0009658: chloroplast organization1.45E-09
22GO:0071482: cellular response to light stimulus1.05E-08
23GO:0006000: fructose metabolic process1.35E-07
24GO:0005986: sucrose biosynthetic process1.93E-07
25GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly6.43E-07
26GO:0009735: response to cytokinin4.48E-06
27GO:0009853: photorespiration5.60E-06
28GO:0006094: gluconeogenesis8.12E-06
29GO:0019253: reductive pentose-phosphate cycle1.06E-05
30GO:1902326: positive regulation of chlorophyll biosynthetic process1.18E-05
31GO:0010027: thylakoid membrane organization2.19E-05
32GO:0048564: photosystem I assembly3.04E-05
33GO:0006002: fructose 6-phosphate metabolic process4.28E-05
34GO:0032544: plastid translation4.28E-05
35GO:0016117: carotenoid biosynthetic process6.45E-05
36GO:2001141: regulation of RNA biosynthetic process8.48E-05
37GO:0019252: starch biosynthetic process1.13E-04
38GO:0006352: DNA-templated transcription, initiation1.22E-04
39GO:0006810: transport1.42E-04
40GO:0006546: glycine catabolic process1.46E-04
41GO:0019464: glycine decarboxylation via glycine cleavage system1.46E-04
42GO:0045727: positive regulation of translation1.46E-04
43GO:0010021: amylopectin biosynthetic process1.46E-04
44GO:0005983: starch catabolic process1.49E-04
45GO:0055114: oxidation-reduction process1.69E-04
46GO:0009767: photosynthetic electron transport chain1.81E-04
47GO:0010020: chloroplast fission2.15E-04
48GO:0042549: photosystem II stabilization3.16E-04
49GO:0018298: protein-chromophore linkage3.78E-04
50GO:0009443: pyridoxal 5'-phosphate salvage5.18E-04
51GO:0071588: hydrogen peroxide mediated signaling pathway5.18E-04
52GO:0000023: maltose metabolic process5.18E-04
53GO:0070509: calcium ion import5.18E-04
54GO:0007263: nitric oxide mediated signal transduction5.18E-04
55GO:0046900: tetrahydrofolylpolyglutamate metabolic process5.18E-04
56GO:0010362: negative regulation of anion channel activity by blue light5.18E-04
57GO:1904966: positive regulation of vitamin E biosynthetic process5.18E-04
58GO:1904964: positive regulation of phytol biosynthetic process5.18E-04
59GO:0080051: cutin transport5.18E-04
60GO:0033481: galacturonate biosynthetic process5.18E-04
61GO:0043971: histone H3-K18 acetylation5.18E-04
62GO:0080093: regulation of photorespiration5.18E-04
63GO:0051775: response to redox state5.18E-04
64GO:0031998: regulation of fatty acid beta-oxidation5.18E-04
65GO:0071277: cellular response to calcium ion5.18E-04
66GO:0010196: nonphotochemical quenching5.41E-04
67GO:0009704: de-etiolation6.75E-04
68GO:0008610: lipid biosynthetic process6.75E-04
69GO:0009657: plastid organization8.22E-04
70GO:0009409: response to cold9.79E-04
71GO:0000373: Group II intron splicing9.82E-04
72GO:0009629: response to gravity1.11E-03
73GO:0010270: photosystem II oxygen evolving complex assembly1.11E-03
74GO:0080005: photosystem stoichiometry adjustment1.11E-03
75GO:0010275: NAD(P)H dehydrogenase complex assembly1.11E-03
76GO:0007154: cell communication1.11E-03
77GO:0009662: etioplast organization1.11E-03
78GO:0097054: L-glutamate biosynthetic process1.11E-03
79GO:1904143: positive regulation of carotenoid biosynthetic process1.11E-03
80GO:0015908: fatty acid transport1.11E-03
81GO:0080183: response to photooxidative stress1.11E-03
82GO:0034755: iron ion transmembrane transport1.11E-03
83GO:0045036: protein targeting to chloroplast1.35E-03
84GO:0018119: peptidyl-cysteine S-nitrosylation1.56E-03
85GO:0006415: translational termination1.56E-03
86GO:0045910: negative regulation of DNA recombination1.82E-03
87GO:0000913: preprophase band assembly1.82E-03
88GO:0006518: peptide metabolic process1.82E-03
