GO Enrichment Analysis of Co-expressed Genes with
AT3G23070
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019284: L-methionine salvage from S-adenosylmethionine | 0.00E+00 |
| 2 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 3 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 4 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 5 | GO:2001294: malonyl-CoA catabolic process | 0.00E+00 |
| 6 | GO:0010025: wax biosynthetic process | 4.25E-06 |
| 7 | GO:0010021: amylopectin biosynthetic process | 5.57E-06 |
| 8 | GO:0048564: photosystem I assembly | 3.68E-05 |
| 9 | GO:0071482: cellular response to light stimulus | 4.70E-05 |
| 10 | GO:0033481: galacturonate biosynthetic process | 7.58E-05 |
| 11 | GO:0065002: intracellular protein transmembrane transport | 7.58E-05 |
| 12 | GO:0043953: protein transport by the Tat complex | 7.58E-05 |
| 13 | GO:0006352: DNA-templated transcription, initiation | 1.01E-04 |
| 14 | GO:1904143: positive regulation of carotenoid biosynthetic process | 1.81E-04 |
| 15 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.81E-04 |
| 16 | GO:0051604: protein maturation | 3.05E-04 |
| 17 | GO:0006753: nucleoside phosphate metabolic process | 3.05E-04 |
| 18 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 3.05E-04 |
| 19 | GO:2001141: regulation of RNA biosynthetic process | 4.41E-04 |
| 20 | GO:0051016: barbed-end actin filament capping | 4.41E-04 |
| 21 | GO:0019252: starch biosynthetic process | 5.10E-04 |
| 22 | GO:0071483: cellular response to blue light | 5.87E-04 |
| 23 | GO:0015994: chlorophyll metabolic process | 5.87E-04 |
| 24 | GO:0009451: RNA modification | 6.82E-04 |
| 25 | GO:0045038: protein import into chloroplast thylakoid membrane | 7.44E-04 |
| 26 | GO:0006461: protein complex assembly | 7.44E-04 |
| 27 | GO:0032957: inositol trisphosphate metabolic process | 7.44E-04 |
| 28 | GO:0010027: thylakoid membrane organization | 7.77E-04 |
| 29 | GO:0010190: cytochrome b6f complex assembly | 9.07E-04 |
| 30 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 9.07E-04 |
| 31 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 9.07E-04 |
| 32 | GO:0042549: photosystem II stabilization | 9.07E-04 |
| 33 | GO:0015995: chlorophyll biosynthetic process | 9.08E-04 |
| 34 | GO:0019509: L-methionine salvage from methylthioadenosine | 1.08E-03 |
| 35 | GO:1901259: chloroplast rRNA processing | 1.08E-03 |
| 36 | GO:0015937: coenzyme A biosynthetic process | 1.26E-03 |
| 37 | GO:0051693: actin filament capping | 1.26E-03 |
| 38 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 1.26E-03 |
| 39 | GO:0050829: defense response to Gram-negative bacterium | 1.26E-03 |
| 40 | GO:0045292: mRNA cis splicing, via spliceosome | 1.46E-03 |
| 41 | GO:0005978: glycogen biosynthetic process | 1.46E-03 |
| 42 | GO:0009657: plastid organization | 1.66E-03 |
| 43 | GO:0015979: photosynthesis | 1.75E-03 |
| 44 | GO:0000373: Group II intron splicing | 1.87E-03 |
| 45 | GO:0010206: photosystem II repair | 1.87E-03 |
| 46 | GO:0005982: starch metabolic process | 2.09E-03 |
| 47 | GO:0010205: photoinhibition | 2.09E-03 |
| 48 | GO:0042761: very long-chain fatty acid biosynthetic process | 2.09E-03 |
| 49 | GO:0000038: very long-chain fatty acid metabolic process | 2.56E-03 |
| 50 | GO:0009773: photosynthetic electron transport in photosystem I | 2.56E-03 |
| 51 | GO:0005983: starch catabolic process | 2.80E-03 |
| 52 | GO:0010628: positive regulation of gene expression | 3.06E-03 |
| 53 | GO:0030036: actin cytoskeleton organization | 3.06E-03 |
| 54 | GO:0007015: actin filament organization | 3.32E-03 |
| 55 | GO:0010143: cutin biosynthetic process | 3.32E-03 |
| 56 | GO:0010207: photosystem II assembly | 3.32E-03 |
| 57 | GO:0090351: seedling development | 3.59E-03 |
| 58 | GO:0009225: nucleotide-sugar metabolic process | 3.59E-03 |
| 59 | GO:0009735: response to cytokinin | 4.47E-03 |
