co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G24180

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010401: pectic galactan metabolic process	0.00E+00
2	GO:0019428: allantoin biosynthetic process	0.00E+00
3	GO:0032499: detection of peptidoglycan	0.00E+00
4	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
5	GO:0072660: maintenance of protein location in plasma membrane	0.00E+00
6	GO:0006468: protein phosphorylation	8.33E-08
7	GO:0042742: defense response to bacterium	3.46E-07
8	GO:0006952: defense response	3.17E-06
9	GO:0006517: protein deglycosylation	4.23E-06
10	GO:0000187: activation of MAPK activity	9.86E-06
11	GO:0060548: negative regulation of cell death	1.84E-05
12	GO:0031348: negative regulation of defense response	3.94E-05
13	GO:0010942: positive regulation of cell death	4.48E-05
14	GO:0051245: negative regulation of cellular defense response	1.52E-04
15	GO:0046938: phytochelatin biosynthetic process	1.52E-04
16	GO:0043687: post-translational protein modification	1.52E-04
17	GO:0055081: anion homeostasis	1.52E-04
18	GO:0002143: tRNA wobble position uridine thiolation	1.52E-04
19	GO:0032491: detection of molecule of fungal origin	1.52E-04
20	GO:0060862: negative regulation of floral organ abscission	1.52E-04
21	GO:0006144: purine nucleobase metabolic process	1.52E-04
22	GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine	1.52E-04
23	GO:0001560: regulation of cell growth by extracellular stimulus	1.52E-04
24	GO:0016337: single organismal cell-cell adhesion	1.52E-04
25	GO:0000077: DNA damage checkpoint	1.52E-04
26	GO:0019628: urate catabolic process	1.52E-04
27	GO:0043069: negative regulation of programmed cell death	2.36E-04
28	GO:0008219: cell death	2.52E-04
29	GO:0052541: plant-type cell wall cellulose metabolic process	3.47E-04
30	GO:0040020: regulation of meiotic nuclear division	3.47E-04
31	GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	3.47E-04
32	GO:0031349: positive regulation of defense response	3.47E-04
33	GO:0051258: protein polymerization	3.47E-04
34	GO:0015012: heparan sulfate proteoglycan biosynthetic process	3.47E-04
35	GO:0002221: pattern recognition receptor signaling pathway	3.47E-04
36	GO:0010155: regulation of proton transport	3.47E-04
37	GO:0010618: aerenchyma formation	3.47E-04
38	GO:0080181: lateral root branching	3.47E-04
39	GO:0006024: glycosaminoglycan biosynthetic process	3.47E-04
40	GO:0070588: calcium ion transmembrane transport	4.57E-04
41	GO:0015695: organic cation transport	5.68E-04
42	GO:0042344: indole glucosinolate catabolic process	5.68E-04
43	GO:1900140: regulation of seedling development	5.68E-04
44	GO:0072661: protein targeting to plasma membrane	5.68E-04
45	GO:0009814: defense response, incompatible interaction	7.43E-04
46	GO:0010227: floral organ abscission	8.07E-04
47	GO:0007276: gamete generation	8.13E-04
48	GO:0010148: transpiration	8.13E-04
49	GO:0006516: glycoprotein catabolic process	8.13E-04
50	GO:0015700: arsenite transport	8.13E-04
51	GO:0006612: protein targeting to membrane	8.13E-04
52	GO:0015696: ammonium transport	8.13E-04
53	GO:0071323: cellular response to chitin	8.13E-04
54	GO:0051289: protein homotetramerization	8.13E-04
55	GO:0001676: long-chain fatty acid metabolic process	8.13E-04
56	GO:0006515: misfolded or incompletely synthesized protein catabolic process	8.13E-04
57	GO:0007165: signal transduction	9.21E-04
58	GO:0009626: plant-type hypersensitive response	9.33E-04
59	GO:0009620: response to fungus	9.69E-04
60	GO:0042391: regulation of membrane potential	1.02E-03
61	GO:0072488: ammonium transmembrane transport	1.08E-03
62	GO:0010363: regulation of plant-type hypersensitive response	1.08E-03
63	GO:0071219: cellular response to molecule of bacterial origin	1.08E-03