89GO:0031022: nuclear migration along microfilament1.82E-03
90GO:0051604: protein maturation1.82E-03
91GO:0006696: ergosterol biosynthetic process1.82E-03
92GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition1.82E-03
93GO:0006108: malate metabolic process2.03E-03
94GO:0009416: response to light stimulus2.07E-03
95GO:0010207: photosystem II assembly2.29E-03
96GO:0090351: seedling development2.57E-03
97GO:0006537: glutamate biosynthetic process2.64E-03
98GO:0009152: purine ribonucleotide biosynthetic process2.64E-03
99GO:0010731: protein glutathionylation2.64E-03
100GO:0046653: tetrahydrofolate metabolic process2.64E-03
101GO:0006107: oxaloacetate metabolic process2.64E-03
102GO:0043572: plastid fission2.64E-03
103GO:0016556: mRNA modification2.64E-03
104GO:0006020: inositol metabolic process2.64E-03
105GO:0009637: response to blue light3.29E-03
106GO:0009768: photosynthesis, light harvesting in photosystem I3.51E-03
107GO:0031122: cytoplasmic microtubule organization3.56E-03
108GO:0006021: inositol biosynthetic process3.56E-03
109GO:0015994: chlorophyll metabolic process3.56E-03
110GO:0071483: cellular response to blue light3.56E-03
111GO:0006734: NADH metabolic process3.56E-03
112GO:0009902: chloroplast relocation3.56E-03
113GO:0010222: stem vascular tissue pattern formation3.56E-03
114GO:0019676: ammonia assimilation cycle3.56E-03
115GO:0046686: response to cadmium ion3.82E-03
116GO:0061077: chaperone-mediated protein folding3.86E-03
117GO:0016226: iron-sulfur cluster assembly4.23E-03
118GO:0080110: sporopollenin biosynthetic process4.57E-03
119GO:0009247: glycolipid biosynthetic process4.57E-03
120GO:0006564: L-serine biosynthetic process4.57E-03
121GO:0009904: chloroplast accumulation movement4.57E-03
122GO:0045038: protein import into chloroplast thylakoid membrane4.57E-03
123GO:0016120: carotene biosynthetic process4.57E-03
124GO:0006097: glyoxylate cycle4.57E-03
125GO:0006544: glycine metabolic process4.57E-03
126GO:0006656: phosphatidylcholine biosynthetic process4.57E-03
127GO:0006461: protein complex assembly4.57E-03
128GO:0043097: pyrimidine nucleoside salvage4.57E-03
129GO:0016123: xanthophyll biosynthetic process4.57E-03
130GO:0007623: circadian rhythm5.07E-03
131GO:0010190: cytochrome b6f complex assembly5.66E-03
132GO:0006086: acetyl-CoA biosynthetic process from pyruvate5.66E-03
133GO:0010358: leaf shaping5.66E-03
134GO:0006828: manganese ion transport5.66E-03
135GO:0006563: L-serine metabolic process5.66E-03
136GO:0006206: pyrimidine nucleobase metabolic process5.66E-03
137GO:0010304: PSII associated light-harvesting complex II catabolic process5.66E-03
138GO:0046855: inositol phosphate dephosphorylation5.66E-03
139GO:0009913: epidermal cell differentiation5.66E-03
140GO:0042631: cellular response to water deprivation5.90E-03
141GO:0042335: cuticle development5.90E-03
142GO:0042391: regulation of membrane potential5.90E-03
143GO:0009741: response to brassinosteroid6.36E-03
144GO:0006364: rRNA processing6.67E-03
145GO:0019509: L-methionine salvage from methylthioadenosine6.83E-03
146GO:0006458: 'de novo' protein folding6.83E-03
147GO:0009903: chloroplast avoidance movement6.83E-03
148GO:0030488: tRNA methylation6.83E-03
149GO:0042026: protein refolding6.83E-03
150GO:0009854: oxidative photosynthetic carbon pathway6.83E-03
151GO:0010019: chloroplast-nucleus signaling pathway6.83E-03
152GO:1901259: chloroplast rRNA processing6.83E-03
153GO:0009791: post-embryonic development7.35E-03
154GO:0009645: response to low light intensity stimulus8.09E-03
155GO:0006400: tRNA modification8.09E-03
