GO Enrichment Analysis of Co-expressed Genes with
AT3G23880
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene | 0.00E+00 |
| 2 | GO:0090393: sepal giant cell development | 0.00E+00 |
| 3 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 4 | GO:0015822: ornithine transport | 0.00E+00 |
| 5 | GO:0009902: chloroplast relocation | 3.69E-06 |
| 6 | GO:0016559: peroxisome fission | 2.51E-05 |
| 7 | GO:1902265: abscisic acid homeostasis | 5.94E-05 |
| 8 | GO:0071370: cellular response to gibberellin stimulus | 5.94E-05 |
| 9 | GO:0000066: mitochondrial ornithine transport | 5.94E-05 |
| 10 | GO:0009767: photosynthetic electron transport chain | 9.56E-05 |
| 11 | GO:0007031: peroxisome organization | 1.25E-04 |
| 12 | GO:0007154: cell communication | 1.44E-04 |
| 13 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.44E-04 |
| 14 | GO:0080092: regulation of pollen tube growth | 2.14E-04 |
| 15 | GO:0006000: fructose metabolic process | 2.46E-04 |
| 16 | GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway | 2.46E-04 |
| 17 | GO:0044375: regulation of peroxisome size | 2.46E-04 |
| 18 | GO:0031022: nuclear migration along microfilament | 2.46E-04 |
| 19 | GO:0006520: cellular amino acid metabolic process | 3.24E-04 |
| 20 | GO:0032877: positive regulation of DNA endoreduplication | 3.57E-04 |
| 21 | GO:0016120: carotene biosynthetic process | 6.05E-04 |
| 22 | GO:0010236: plastoquinone biosynthetic process | 6.05E-04 |
| 23 | GO:1902183: regulation of shoot apical meristem development | 6.05E-04 |
| 24 | GO:0006810: transport | 6.13E-04 |
| 25 | GO:0006559: L-phenylalanine catabolic process | 7.40E-04 |
| 26 | GO:0050665: hydrogen peroxide biosynthetic process | 7.40E-04 |
| 27 | GO:0009903: chloroplast avoidance movement | 8.82E-04 |
| 28 | GO:0009854: oxidative photosynthetic carbon pathway | 8.82E-04 |
| 29 | GO:0010555: response to mannitol | 8.82E-04 |
| 30 | GO:2000067: regulation of root morphogenesis | 8.82E-04 |
| 31 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 1.18E-03 |
| 32 | GO:0052543: callose deposition in cell wall | 1.18E-03 |
| 33 | GO:0048564: photosystem I assembly | 1.18E-03 |
| 34 | GO:0007186: G-protein coupled receptor signaling pathway | 1.35E-03 |
| 35 | GO:0048193: Golgi vesicle transport | 1.35E-03 |
| 36 | GO:0010100: negative regulation of photomorphogenesis | 1.35E-03 |
| 37 | GO:0006002: fructose 6-phosphate metabolic process | 1.35E-03 |
| 38 | GO:2000024: regulation of leaf development | 1.52E-03 |
| 39 | GO:0000902: cell morphogenesis | 1.52E-03 |
| 40 | GO:0010192: mucilage biosynthetic process | 1.88E-03 |
| 41 | GO:0009773: photosynthetic electron transport in photosystem I | 2.07E-03 |
| 42 | GO:0019684: photosynthesis, light reaction | 2.07E-03 |
| 43 | GO:0009750: response to fructose | 2.07E-03 |
| 44 | GO:0030048: actin filament-based movement | 2.47E-03 |
| 45 | GO:0006094: gluconeogenesis | 2.47E-03 |
| 46 | GO:0005986: sucrose biosynthetic process | 2.47E-03 |
| 47 | GO:0019253: reductive pentose-phosphate cycle | 2.68E-03 |
| 48 | GO:0005985: sucrose metabolic process | 2.89E-03 |
| 49 | GO:0042343: indole glucosinolate metabolic process | 2.89E-03 |
| 50 | GO:0009833: plant-type primary cell wall biogenesis | 3.11E-03 |
| 51 | GO:0009944: polarity specification of adaxial/abaxial axis | 3.34E-03 |
| 52 | GO:0098542: defense response to other organism | 3.81E-03 |
| 53 | GO:0016226: iron-sulfur cluster assembly | 4.05E-03 |
| 54 | GO:0016117: carotenoid biosynthetic process | 4.81E-03 |
| 55 | GO:0080022: primary root development | 5.07E-03 |
| 56 | GO:0007059: chromosome segregation | 5.61E-03 |
| 57 | GO:0009749: response to glucose | 5.89E-03 |