64	GO:2000038: regulation of stomatal complex development	1.08E-03
65	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	1.08E-03
66	GO:0010188: response to microbial phytotoxin	1.08E-03
67	GO:0080142: regulation of salicylic acid biosynthetic process	1.08E-03
68	GO:0006623: protein targeting to vacuole	1.25E-03
69	GO:0010193: response to ozone	1.34E-03
70	GO:0000304: response to singlet oxygen	1.36E-03
71	GO:0018279: protein N-linked glycosylation via asparagine	1.36E-03
72	GO:0031365: N-terminal protein amino acid modification	1.36E-03
73	GO:0006665: sphingolipid metabolic process	1.36E-03
74	GO:0030163: protein catabolic process	1.52E-03
75	GO:0060918: auxin transport	1.67E-03
76	GO:0047484: regulation of response to osmotic stress	1.67E-03
77	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	1.67E-03
78	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.01E-03
79	GO:0006694: steroid biosynthetic process	2.01E-03
80	GO:2000037: regulation of stomatal complex patterning	2.01E-03
81	GO:0010310: regulation of hydrogen peroxide metabolic process	2.01E-03
82	GO:0009627: systemic acquired resistance	2.14E-03
83	GO:0043090: amino acid import	2.36E-03
84	GO:0071446: cellular response to salicylic acid stimulus	2.36E-03
85	GO:0009817: defense response to fungus, incompatible interaction	2.49E-03
86	GO:0007166: cell surface receptor signaling pathway	2.55E-03
87	GO:0009617: response to bacterium	2.69E-03
88	GO:0006491: N-glycan processing	2.73E-03
89	GO:0006102: isocitrate metabolic process	2.73E-03
90	GO:0010119: regulation of stomatal movement	2.88E-03
91	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	3.12E-03
92	GO:2000031: regulation of salicylic acid mediated signaling pathway	3.12E-03
93	GO:0006002: fructose 6-phosphate metabolic process	3.12E-03
94	GO:0010332: response to gamma radiation	3.53E-03
95	GO:0010112: regulation of systemic acquired resistance	3.53E-03
96	GO:0046685: response to arsenic-containing substance	3.53E-03
97	GO:0006887: exocytosis	3.74E-03
98	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	3.96E-03
99	GO:0006032: chitin catabolic process	4.40E-03
100	GO:0015031: protein transport	4.47E-03
101	GO:0052544: defense response by callose deposition in cell wall	4.86E-03
102	GO:0019684: photosynthesis, light reaction	4.86E-03
103	GO:0000165: MAPK cascade	4.90E-03
104	GO:0080167: response to karrikin	4.91E-03
105	GO:0010200: response to chitin	5.13E-03
106	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	5.13E-03
107	GO:0046777: protein autophosphorylation	5.35E-03
108	GO:0010102: lateral root morphogenesis	5.83E-03
109	GO:0010229: inflorescence development	5.83E-03
110	GO:0006886: intracellular protein transport	6.42E-03
111	GO:0010053: root epidermal cell differentiation	6.86E-03
112	GO:0034976: response to endoplasmic reticulum stress	7.40E-03
113	GO:0009863: salicylic acid mediated signaling pathway	7.95E-03
114	GO:0030150: protein import into mitochondrial matrix	7.95E-03
115	GO:0006487: protein N-linked glycosylation	7.95E-03
116	GO:0009742: brassinosteroid mediated signaling pathway	8.23E-03
117	GO:0051302: regulation of cell division	8.51E-03
118	GO:0048278: vesicle docking	9.10E-03
119	GO:0016998: cell wall macromolecule catabolic process	9.10E-03
120	GO:0015992: proton transport	9.10E-03
121	GO:0009306: protein secretion	1.09E-02
122	GO:0042147: retrograde transport, endosome to Golgi	1.16E-02
123	GO:0010051: xylem and phloem pattern formation	1.22E-02
124	GO:0010087: phloem or xylem histogenesis	1.22E-02
125	GO:0008360: regulation of cell shape	1.29E-02
126	GO:0010197: polar nucleus fusion	1.29E-02
127	GO:0061025: membrane fusion	1.36E-02
128	GO:0010183: pollen tube guidance	1.42E-02
129	GO:0006470: protein dephosphorylation	1.54E-02