156GO:0006614: SRP-dependent cotranslational protein targeting to membrane8.09E-03
157GO:0050829: defense response to Gram-negative bacterium8.09E-03
158GO:0006096: glycolytic process8.27E-03
159GO:0016032: viral process8.41E-03
160GO:0009626: plant-type hypersensitive response8.97E-03
161GO:0006508: proteolysis9.18E-03
162GO:0019375: galactolipid biosynthetic process9.42E-03
163GO:0005978: glycogen biosynthetic process9.42E-03
164GO:0071805: potassium ion transmembrane transport1.02E-02
165GO:0006075: (1->3)-beta-D-glucan biosynthetic process1.08E-02
166GO:0006457: protein folding1.08E-02
167GO:0044030: regulation of DNA methylation1.08E-02
168GO:0017004: cytochrome complex assembly1.08E-02
169GO:0010206: photosystem II repair1.23E-02
170GO:0034765: regulation of ion transmembrane transport1.23E-02
171GO:0090333: regulation of stomatal closure1.23E-02
172GO:0006098: pentose-phosphate shunt1.23E-02
173GO:0009821: alkaloid biosynthetic process1.23E-02
174GO:0015995: chlorophyll biosynthetic process1.35E-02
175GO:0080167: response to karrikin1.37E-02
176GO:0010205: photoinhibition1.38E-02
177GO:0009638: phototropism1.38E-02
178GO:0035999: tetrahydrofolate interconversion1.38E-02
179GO:1900865: chloroplast RNA modification1.38E-02
180GO:0005982: starch metabolic process1.38E-02
181GO:0042761: very long-chain fatty acid biosynthetic process1.38E-02
182GO:0009058: biosynthetic process1.50E-02
183GO:0046777: protein autophosphorylation1.51E-02
184GO:0006535: cysteine biosynthetic process from serine1.55E-02
185GO:0019538: protein metabolic process1.55E-02
186GO:0006298: mismatch repair1.55E-02
187GO:0000160: phosphorelay signal transduction system1.57E-02
188GO:0019684: photosynthesis, light reaction1.71E-02
189GO:0000038: very long-chain fatty acid metabolic process1.71E-02
190GO:0009073: aromatic amino acid family biosynthetic process1.71E-02
191GO:0006879: cellular iron ion homeostasis1.71E-02
192GO:0006816: calcium ion transport1.71E-02
193GO:0000272: polysaccharide catabolic process1.71E-02
194GO:0009750: response to fructose1.71E-02
195GO:0009631: cold acclimation1.73E-02
196GO:0006790: sulfur compound metabolic process1.89E-02
197GO:0006099: tricarboxylic acid cycle1.99E-02
198GO:0010628: positive regulation of gene expression2.07E-02
199GO:0010588: cotyledon vascular tissue pattern formation2.07E-02
200GO:0006006: glucose metabolic process2.07E-02
201GO:0006541: glutamine metabolic process2.25E-02
202GO:0032259: methylation2.30E-02
203GO:0005975: carbohydrate metabolic process2.31E-02
204GO:0009225: nucleotide-sugar metabolic process2.44E-02
205GO:0080188: RNA-directed DNA methylation2.44E-02
206GO:0005985: sucrose metabolic process2.44E-02
207GO:0046854: phosphatidylinositol phosphorylation2.44E-02
208GO:0010114: response to red light2.45E-02
209GO:0009744: response to sucrose2.45E-02
210GO:0042742: defense response to bacterium2.54E-02
211GO:0010025: wax biosynthetic process2.64E-02
212GO:0019762: glucosinolate catabolic process2.64E-02
213GO:0009636: response to toxic substance2.76E-02
214GO:0019344: cysteine biosynthetic process2.84E-02
215GO:0016575: histone deacetylation3.05E-02
216GO:0006418: tRNA aminoacylation for protein translation3.05E-02
217GO:0007017: microtubule-based process3.05E-02
218GO:0009269: response to desiccation3.26E-02
219GO:0080092: regulation of pollen tube growth3.48E-02
220GO:0006730: one-carbon metabolic process3.48E-02
221GO:0019748: secondary metabolic process3.48E-02
222GO:0010584: pollen exine formation3.93E-02
223GO:0070417: cellular response to cold4.16E-02
224GO:0010118: stomatal movement4.40E-02
225GO:0006520: cellular amino acid metabolic process4.64E-02