| 58 | GO:0019252: starch biosynthetic process | 5.89E-03 |
| 59 | GO:0010583: response to cyclopentenone | 6.46E-03 |
| 60 | GO:0007264: small GTPase mediated signal transduction | 6.46E-03 |
| 61 | GO:0051607: defense response to virus | 7.65E-03 |
| 62 | GO:0042742: defense response to bacterium | 8.15E-03 |
| 63 | GO:0010029: regulation of seed germination | 8.28E-03 |
| 64 | GO:0045454: cell redox homeostasis | 8.70E-03 |
| 65 | GO:0009817: defense response to fungus, incompatible interaction | 9.59E-03 |
| 66 | GO:0048481: plant ovule development | 9.59E-03 |
| 67 | GO:0030244: cellulose biosynthetic process | 9.59E-03 |
| 68 | GO:0009832: plant-type cell wall biogenesis | 9.93E-03 |
| 69 | GO:0009407: toxin catabolic process | 1.03E-02 |
| 70 | GO:0009751: response to salicylic acid | 1.06E-02 |
| 71 | GO:0016051: carbohydrate biosynthetic process | 1.13E-02 |
| 72 | GO:0009637: response to blue light | 1.13E-02 |
| 73 | GO:0009853: photorespiration | 1.13E-02 |
| 74 | GO:0009753: response to jasmonic acid | 1.15E-02 |
| 75 | GO:0006839: mitochondrial transport | 1.24E-02 |
| 76 | GO:0009744: response to sucrose | 1.35E-02 |
| 77 | GO:0005975: carbohydrate metabolic process | 1.39E-02 |
| 78 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 1.42E-02 |
| 79 | GO:0009636: response to toxic substance | 1.47E-02 |
| 80 | GO:0009738: abscisic acid-activated signaling pathway | 1.85E-02 |
| 81 | GO:0048316: seed development | 1.93E-02 |
| 82 | GO:0009620: response to fungus | 2.01E-02 |
| 83 | GO:0009742: brassinosteroid mediated signaling pathway | 2.24E-02 |
| 84 | GO:0040008: regulation of growth | 3.07E-02 |
| 85 | GO:0009739: response to gibberellin | 3.44E-02 |
| 86 | GO:0009617: response to bacterium | 3.60E-02 |
| 87 | GO:0071555: cell wall organization | 3.86E-02 |
| 88 | GO:0030154: cell differentiation | 4.20E-02 |
| 89 | GO:0009658: chloroplast organization | 4.33E-02 |
| 90 | GO:0006970: response to osmotic stress | 4.56E-02 |
| 91 | GO:0009860: pollen tube growth | 4.56E-02 |
| 92 | GO:0007049: cell cycle | 4.68E-02 |
| 93 | GO:0009723: response to ethylene | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity | 0.00E+00 |
| 2 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 3 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 4 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 5 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 6 | GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity | 0.00E+00 |
| 7 | GO:1990055: phenylacetaldehyde synthase activity | 0.00E+00 |
| 8 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 9 | GO:0016719: carotene 7,8-desaturase activity | 0.00E+00 |
| 10 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.38E-05 |
| 11 | GO:0004837: tyrosine decarboxylase activity | 5.94E-05 |
| 12 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 7.05E-05 |
| 13 | GO:0000064: L-ornithine transmembrane transporter activity | 1.44E-04 |
| 14 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.44E-04 |
| 15 | GO:0032947: protein complex scaffold | 2.46E-04 |
| 16 | GO:0004148: dihydrolipoyl dehydrogenase activity | 2.46E-04 |
| 17 | GO:0031683: G-protein beta/gamma-subunit complex binding | 2.46E-04 |
| 18 | GO:0001664: G-protein coupled receptor binding | 2.46E-04 |
| 19 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 3.57E-04 |
| 20 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 3.57E-04 |
| 21 | GO:0001872: (1->3)-beta-D-glucan binding | 3.57E-04 |
| 22 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 3.57E-04 |
| 23 | GO:0008891: glycolate oxidase activity | 4.78E-04 |
| 24 | GO:0008453: alanine-glyoxylate transaminase activity | 4.78E-04 |
| 25 | GO:0030247: polysaccharide binding | 6.71E-04 |