| 60 | GO:0009269: response to desiccation | 4.73E-03 |
| 61 | GO:0009416: response to light stimulus | 5.00E-03 |
| 62 | GO:0035428: hexose transmembrane transport | 5.03E-03 |
| 63 | GO:0016226: iron-sulfur cluster assembly | 5.03E-03 |
| 64 | GO:0042335: cuticle development | 6.31E-03 |
| 65 | GO:0046323: glucose import | 6.64E-03 |
| 66 | GO:0009741: response to brassinosteroid | 6.64E-03 |
| 67 | GO:0006814: sodium ion transport | 6.99E-03 |
| 68 | GO:0009646: response to absence of light | 6.99E-03 |
| 69 | GO:0008654: phospholipid biosynthetic process | 7.34E-03 |
| 70 | GO:0032502: developmental process | 8.05E-03 |
| 71 | GO:0009658: chloroplast organization | 8.06E-03 |
| 72 | GO:0030163: protein catabolic process | 8.42E-03 |
| 73 | GO:0009567: double fertilization forming a zygote and endosperm | 8.79E-03 |
| 74 | GO:0006869: lipid transport | 1.32E-02 |
| 75 | GO:0009637: response to blue light | 1.42E-02 |
| 76 | GO:0006631: fatty acid metabolic process | 1.60E-02 |
| 77 | GO:0009651: response to salt stress | 1.65E-02 |
| 78 | GO:0010114: response to red light | 1.70E-02 |
| 79 | GO:0006855: drug transmembrane transport | 1.89E-02 |
| 80 | GO:0009809: lignin biosynthetic process | 2.10E-02 |
| 81 | GO:0006364: rRNA processing | 2.10E-02 |
| 82 | GO:0006096: glycolytic process | 2.36E-02 |
| 83 | GO:0009626: plant-type hypersensitive response | 2.47E-02 |
| 84 | GO:0009611: response to wounding | 2.69E-02 |
| 85 | GO:0009742: brassinosteroid mediated signaling pathway | 2.81E-02 |
| 86 | GO:0042744: hydrogen peroxide catabolic process | 3.47E-02 |
| 87 | GO:0055114: oxidation-reduction process | 3.61E-02 |
| 88 | GO:0006633: fatty acid biosynthetic process | 3.72E-02 |
| 89 | GO:0016310: phosphorylation | 3.78E-02 |
| 90 | GO:0006470: protein dephosphorylation | 4.37E-02 |
| 91 | GO:0008380: RNA splicing | 4.51E-02 |
| 92 | GO:0009617: response to bacterium | 4.51E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046570: methylthioribulose 1-phosphate dehydratase activity | 0.00E+00 |
| 2 | GO:0043874: acireductone synthase activity | 0.00E+00 |
| 3 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 4 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 5 | GO:0005048: signal sequence binding | 0.00E+00 |
| 6 | GO:0001053: plastid sigma factor activity | 5.57E-06 |
| 7 | GO:0016987: sigma factor activity | 5.57E-06 |
| 8 | GO:0019203: carbohydrate phosphatase activity | 7.58E-05 |
| 9 | GO:0050308: sugar-phosphatase activity | 7.58E-05 |
| 10 | GO:0010945: CoA pyrophosphatase activity | 7.58E-05 |
| 11 | GO:0047746: chlorophyllase activity | 1.81E-04 |
| 12 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 1.81E-04 |
| 13 | GO:0033201: alpha-1,4-glucan synthase activity | 1.81E-04 |
| 14 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 1.81E-04 |
| 15 | GO:0016630: protochlorophyllide reductase activity | 1.81E-04 |
| 16 | GO:0047325: inositol tetrakisphosphate 1-kinase activity | 3.05E-04 |
| 17 | GO:0070330: aromatase activity | 3.05E-04 |
| 18 | GO:0043169: cation binding | 3.05E-04 |
| 19 | GO:0004373: glycogen (starch) synthase activity | 3.05E-04 |
| 20 | GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity | 3.05E-04 |
| 21 | GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity | 4.41E-04 |
| 22 | GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity | 4.41E-04 |
| 23 | GO:0008508: bile acid:sodium symporter activity | 4.41E-04 |
| 24 | GO:0016787: hydrolase activity | 5.00E-04 |
| 25 | GO:0050378: UDP-glucuronate 4-epimerase activity | 5.87E-04 |
| 26 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 5.87E-04 |
| 27 | GO:0004045: aminoacyl-tRNA hydrolase activity | 5.87E-04 |
| 28 | GO:0009011: starch synthase activity | 5.87E-04 |
| 29 | GO:0018685: alkane 1-monooxygenase activity | 7.44E-04 |
| 30 | GO:0003959: NADPH dehydrogenase activity | 7.44E-04 |
| 31 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 9.07E-04 |