226GO:0010268: brassinosteroid homeostasis4.64E-02
227GO:0008360: regulation of cell shape4.64E-02
228GO:0009646: response to absence of light4.88E-02
229GO:0048544: recognition of pollen4.88E-02
230GO:0015986: ATP synthesis coupled proton transport4.88E-02
231GO:0007018: microtubule-based movement4.88E-02
232GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.92E-02
RankGO TermAdjusted P value
1GO:0005048: signal sequence binding0.00E+00
2GO:0016719: carotene 7,8-desaturase activity0.00E+00
3GO:0046608: carotenoid isomerase activity0.00E+00
4GO:0052667: phosphomethylethanolamine N-methyltransferase activity0.00E+00
5GO:0036361: racemase activity, acting on amino acids and derivatives0.00E+00
6GO:0005222: intracellular cAMP activated cation channel activity0.00E+00
7GO:0046570: methylthioribulose 1-phosphate dehydratase activity0.00E+00
8GO:0043874: acireductone synthase activity0.00E+00
9GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity0.00E+00
10GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
11GO:0043014: alpha-tubulin binding0.00E+00
12GO:0046554: malate dehydrogenase (NADP+) activity0.00E+00
13GO:0008974: phosphoribulokinase activity0.00E+00
14GO:0005363: maltose transmembrane transporter activity0.00E+00
15GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
16GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives0.00E+00
17GO:0051721: protein phosphatase 2A binding0.00E+00
18GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity0.00E+00
19GO:0008465: glycerate dehydrogenase activity0.00E+00
20GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity0.00E+00
21GO:0046408: chlorophyll synthetase activity0.00E+00
22GO:0042903: tubulin deacetylase activity0.00E+00
23GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity0.00E+00
24GO:0004822: isoleucine-tRNA ligase activity0.00E+00
25GO:0004760: serine-pyruvate transaminase activity0.00E+00
26GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
27GO:0046905: phytoene synthase activity0.00E+00
28GO:0102193: protein-ribulosamine 3-kinase activity0.00E+00
29GO:0051738: xanthophyll binding0.00E+00
30GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
31GO:0050281: serine-glyoxylate transaminase activity0.00E+00
32GO:0004033: aldo-keto reductase (NADP) activity5.32E-07
33GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.84E-06
34GO:0016987: sigma factor activity1.84E-06
35GO:0001053: plastid sigma factor activity1.84E-06
36GO:0004222: metalloendopeptidase activity3.68E-06
37GO:0050307: sucrose-phosphate phosphatase activity3.97E-05
38GO:0016149: translation release factor activity, codon specific8.48E-05
39GO:0048038: quinone binding1.28E-04
40GO:0009011: starch synthase activity1.46E-04
41GO:0031072: heat shock protein binding1.81E-04
42GO:0008266: poly(U) RNA binding2.15E-04
43GO:0016168: chlorophyll binding2.69E-04
44GO:0016615: malate dehydrogenase activity3.16E-04
45GO:0051536: iron-sulfur cluster binding3.39E-04
46GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity4.22E-04
47GO:0030060: L-malate dehydrogenase activity4.22E-04
48GO:0005242: inward rectifier potassium channel activity4.22E-04
49GO:0051082: unfolded protein binding4.43E-04
50GO:0009496: plastoquinol--plastocyanin reductase activity5.18E-04
51GO:0008568: microtubule-severing ATPase activity5.18E-04
52GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity5.18E-04
53GO:0070006: metalloaminopeptidase activity5.18E-04
54GO:0019203: carbohydrate phosphatase activity5.18E-04
55GO:0005080: protein kinase C binding5.18E-04
56GO:0008242: omega peptidase activity5.18E-04
57GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity5.18E-04
58GO:0050308: sugar-phosphatase activity5.18E-04
59GO:0008746: NAD(P)+ transhydrogenase activity5.18E-04
60GO:0015245: fatty acid transporter activity5.18E-04
61GO:0016041: glutamate synthase (ferredoxin) activity5.18E-04
62GO:0003867: 4-aminobutyrate transaminase activity5.18E-04
63GO:0030941: chloroplast targeting sequence binding5.18E-04
64GO:0005221: intracellular cyclic nucleotide activated cation channel activity5.18E-04
65GO:0051996: squalene synthase activity5.18E-04
66GO:0010012: steroid 22-alpha hydroxylase activity5.18E-04
67GO:0003824: catalytic activity5.44E-04
68GO:0050662: coenzyme binding9.10E-04
69GO:0005198: structural molecule activity9.72E-04
70GO:0003747: translation release factor activity9.82E-04
71GO:0004617: phosphoglycerate dehydrogenase activity1.11E-03
72GO:0003844: 1,4-alpha-glucan branching enzyme activity1.11E-03
73GO:0016630: protochlorophyllide reductase activity1.11E-03
74GO:0004047: aminomethyltransferase activity1.11E-03
75GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity1.11E-03
76GO:0052832: inositol monophosphate 3-phosphatase activity1.11E-03
77GO:0033201: alpha-1,4-glucan synthase activity1.11E-03
78GO:0034722: gamma-glutamyl-peptidase activity1.11E-03
79GO:0004310: farnesyl-diphosphate farnesyltransferase activity1.11E-03
80GO:0000234: phosphoethanolamine N-methyltransferase activity1.11E-03
81GO:0008805: carbon-monoxide oxygenase activity1.11E-03
82GO:0008934: inositol monophosphate 1-phosphatase activity1.11E-03
83GO:0052833: inositol monophosphate 4-phosphatase activity1.11E-03
84GO:0050017: L-3-cyanoalanine synthase activity1.11E-03
85GO:0010291: carotene beta-ring hydroxylase activity1.11E-03
86GO:0047746: chlorophyllase activity1.11E-03
87GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity1.11E-03
88GO:0010297: heteropolysaccharide binding1.11E-03
89GO:0008967: phosphoglycolate phosphatase activity1.11E-03
90GO:0004326: tetrahydrofolylpolyglutamate synthase activity1.11E-03
91GO:0016787: hydrolase activity1.37E-03
92GO:0008237: metallopeptidase activity1.49E-03
93GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity1.82E-03
94GO:0070330: aromatase activity1.82E-03
95GO:0043169: cation binding1.82E-03
96GO:0004373: glycogen (starch) synthase activity1.82E-03
97GO:0030267: glyoxylate reductase (NADP) activity1.82E-03
98GO:0002161: aminoacyl-tRNA editing activity1.82E-03
99GO:0032947: protein complex scaffold1.82E-03
100GO:0004148: dihydrolipoyl dehydrogenase activity1.82E-03
101GO:0016742: hydroxymethyl-, formyl- and related transferase activity1.82E-03
102GO:0070402: NADPH binding1.82E-03
103GO:0008864: formyltetrahydrofolate deformylase activity1.82E-03
104GO:0016491: oxidoreductase activity2.48E-03
105GO:0035250: UDP-galactosyltransferase activity2.64E-03
106GO:0048487: beta-tubulin binding2.64E-03
107GO:0004375: glycine dehydrogenase (decarboxylating) activity2.64E-03
108GO:0009882: blue light photoreceptor activity2.64E-03
109GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity2.64E-03
110GO:0031409: pigment binding2.87E-03
111GO:0019843: rRNA binding3.10E-03
112GO:0005528: FK506 binding3.18E-03
113GO:0015079: potassium ion transmembrane transporter activity3.51E-03
114GO:0051861: glycolipid binding3.56E-03
115GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity3.56E-03
116GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity3.56E-03
117GO:0008453: alanine-glyoxylate transaminase activity3.56E-03
118GO:0050378: UDP-glucuronate 4-epimerase activity3.56E-03
119GO:0010385: double-stranded methylated DNA binding3.56E-03