130	GO:0010468: regulation of gene expression	1.61E-02
131	GO:0006904: vesicle docking involved in exocytosis	1.79E-02
132	GO:0001666: response to hypoxia	1.94E-02
133	GO:0009615: response to virus	1.94E-02
134	GO:0009607: response to biotic stimulus	2.02E-02
135	GO:0006906: vesicle fusion	2.10E-02
136	GO:0010311: lateral root formation	2.43E-02
137	GO:0006499: N-terminal protein myristoylation	2.51E-02
138	GO:0009631: cold acclimation	2.60E-02
139	GO:0006865: amino acid transport	2.69E-02
140	GO:0016192: vesicle-mediated transport	2.72E-02
141	GO:0009867: jasmonic acid mediated signaling pathway	2.78E-02
142	GO:0045087: innate immune response	2.78E-02
143	GO:0006099: tricarboxylic acid cycle	2.86E-02
144	GO:0006631: fatty acid metabolic process	3.14E-02
145	GO:0010114: response to red light	3.32E-02
146	GO:0009737: response to abscisic acid	3.45E-02
147	GO:0008643: carbohydrate transport	3.52E-02
148	GO:0032259: methylation	3.65E-02
149	GO:0009751: response to salicylic acid	3.76E-02
150	GO:0031347: regulation of defense response	3.81E-02
151	GO:0006629: lipid metabolic process	3.81E-02
152	GO:0006486: protein glycosylation	4.11E-02
153	GO:0006096: glycolytic process	4.63E-02

Rank	GO Term	Adjusted P value
1	GO:0004164: diphthine synthase activity	0.00E+00
2	GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity	0.00E+00
3	GO:0061605: molybdopterin-synthase adenylyltransferase activity	0.00E+00
4	GO:2001080: chitosan binding	0.00E+00
5	GO:0033971: hydroxyisourate hydrolase activity	0.00E+00
6	GO:0051997: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity	0.00E+00
7	GO:0061604: molybdopterin-synthase sulfurtransferase activity	0.00E+00
8	GO:0016301: kinase activity	2.20E-09
9	GO:0004674: protein serine/threonine kinase activity	2.44E-07
10	GO:0005524: ATP binding	1.02E-06
11	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.45E-06
12	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	3.00E-05
13	GO:0005516: calmodulin binding	7.65E-05
14	GO:0004708: MAP kinase kinase activity	1.08E-04
15	GO:0015085: calcium ion transmembrane transporter activity	1.52E-04
16	GO:0046870: cadmium ion binding	1.52E-04
17	GO:0015446: ATPase-coupled arsenite transmembrane transporter activity	1.52E-04
18	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	1.52E-04
19	GO:0071992: phytochelatin transmembrane transporter activity	1.52E-04
20	GO:0043021: ribonucleoprotein complex binding	3.47E-04
21	GO:0005388: calcium-transporting ATPase activity	3.61E-04
22	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.61E-04
23	GO:0004190: aspartic-type endopeptidase activity	4.57E-04
24	GO:0030552: cAMP binding	4.57E-04
25	GO:0030553: cGMP binding	4.57E-04
26	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	5.68E-04
27	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	5.68E-04
28	GO:0005216: ion channel activity	6.20E-04
29	GO:0033612: receptor serine/threonine kinase binding	6.79E-04
30	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	8.13E-04
31	GO:0004449: isocitrate dehydrogenase (NAD+) activity	8.13E-04
32	GO:0009678: hydrogen-translocating pyrophosphatase activity	8.13E-04
33	GO:0004792: thiosulfate sulfurtransferase activity	8.13E-04
34	GO:0030551: cyclic nucleotide binding	1.02E-03
35	GO:0005249: voltage-gated potassium channel activity	1.02E-03
36	GO:0019199: transmembrane receptor protein kinase activity	1.08E-03
37	GO:0043495: protein anchor	1.08E-03
38	GO:0004576: oligosaccharyl transferase activity	1.08E-03
39	GO:0008641: small protein activating enzyme activity	1.36E-03
40	GO:0008519: ammonium transmembrane transporter activity	1.67E-03
41	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.71E-03
42	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.97E-03
