Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G24090

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation0.00E+00
2GO:0044794: positive regulation by host of viral process0.00E+00
3GO:0070212: protein poly-ADP-ribosylation0.00E+00
4GO:0045792: negative regulation of cell size0.00E+00
5GO:0006457: protein folding2.49E-20
6GO:0034976: response to endoplasmic reticulum stress2.17E-12
7GO:0055074: calcium ion homeostasis1.37E-06
8GO:0046686: response to cadmium ion6.27E-06
9GO:0006465: signal peptide processing1.04E-05
10GO:0009651: response to salt stress1.22E-05
11GO:0042742: defense response to bacterium1.41E-05
12GO:0009626: plant-type hypersensitive response2.06E-05
13GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response2.28E-05
14GO:0045454: cell redox homeostasis3.22E-05
15GO:0030968: endoplasmic reticulum unfolded protein response5.19E-05
16GO:0050691: regulation of defense response to virus by host8.09E-05
17GO:0080093: regulation of photorespiration8.09E-05
18GO:0031998: regulation of fatty acid beta-oxidation8.09E-05
19GO:0002237: response to molecule of bacterial origin1.70E-04
20GO:0031204: posttranslational protein targeting to membrane, translocation1.93E-04
21GO:0009838: abscission1.93E-04
22GO:0015031: protein transport2.00E-04
23GO:0010581: regulation of starch biosynthetic process3.24E-04
24GO:1902626: assembly of large subunit precursor of preribosome3.24E-04
25GO:0045793: positive regulation of cell size3.24E-04
26GO:0048281: inflorescence morphogenesis3.24E-04
27GO:0009553: embryo sac development3.56E-04
28GO:0009306: protein secretion3.84E-04
29GO:0009408: response to heat4.37E-04
30GO:0032877: positive regulation of DNA endoreduplication4.66E-04
31GO:0072334: UDP-galactose transmembrane transport4.66E-04
32GO:0010193: response to ozone5.92E-04
33GO:0051781: positive regulation of cell division6.21E-04
34GO:0009697: salicylic acid biosynthetic process7.86E-04
35GO:0046283: anthocyanin-containing compound metabolic process7.86E-04
36GO:0006097: glyoxylate cycle7.86E-04
37GO:0009615: response to virus8.44E-04
38GO:0009617: response to bacterium9.19E-04
39GO:0009555: pollen development1.04E-03
40GO:0006099: tricarboxylic acid cycle1.42E-03
41GO:0031540: regulation of anthocyanin biosynthetic process1.54E-03
42GO:0006102: isocitrate metabolic process1.54E-03
43GO:0010200: response to chitin1.73E-03
44GO:0051707: response to other organism1.74E-03
45GO:0010204: defense response signaling pathway, resistance gene-independent1.76E-03
46GO:0006189: 'de novo' IMP biosynthetic process1.98E-03
47GO:0015780: nucleotide-sugar transport1.98E-03
48GO:0098656: anion transmembrane transport1.98E-03
49GO:0031347: regulation of defense response2.10E-03
50GO:0010205: photoinhibition2.22E-03
51GO:0043067: regulation of programmed cell death2.22E-03
52GO:0051603: proteolysis involved in cellular protein catabolic process2.42E-03
53GO:0010224: response to UV-B2.42E-03
54GO:0009870: defense response signaling pathway, resistance gene-dependent2.46E-03
55GO:0009751: response to salicylic acid2.66E-03
56GO:0015770: sucrose transport2.71E-03
57GO:0072593: reactive oxygen species metabolic process2.71E-03
58GO:0006890: retrograde vesicle-mediated transport, Golgi to ER2.97E-03
59GO:0006820: anion transport2.97E-03
60GO:0006979: response to oxidative stress3.06E-03
61GO:0006108: malate metabolic process3.24E-03
62GO:0010075: regulation of meristem growth3.24E-03
63GO:0009934: regulation of meristem structural organization3.52E-03
64GO:0048467: gynoecium development3.52E-03
65GO:0034605: cellular response to heat3.52E-03
66GO:0000027: ribosomal large subunit assembly4.40E-03
67GO:0009863: salicylic acid mediated signaling pathway4.40E-03
68GO:0009695: jasmonic acid biosynthetic process4.70E-03
69GO:0035428: hexose transmembrane transport5.34E-03
70GO:0030433: ubiquitin-dependent ERAD pathway5.34E-03