120GO:0043495: protein anchor3.56E-03
121GO:0005319: lipid transporter activity3.56E-03
122GO:0004176: ATP-dependent peptidase activity3.86E-03
123GO:0004372: glycine hydroxymethyltransferase activity4.57E-03
124GO:0003959: NADPH dehydrogenase activity4.57E-03
125GO:0008374: O-acyltransferase activity4.57E-03
126GO:0018685: alkane 1-monooxygenase activity4.57E-03
127GO:0051538: 3 iron, 4 sulfur cluster binding4.57E-03
128GO:0022891: substrate-specific transmembrane transporter activity4.62E-03
129GO:0003755: peptidyl-prolyl cis-trans isomerase activity5.55E-03
130GO:0080030: methyl indole-3-acetate esterase activity5.66E-03
131GO:0004332: fructose-bisphosphate aldolase activity5.66E-03
132GO:0016688: L-ascorbate peroxidase activity5.66E-03
133GO:0004130: cytochrome-c peroxidase activity5.66E-03
134GO:0042578: phosphoric ester hydrolase activity5.66E-03
135GO:2001070: starch binding5.66E-03
136GO:0030983: mismatched DNA binding5.66E-03
137GO:0051287: NAD binding5.82E-03
138GO:0030551: cyclic nucleotide binding5.90E-03
139GO:0003899: DNA-directed 5'-3' RNA polymerase activity6.67E-03
140GO:0004124: cysteine synthase activity6.83E-03
141GO:0004849: uridine kinase activity6.83E-03
142GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity6.83E-03
143GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity6.83E-03
144GO:0004723: calcium-dependent protein serine/threonine phosphatase activity6.83E-03
145GO:0005261: cation channel activity6.83E-03
146GO:0042802: identical protein binding7.31E-03
147GO:0003924: GTPase activity7.35E-03
148GO:0019899: enzyme binding8.09E-03
149GO:0004620: phospholipase activity8.09E-03
150GO:0004519: endonuclease activity8.51E-03
151GO:0046872: metal ion binding8.94E-03
152GO:0052747: sinapyl alcohol dehydrogenase activity9.42E-03
153GO:0008312: 7S RNA binding9.42E-03
154GO:0043022: ribosome binding9.42E-03
155GO:0005515: protein binding9.58E-03
156GO:0000287: magnesium ion binding9.59E-03
157GO:0003843: 1,3-beta-D-glucan synthase activity1.08E-02
158GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)1.08E-02
159GO:0015078: hydrogen ion transmembrane transporter activity1.08E-02
160GO:0008135: translation factor activity, RNA binding1.08E-02
161GO:0008138: protein tyrosine/serine/threonine phosphatase activity1.23E-02
162GO:0005381: iron ion transmembrane transporter activity1.38E-02
163GO:0016844: strictosidine synthase activity1.38E-02
164GO:0005384: manganese ion transmembrane transporter activity1.38E-02
165GO:0030234: enzyme regulator activity1.55E-02
166GO:0016887: ATPase activity1.57E-02
167GO:0047372: acylglycerol lipase activity1.71E-02
168GO:0005089: Rho guanyl-nucleotide exchange factor activity1.71E-02
169GO:0015386: potassium:proton antiporter activity1.71E-02
170GO:0004177: aminopeptidase activity1.71E-02
171GO:0044183: protein binding involved in protein folding1.71E-02
172GO:0005525: GTP binding1.72E-02
173GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.73E-02
174GO:0045551: cinnamyl-alcohol dehydrogenase activity1.89E-02
175GO:0000049: tRNA binding1.89E-02
176GO:0004022: alcohol dehydrogenase (NAD) activity2.07E-02
177GO:0015095: magnesium ion transmembrane transporter activity2.07E-02
178GO:0000155: phosphorelay sensor kinase activity2.07E-02
179GO:0005262: calcium channel activity2.07E-02
180GO:0005509: calcium ion binding2.18E-02
181GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.25E-02
182GO:0004364: glutathione transferase activity2.36E-02
183GO:0030553: cGMP binding2.44E-02
184GO:0030552: cAMP binding2.44E-02
185GO:0102336: 3-oxo-arachidoyl-CoA synthase activity2.64E-02