| 26 | GO:0042578: phosphoric ester hydrolase activity | 7.40E-04 |
| 27 | GO:0080030: methyl indole-3-acetate esterase activity | 7.40E-04 |
| 28 | GO:0043295: glutathione binding | 1.03E-03 |
| 29 | GO:0004564: beta-fructofuranosidase activity | 1.18E-03 |
| 30 | GO:0005198: structural molecule activity | 1.32E-03 |
| 31 | GO:0004575: sucrose alpha-glucosidase activity | 1.69E-03 |
| 32 | GO:0004860: protein kinase inhibitor activity | 2.07E-03 |
| 33 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 2.68E-03 |
| 34 | GO:0051536: iron-sulfur cluster binding | 3.34E-03 |
| 35 | GO:0016760: cellulose synthase (UDP-forming) activity | 4.30E-03 |
| 36 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 4.73E-03 |
| 37 | GO:0042802: identical protein binding | 4.82E-03 |
| 38 | GO:0010181: FMN binding | 5.61E-03 |
| 39 | GO:0016759: cellulose synthase activity | 7.05E-03 |
| 40 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 8.70E-03 |
| 41 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 9.69E-03 |
| 42 | GO:0050897: cobalt ion binding | 1.06E-02 |
| 43 | GO:0004364: glutathione transferase activity | 1.32E-02 |
| 44 | GO:0022857: transmembrane transporter activity | 2.06E-02 |
| 45 | GO:0016787: hydrolase activity | 2.14E-02 |
| 46 | GO:0015035: protein disulfide oxidoreductase activity | 2.19E-02 |
| 47 | GO:0016758: transferase activity, transferring hexosyl groups | 2.47E-02 |
| 48 | GO:0030170: pyridoxal phosphate binding | 2.72E-02 |
| 49 | GO:0005525: GTP binding | 3.14E-02 |
| 50 | GO:0008194: UDP-glycosyltransferase activity | 3.44E-02 |
| 51 | GO:0005509: calcium ion binding | 3.57E-02 |
| 52 | GO:0005506: iron ion binding | 3.80E-02 |
| 53 | GO:0044212: transcription regulatory region DNA binding | 3.86E-02 |
| 54 | GO:0046982: protein heterodimerization activity | 4.27E-02 |
| 55 | GO:0016788: hydrolase activity, acting on ester bonds | 4.38E-02 |
| 56 | GO:0050660: flavin adenine dinucleotide binding | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009344: nitrite reductase complex [NAD(P)H] | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 2.68E-08 |
| 3 | GO:0005779: integral component of peroxisomal membrane | 3.22E-05 |
| 4 | GO:0030095: chloroplast photosystem II | 1.10E-04 |
| 5 | GO:0009654: photosystem II oxygen evolving complex | 1.75E-04 |
| 6 | GO:0009509: chromoplast | 2.46E-04 |
| 7 | GO:0005775: vacuolar lumen | 3.57E-04 |
| 8 | GO:0019898: extrinsic component of membrane | 3.73E-04 |
| 9 | GO:0005778: peroxisomal membrane | 5.12E-04 |
| 10 | GO:0046658: anchored component of plasma membrane | 6.32E-04 |
| 11 | GO:0005777: peroxisome | 6.94E-04 |
| 12 | GO:0031902: late endosome membrane | 1.09E-03 |
| 13 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.52E-03 |
| 14 | GO:0016324: apical plasma membrane | 1.88E-03 |
| 15 | GO:0005765: lysosomal membrane | 2.07E-03 |
| 16 | GO:0009505: plant-type cell wall | 2.28E-03 |
| 17 | GO:0009570: chloroplast stroma | 2.39E-03 |
| 18 | GO:0009543: chloroplast thylakoid lumen | 2.77E-03 |
| 19 | GO:0005623: cell | 2.84E-03 |
| 20 | GO:0009534: chloroplast thylakoid | 4.23E-03 |
| 21 | GO:0031225: anchored component of membrane | 5.85E-03 |
| 22 | GO:0009707: chloroplast outer membrane | 9.59E-03 |
| 23 | GO:0000325: plant-type vacuole | 1.06E-02 |
| 24 | GO:0048046: apoplast | 1.15E-02 |
| 25 | GO:0005819: spindle | 1.20E-02 |
| 26 | GO:0005747: mitochondrial respiratory chain complex I | 1.93E-02 |
| 27 | GO:0005834: heterotrimeric G-protein complex | 1.97E-02 |
| 28 | GO:0009535: chloroplast thylakoid membrane | 2.26E-02 |
| 29 | GO:0005759: mitochondrial matrix | 2.97E-02 |
| 30 | GO:0005886: plasma membrane | 4.41E-02 |