71GO:0031348: negative regulation of defense response5.34E-03
72GO:0009411: response to UV5.67E-03
73GO:0000413: protein peptidyl-prolyl isomerization6.70E-03
74GO:0010197: polar nucleus fusion7.06E-03
75GO:0048868: pollen tube development7.06E-03
76GO:0046323: glucose import7.06E-03
77GO:0015986: ATP synthesis coupled proton transport7.42E-03
78GO:0006891: intra-Golgi vesicle-mediated transport8.17E-03
79GO:0016032: viral process8.56E-03
80GO:0042254: ribosome biogenesis8.96E-03
81GO:0009567: double fertilization forming a zygote and endosperm9.34E-03
82GO:0009860: pollen tube growth9.47E-03
83GO:0000910: cytokinesis1.02E-02
84GO:0009816: defense response to bacterium, incompatible interaction1.10E-02
85GO:0006906: vesicle fusion1.14E-02
86GO:0009627: systemic acquired resistance1.14E-02
87GO:0016192: vesicle-mediated transport1.15E-02
88GO:0008219: cell death1.27E-02
89GO:0006886: intracellular protein transport1.35E-02
90GO:0010043: response to zinc ion1.41E-02
91GO:0045087: innate immune response1.51E-02
92GO:0006839: mitochondrial transport1.65E-02
93GO:0006887: exocytosis1.70E-02
94GO:0042542: response to hydrogen peroxide1.75E-02
95GO:0008643: carbohydrate transport1.91E-02
96GO:0009644: response to high light intensity1.91E-02
97GO:0009965: leaf morphogenesis1.96E-02
98GO:0006855: drug transmembrane transport2.01E-02
99GO:0006486: protein glycosylation2.23E-02
100GO:0009909: regulation of flower development2.40E-02
101GO:0048316: seed development2.57E-02
102GO:0009735: response to cytokinin2.63E-02
103GO:0009620: response to fungus2.69E-02
104GO:0009624: response to nematode2.87E-02
105GO:0018105: peptidyl-serine phosphorylation2.93E-02
106GO:0009790: embryo development3.76E-02
107GO:0006511: ubiquitin-dependent protein catabolic process3.89E-02
108GO:0010150: leaf senescence4.23E-02
109GO:0006414: translational elongation4.27E-02
110GO:0007166: cell surface receptor signaling pathway4.65E-02
RankGO TermAdjusted P value
1GO:0005212: structural constituent of eye lens0.00E+00
2GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity0.00E+00
3GO:0052873: FMN reductase (NADPH) activity0.00E+00
4GO:0008752: FMN reductase activity0.00E+00
5GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
6GO:0003756: protein disulfide isomerase activity2.02E-09
7GO:0051082: unfolded protein binding2.75E-08
8GO:0005460: UDP-glucose transmembrane transporter activity3.27E-06
9GO:0003746: translation elongation factor activity3.97E-06
10GO:0005459: UDP-galactose transmembrane transporter activity1.04E-05
11GO:0004638: phosphoribosylaminoimidazole carboxylase activity8.09E-05
12GO:0080042: ADP-glucose pyrophosphohydrolase activity8.09E-05
13GO:0080041: ADP-ribose pyrophosphohydrolase activity1.93E-04
14GO:0017110: nucleoside-diphosphatase activity1.93E-04
15GO:0008233: peptidase activity2.28E-04
16GO:0004298: threonine-type endopeptidase activity2.94E-04
17GO:0003955: NAD(P)H dehydrogenase (quinone) activity3.24E-04
18GO:0046423: allene-oxide cyclase activity3.24E-04
19GO:0000030: mannosyltransferase activity3.24E-04
20GO:0004449: isocitrate dehydrogenase (NAD+) activity4.66E-04
21GO:0005509: calcium ion binding5.59E-04
22GO:0008565: protein transporter activity6.19E-04
23GO:0010011: auxin binding6.21E-04
24GO:0005086: ARF guanyl-nucleotide exchange factor activity6.21E-04
25GO:0047631: ADP-ribose diphosphatase activity7.86E-04
26GO:0015145: monosaccharide transmembrane transporter activity7.86E-04
27GO:0016887: ATPase activity8.52E-04
28GO:0000210: NAD+ diphosphatase activity9.59E-04
29GO:0016615: malate dehydrogenase activity9.59E-04
30GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity1.09E-03
31GO:0030060: L-malate dehydrogenase activity1.14E-03
32GO:0008320: protein transmembrane transporter activity1.34E-03
33GO:0008506: sucrose:proton symporter activity1.34E-03
34GO:0015288: porin activity1.54E-03
35GO:0030246: carbohydrate binding1.62E-03