43	GO:0102391: decanoate--CoA ligase activity	2.01E-03
44	GO:0004012: phospholipid-translocating ATPase activity	2.01E-03
45	GO:0005261: cation channel activity	2.01E-03
46	GO:0004806: triglyceride lipase activity	2.26E-03
47	GO:0030247: polysaccharide binding	2.26E-03
48	GO:0004427: inorganic diphosphatase activity	2.36E-03
49	GO:0003872: 6-phosphofructokinase activity	2.36E-03
50	GO:0004467: long-chain fatty acid-CoA ligase activity	2.36E-03
51	GO:0008235: metalloexopeptidase activity	2.36E-03
52	GO:0046872: metal ion binding	2.40E-03
53	GO:0003843: 1,3-beta-D-glucan synthase activity	3.12E-03
54	GO:0004713: protein tyrosine kinase activity	4.40E-03
55	GO:0004568: chitinase activity	4.40E-03
56	GO:0004177: aminopeptidase activity	4.86E-03
57	GO:0016298: lipase activity	5.65E-03
58	GO:0004672: protein kinase activity	5.76E-03
59	GO:0008061: chitin binding	6.86E-03
60	GO:0003712: transcription cofactor activity	6.86E-03
61	GO:0035251: UDP-glucosyltransferase activity	9.10E-03
62	GO:0004707: MAP kinase activity	9.10E-03
63	GO:0008810: cellulase activity	1.03E-02
64	GO:0003756: protein disulfide isomerase activity	1.09E-02
65	GO:0008514: organic anion transmembrane transporter activity	1.09E-02
66	GO:0008565: protein transporter activity	1.16E-02
67	GO:0030276: clathrin binding	1.29E-02
68	GO:0000166: nucleotide binding	1.67E-02
69	GO:0008168: methyltransferase activity	2.01E-02
70	GO:0000287: magnesium ion binding	2.05E-02
71	GO:0004721: phosphoprotein phosphatase activity	2.18E-02
72	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.18E-02
73	GO:0043531: ADP binding	2.29E-02
74	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.34E-02
75	GO:0005515: protein binding	2.62E-02
76	GO:0000149: SNARE binding	2.95E-02
77	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.95E-02
78	GO:0004871: signal transducer activity	3.24E-02
79	GO:0042803: protein homodimerization activity	3.24E-02
80	GO:0005484: SNAP receptor activity	3.32E-02
81	GO:0004722: protein serine/threonine phosphatase activity	3.39E-02
82	GO:0015293: symporter activity	3.61E-02
83	GO:0005509: calcium ion binding	3.65E-02
84	GO:0015171: amino acid transmembrane transporter activity	4.42E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.45E-13
2	GO:0016021: integral component of membrane	5.48E-08
3	GO:0030665: clathrin-coated vesicle membrane	4.13E-06
4	GO:0005887: integral component of plasma membrane	1.03E-05
5	GO:0008250: oligosaccharyltransferase complex	3.00E-05
6	GO:0031234: extrinsic component of cytoplasmic side of plasma membrane	1.52E-04
7	GO:0017119: Golgi transport complex	2.36E-04
8	GO:0070545: PeBoW complex	3.47E-04
9	GO:0031902: late endosome membrane	4.33E-04
10	GO:0009506: plasmodesma	5.06E-04
11	GO:0046861: glyoxysomal membrane	5.68E-04
12	GO:0070062: extracellular exosome	8.13E-04
13	GO:0009504: cell plate	1.25E-03
14	GO:0005794: Golgi apparatus	1.31E-03
15	GO:0005945: 6-phosphofructokinase complex	1.36E-03
16	GO:0030904: retromer complex	1.67E-03
17	GO:0030687: preribosome, large subunit precursor	2.36E-03
18	GO:0030131: clathrin adaptor complex	2.73E-03
19	GO:0000148: 1,3-beta-D-glucan synthase complex	3.12E-03
20	GO:0009514: glyoxysome	3.12E-03
21	GO:0005783: endoplasmic reticulum	4.68E-03
22	GO:0005802: trans-Golgi network	7.87E-03
23	GO:0005774: vacuolar membrane	8.58E-03
24	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.09E-02
25	GO:0000145: exocyst	1.57E-02
26	GO:0000139: Golgi membrane	1.77E-02
27	GO:0000932: P-body	1.94E-02
28	GO:0005773: vacuole	1.95E-02
29	GO:0005788: endoplasmic reticulum lumen	2.02E-02
30	GO:0005789: endoplasmic reticulum membrane	2.12E-02
31	GO:0031201: SNARE complex	3.14E-02
32	GO:0090406: pollen tube	3.32E-02
33	GO:0016020: membrane	3.35E-02
34	GO:0005768: endosome	3.54E-02