| 32 | GO:2001070: starch binding | 9.07E-04 |
| 33 | GO:0000210: NAD+ diphosphatase activity | 9.07E-04 |
| 34 | GO:0043022: ribosome binding | 1.46E-03 |
| 35 | GO:0008312: 7S RNA binding | 1.46E-03 |
| 36 | GO:0004033: aldo-keto reductase (NADP) activity | 1.46E-03 |
| 37 | GO:0052747: sinapyl alcohol dehydrogenase activity | 1.46E-03 |
| 38 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 1.87E-03 |
| 39 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.14E-03 |
| 40 | GO:0004519: endonuclease activity | 2.69E-03 |
| 41 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 2.80E-03 |
| 42 | GO:0004565: beta-galactosidase activity | 3.06E-03 |
| 43 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 3.86E-03 |
| 44 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 3.86E-03 |
| 45 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 3.86E-03 |
| 46 | GO:0051536: iron-sulfur cluster binding | 4.15E-03 |
| 47 | GO:0004176: ATP-dependent peptidase activity | 4.73E-03 |
| 48 | GO:0005355: glucose transmembrane transporter activity | 6.99E-03 |
| 49 | GO:0000287: magnesium ion binding | 7.91E-03 |
| 50 | GO:0016791: phosphatase activity | 8.79E-03 |
| 51 | GO:0008237: metallopeptidase activity | 9.17E-03 |
| 52 | GO:0008236: serine-type peptidase activity | 1.16E-02 |
| 53 | GO:0015238: drug transmembrane transporter activity | 1.24E-02 |
| 54 | GO:0004222: metalloendopeptidase activity | 1.28E-02 |
| 55 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.33E-02 |
| 56 | GO:0003824: catalytic activity | 1.38E-02 |
| 57 | GO:0009055: electron carrier activity | 1.59E-02 |
| 58 | GO:0045735: nutrient reservoir activity | 2.36E-02 |
| 59 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.42E-02 |
| 60 | GO:0003779: actin binding | 2.64E-02 |
| 61 | GO:0016746: transferase activity, transferring acyl groups | 2.75E-02 |
| 62 | GO:0019843: rRNA binding | 3.16E-02 |
| 63 | GO:0015144: carbohydrate transmembrane transporter activity | 3.59E-02 |
| 64 | GO:0015297: antiporter activity | 3.85E-02 |
| 65 | GO:0005351: sugar:proton symporter activity | 3.91E-02 |
| 66 | GO:0005525: GTP binding | 4.31E-02 |
| 67 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 4.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043235: receptor complex | 0.00E+00 |
| 2 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 1.39E-25 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 2.99E-12 |
| 5 | GO:0009534: chloroplast thylakoid | 6.16E-09 |
| 6 | GO:0009570: chloroplast stroma | 3.14E-08 |
| 7 | GO:0009941: chloroplast envelope | 4.97E-07 |
| 8 | GO:0009501: amyloplast | 3.68E-05 |
| 9 | GO:0031361: integral component of thylakoid membrane | 7.58E-05 |
| 10 | GO:0080085: signal recognition particle, chloroplast targeting | 1.81E-04 |
| 11 | GO:0008290: F-actin capping protein complex | 1.81E-04 |
| 12 | GO:0009579: thylakoid | 2.07E-04 |
| 13 | GO:0033281: TAT protein transport complex | 3.05E-04 |
| 14 | GO:0009526: plastid envelope | 5.87E-04 |
| 15 | GO:0055035: plastid thylakoid membrane | 7.44E-04 |
| 16 | GO:0009533: chloroplast stromal thylakoid | 1.26E-03 |
| 17 | GO:0031969: chloroplast membrane | 1.48E-03 |
| 18 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 1.66E-03 |
| 19 | GO:0043231: intracellular membrane-bounded organelle | 2.74E-03 |
| 20 | GO:0030095: chloroplast photosystem II | 3.32E-03 |
| 21 | GO:0009523: photosystem II | 7.34E-03 |
| 22 | GO:0032580: Golgi cisterna membrane | 8.79E-03 |
| 23 | GO:0005778: peroxisomal membrane | 9.17E-03 |
| 24 | GO:0030529: intracellular ribonucleoprotein complex | 9.95E-03 |
| 25 | GO:0031977: thylakoid lumen | 1.60E-02 |
| 26 | GO:0016021: integral component of membrane | 2.29E-02 |
| 27 | GO:0010287: plastoglobule | 3.04E-02 |
| 28 | GO:0009543: chloroplast thylakoid lumen | 3.16E-02 |
| 29 | GO:0005802: trans-Golgi network | 4.20E-02 |
| 30 | GO:0005768: endosome | 4.77E-02 |