36GO:0008308: voltage-gated anion channel activity1.76E-03
37GO:0005524: ATP binding1.80E-03
38GO:0051287: NAD binding2.10E-03
39GO:0015114: phosphate ion transmembrane transporter activity3.24E-03
40GO:0008266: poly(U) RNA binding3.52E-03
41GO:0022891: substrate-specific transmembrane transporter activity5.67E-03
42GO:0046933: proton-transporting ATP synthase activity, rotational mechanism7.06E-03
43GO:0010181: FMN binding7.42E-03
44GO:0005355: glucose transmembrane transporter activity7.42E-03
45GO:0016853: isomerase activity7.42E-03
46GO:0004872: receptor activity7.79E-03
47GO:0009931: calcium-dependent protein serine/threonine kinase activity1.14E-02
48GO:0004683: calmodulin-dependent protein kinase activity1.19E-02
49GO:0015238: drug transmembrane transporter activity1.32E-02
50GO:0004222: metalloendopeptidase activity1.37E-02
51GO:0050897: cobalt ion binding1.41E-02
52GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.41E-02
53GO:0000149: SNARE binding1.60E-02
54GO:0003924: GTPase activity1.62E-02
55GO:0005484: SNAP receptor activity1.80E-02
56GO:0005198: structural molecule activity1.96E-02
57GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.01E-02
58GO:0031625: ubiquitin protein ligase binding2.40E-02
59GO:0080043: quercetin 3-O-glucosyltransferase activity2.69E-02
60GO:0080044: quercetin 7-O-glucosyltransferase activity2.69E-02
61GO:0003735: structural constituent of ribosome3.25E-02
62GO:0016758: transferase activity, transferring hexosyl groups3.30E-02
63GO:0019843: rRNA binding3.36E-02
64GO:0015144: carbohydrate transmembrane transporter activity3.82E-02
65GO:0004675: transmembrane receptor protein serine/threonine kinase activity4.02E-02
66GO:0015297: antiporter activity4.09E-02
67GO:0005351: sugar:proton symporter activity4.16E-02
68GO:0005516: calmodulin binding4.30E-02
69GO:0008194: UDP-glycosyltransferase activity4.58E-02
70GO:0005525: GTP binding4.70E-02
RankGO TermAdjusted P value
1GO:0031205: endoplasmic reticulum Sec complex0.00E+00
2GO:0000327: lytic vacuole within protein storage vacuole0.00E+00
3GO:0005784: Sec61 translocon complex0.00E+00
4GO:0005788: endoplasmic reticulum lumen8.75E-28
5GO:0005783: endoplasmic reticulum3.76E-19
6GO:0009507: chloroplast5.18E-10
7GO:0005774: vacuolar membrane1.28E-09
8GO:0005886: plasma membrane6.01E-09
9GO:0005773: vacuole1.57E-07
10GO:0031090: organelle membrane6.45E-05
11GO:0005787: signal peptidase complex8.09E-05
12GO:0030134: ER to Golgi transport vesicle1.93E-04
13GO:0030176: integral component of endoplasmic reticulum membrane1.93E-04
14GO:0009505: plant-type cell wall1.93E-04
15GO:0000502: proteasome complex2.32E-04
16GO:0005741: mitochondrial outer membrane2.94E-04
17GO:0005839: proteasome core complex2.94E-04
18GO:0005739: mitochondrion3.97E-04
19GO:0005618: cell wall5.50E-04
20GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)6.21E-04
21GO:0016592: mediator complex6.32E-04
22GO:0009506: plasmodesma8.84E-04
23GO:0016020: membrane9.59E-04
24GO:0005801: cis-Golgi network1.14E-03
25GO:0030173: integral component of Golgi membrane1.14E-03
26GO:0005789: endoplasmic reticulum membrane1.34E-03
27GO:0048046: apoplast1.70E-03
28GO:0000326: protein storage vacuole1.76E-03
29GO:0046930: pore complex1.76E-03
30GO:0005740: mitochondrial envelope2.46E-03
31GO:0005747: mitochondrial respiratory chain complex I2.84E-03
32GO:0031012: extracellular matrix3.24E-03
33GO:0005753: mitochondrial proton-transporting ATP synthase complex3.81E-03
34GO:0005795: Golgi stack3.81E-03
35GO:0022625: cytosolic large ribosomal subunit1.15E-02
36GO:0000151: ubiquitin ligase complex1.27E-02
37GO:0005840: ribosome1.45E-02
38GO:0031201: SNARE complex1.70E-02
39GO:0016021: integral component of membrane3.26E-02
40GO:0005794: Golgi apparatus3.68E-02
41GO:0031225: anchored component of membrane4.46E-02
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Gene type



Gene DE type