GO Enrichment Analysis of Co-expressed Genes with
AT3G23620
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090069: regulation of ribosome biogenesis | 0.00E+00 |
| 2 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.31E-08 |
| 3 | GO:0006364: rRNA processing | 1.06E-05 |
| 4 | GO:2000232: regulation of rRNA processing | 1.67E-05 |
| 5 | GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine | 1.67E-05 |
| 6 | GO:0000027: ribosomal large subunit assembly | 2.53E-05 |
| 7 | GO:0010155: regulation of proton transport | 4.35E-05 |
| 8 | GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | 4.35E-05 |
| 9 | GO:0007276: gamete generation | 1.17E-04 |
| 10 | GO:0009855: determination of bilateral symmetry | 1.17E-04 |
| 11 | GO:0042273: ribosomal large subunit biogenesis | 1.61E-04 |
| 12 | GO:0000460: maturation of 5.8S rRNA | 1.61E-04 |
| 13 | GO:0046345: abscisic acid catabolic process | 1.61E-04 |
| 14 | GO:0000470: maturation of LSU-rRNA | 2.59E-04 |
| 15 | GO:0080186: developmental vegetative growth | 3.66E-04 |
| 16 | GO:0010162: seed dormancy process | 6.68E-04 |
| 17 | GO:0010582: floral meristem determinacy | 8.01E-04 |
| 18 | GO:0034976: response to endoplasmic reticulum stress | 1.08E-03 |
| 19 | GO:0030150: protein import into mitochondrial matrix | 1.16E-03 |
| 20 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.16E-03 |
| 21 | GO:0051302: regulation of cell division | 1.23E-03 |
| 22 | GO:0009294: DNA mediated transformation | 1.47E-03 |
| 23 | GO:0042147: retrograde transport, endosome to Golgi | 1.64E-03 |
| 24 | GO:0009960: endosperm development | 1.82E-03 |
| 25 | GO:0010197: polar nucleus fusion | 1.82E-03 |
| 26 | GO:0032259: methylation | 2.09E-03 |
| 27 | GO:0009793: embryo development ending in seed dormancy | 3.02E-03 |
| 28 | GO:0000154: rRNA modification | 4.83E-03 |
| 29 | GO:0009553: embryo sac development | 6.84E-03 |
| 30 | GO:0015031: protein transport | 9.83E-03 |
| 31 | GO:0010228: vegetative to reproductive phase transition of meristem | 1.06E-02 |
| 32 | GO:0042254: ribosome biogenesis | 1.41E-02 |
| 33 | GO:0010200: response to chitin | 1.66E-02 |
| 34 | GO:0045454: cell redox homeostasis | 1.84E-02 |
| 35 | GO:0045892: negative regulation of transcription, DNA-templated | 1.86E-02 |
| 36 | GO:0006886: intracellular protein transport | 1.88E-02 |
| 37 | GO:0006457: protein folding | 3.87E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004164: diphthine synthase activity | 0.00E+00 |
| 2 | GO:0000166: nucleotide binding | 1.35E-06 |
| 3 | GO:0042134: rRNA primary transcript binding | 1.67E-05 |
| 4 | GO:0035241: protein-arginine omega-N monomethyltransferase activity | 4.35E-05 |
| 5 | GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity | 4.35E-05 |
| 6 | GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity | 4.35E-05 |
| 7 | GO:0043021: ribonucleoprotein complex binding | 4.35E-05 |
| 8 | GO:0008469: histone-arginine N-methyltransferase activity | 7.77E-05 |
| 9 | GO:0008168: methyltransferase activity | 8.30E-05 |
| 10 | GO:0030515: snoRNA binding | 3.66E-04 |
| 11 | GO:0001054: RNA polymerase I activity | 7.34E-04 |
| 12 | GO:0004407: histone deacetylase activity | 1.16E-03 |
| 13 | GO:0003756: protein disulfide isomerase activity | 1.56E-03 |
| 14 | GO:0003713: transcription coactivator activity | 1.82E-03 |
| 15 | GO:0004721: phosphoprotein phosphatase activity | 2.99E-03 |
| 16 | GO:0003723: RNA binding | 3.04E-03 |
| 17 | GO:0003746: translation elongation factor activity | 3.76E-03 |
| 18 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 5.48E-03 |
| 19 | GO:0005525: GTP binding | 6.28E-03 |
| 20 | GO:0008026: ATP-dependent helicase activity | 7.28E-03 |
| 21 | GO:0008565: protein transporter activity | 9.26E-03 |
| 22 | GO:0003729: mRNA binding | 1.15E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034455: t-UTP complex | 0.00E+00 |
| 2 | GO:0005730: nucleolus | 2.22E-09 |
| 3 | GO:0070545: PeBoW complex | 2.31E-08 |
| 4 | GO:0030687: preribosome, large subunit precursor | 2.45E-06 |
| 5 | GO:0031428: box C/D snoRNP complex | 2.59E-04 |
| 6 | GO:0030904: retromer complex | 2.59E-04 |
| 7 | GO:0005736: DNA-directed RNA polymerase I complex | 5.42E-04 |
| 8 | GO:0032040: small-subunit processome | 8.01E-04 |
| 9 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.33E-03 |
| 10 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 1.56E-03 |
| 11 | GO:0005788: endoplasmic reticulum lumen | 2.78E-03 |
| 12 | GO:0031902: late endosome membrane | 4.23E-03 |
| 13 | GO:0005634: nucleus | 5.89E-03 |
| 14 | GO:0005834: heterotrimeric G-protein complex | 6.42E-03 |
| 15 | GO:0005622: intracellular | 6.78E-03 |
| 16 | GO:0005654: nucleoplasm | 8.02E-03 |
| 17 | GO:0005623: cell | 8.32E-03 |
| 18 | GO:0005759: mitochondrial matrix | 9.58E-03 |
| 19 | GO:0022625: cytosolic large ribosomal subunit | 1.68E-02 |
| 20 | GO:0005743: mitochondrial inner membrane | 2.03E-02 |
| 21 | GO:0005829: cytosol | 2.10E-02 |
| 22 | GO:0005774: vacuolar membrane | 2.69E-02 |
| 23 | GO:0005618: cell wall | 3.08E-02 |
| 24 | GO:0005802: trans-Golgi network | 4.51E-02 |
| 25 | GO:0005768: endosome | 4.94E-02 |