186GO:0102337: 3-oxo-cerotoyl-CoA synthase activity2.64E-02
187GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity2.64E-02
188GO:0043621: protein self-association2.66E-02
189GO:0051537: 2 iron, 2 sulfur cluster binding2.66E-02
190GO:0004407: histone deacetylase activity2.84E-02
191GO:0005216: ion channel activity3.05E-02
192GO:0043424: protein histidine kinase binding3.05E-02
193GO:0008168: methyltransferase activity3.46E-02
194GO:0003777: microtubule motor activity3.66E-02
195GO:0003756: protein disulfide isomerase activity3.93E-02
196GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups4.03E-02
197GO:0004812: aminoacyl-tRNA ligase activity4.16E-02
198GO:0050660: flavin adenine dinucleotide binding4.34E-02
199GO:0005249: voltage-gated potassium channel activity4.40E-02
200GO:0004402: histone acetyltransferase activity4.40E-02
201GO:0010181: FMN binding4.88E-02
RankGO TermAdjusted P value
1GO:0009575: chromoplast stroma0.00E+00
2GO:0009344: nitrite reductase complex [NAD(P)H]0.00E+00
3GO:0042579: microbody0.00E+00
4GO:0009571: proplastid stroma0.00E+00
5GO:0009507: chloroplast5.29E-81
6GO:0009535: chloroplast thylakoid membrane4.18E-45
7GO:0009570: chloroplast stroma9.77E-34
8GO:0009941: chloroplast envelope1.13E-32
9GO:0009534: chloroplast thylakoid1.83E-27
10GO:0009579: thylakoid9.77E-19
11GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)2.58E-17
12GO:0031969: chloroplast membrane4.99E-09
13GO:0009543: chloroplast thylakoid lumen5.89E-09
14GO:0009654: photosystem II oxygen evolving complex2.34E-08
15GO:0048046: apoplast1.03E-06
16GO:0019898: extrinsic component of membrane7.20E-06
17GO:0009706: chloroplast inner membrane7.23E-06
18GO:0030095: chloroplast photosystem II1.06E-05
19GO:0010287: plastoglobule1.26E-05
20GO:0010319: stromule1.64E-05
21GO:0009523: photosystem II1.13E-04
22GO:0042651: thylakoid membrane3.88E-04
23GO:0043190: ATP-binding cassette (ABC) transporter complex5.18E-04
24GO:0009782: photosystem I antenna complex5.18E-04
25GO:0009501: amyloplast6.75E-04
26GO:0000427: plastid-encoded plastid RNA polymerase complex1.11E-03
27GO:0031357: integral component of chloroplast inner membrane1.11E-03
28GO:0080085: signal recognition particle, chloroplast targeting1.11E-03
29GO:0009509: chromoplast1.82E-03
30GO:0009897: external side of plasma membrane1.82E-03
31GO:0016020: membrane2.09E-03
32GO:0030076: light-harvesting complex2.57E-03
33GO:0005960: glycine cleavage complex2.64E-03
34GO:0030286: dynein complex3.56E-03
35GO:0009526: plastid envelope3.56E-03
36GO:0009517: PSII associated light-harvesting complex II3.56E-03
37GO:0009532: plastid stroma3.86E-03
38GO:0031977: thylakoid lumen4.11E-03
39GO:0005759: mitochondrial matrix4.39E-03
40GO:0055035: plastid thylakoid membrane4.57E-03
41GO:0009512: cytochrome b6f complex4.57E-03
42GO:0009536: plastid5.63E-03
43GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)5.66E-03
44GO:0016021: integral component of membrane6.93E-03
45GO:0009533: chloroplast stromal thylakoid8.09E-03
46GO:0031359: integral component of chloroplast outer membrane8.09E-03
47GO:0009539: photosystem II reaction center1.08E-02
48GO:0005786: signal recognition particle, endoplasmic reticulum targeting1.08E-02
49GO:0000148: 1,3-beta-D-glucan synthase complex1.08E-02
50GO:0009707: chloroplast outer membrane1.50E-02
51GO:0016324: apical plasma membrane1.55E-02
52GO:0009508: plastid chromosome2.07E-02
53GO:0005819: spindle2.08E-02
54GO:0005875: microtubule associated complex2.64E-02
55GO:0005871: kinesin complex4.16E-02
56GO:0009522: photosystem I4.88E-02
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Gene type



Gene DE type