co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G22845

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006182: cGMP biosynthetic process	0.00E+00
2	GO:0072722: response to amitrole	0.00E+00
3	GO:0043201: response to leucine	0.00E+00
4	GO:0080052: response to histidine	0.00E+00
5	GO:0042430: indole-containing compound metabolic process	0.00E+00
6	GO:0080053: response to phenylalanine	0.00E+00
7	GO:0045747: positive regulation of Notch signaling pathway	0.00E+00
8	GO:0006983: ER overload response	0.00E+00
9	GO:0006793: phosphorus metabolic process	0.00E+00
10	GO:0072321: chaperone-mediated protein transport	0.00E+00
11	GO:0009617: response to bacterium	4.26E-06
12	GO:0016998: cell wall macromolecule catabolic process	5.20E-06
13	GO:0071456: cellular response to hypoxia	6.37E-06
14	GO:0006032: chitin catabolic process	2.45E-05
15	GO:0006468: protein phosphorylation	2.62E-05
16	GO:0009620: response to fungus	6.10E-05
17	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.80E-04
18	GO:0080120: CAAX-box protein maturation	2.84E-04
19	GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine	2.84E-04
20	GO:0071586: CAAX-box protein processing	2.84E-04
21	GO:1990641: response to iron ion starvation	2.84E-04
22	GO:0006422: aspartyl-tRNA aminoacylation	2.84E-04
23	GO:0043687: post-translational protein modification	2.84E-04
24	GO:0046244: salicylic acid catabolic process	2.84E-04
25	GO:0006474: N-terminal protein amino acid acetylation	2.84E-04
26	GO:0009751: response to salicylic acid	3.36E-04
27	GO:0042742: defense response to bacterium	3.92E-04
28	GO:0009821: alkaloid biosynthetic process	4.15E-04
29	GO:0051865: protein autoubiquitination	4.15E-04
30	GO:0009615: response to virus	5.68E-04
31	GO:2000072: regulation of defense response to fungus, incompatible interaction	6.25E-04
32	GO:0090057: root radial pattern formation	6.25E-04
33	GO:0006101: citrate metabolic process	6.25E-04
34	GO:0043066: negative regulation of apoptotic process	6.25E-04
35	GO:0042939: tripeptide transport	6.25E-04
36	GO:0051592: response to calcium ion	6.25E-04
37	GO:0000272: polysaccharide catabolic process	6.61E-04
38	GO:0006626: protein targeting to mitochondrion	8.57E-04
39	GO:0002237: response to molecule of bacterial origin	9.62E-04
40	GO:0010272: response to silver ion	1.01E-03
41	GO:0045039: protein import into mitochondrial inner membrane	1.01E-03
42	GO:0051211: anisotropic cell growth	1.01E-03
43	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	1.01E-03
44	GO:0009062: fatty acid catabolic process	1.01E-03
45	GO:0010351: lithium ion transport	1.01E-03
46	GO:0046686: response to cadmium ion	1.15E-03
47	GO:0034976: response to endoplasmic reticulum stress	1.19E-03
48	GO:0048194: Golgi vesicle budding	1.45E-03
49	GO:0006107: oxaloacetate metabolic process	1.45E-03
50	GO:0002239: response to oomycetes	1.45E-03
51	GO:0006874: cellular calcium ion homeostasis	1.45E-03
52	GO:0006882: cellular zinc ion homeostasis	1.45E-03
53	GO:0000187: activation of MAPK activity	1.45E-03
54	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.45E-03
55	GO:0055114: oxidation-reduction process	1.92E-03
56	GO:0006221: pyrimidine nucleotide biosynthetic process	1.94E-03
57	GO:0033356: UDP-L-arabinose metabolic process	1.94E-03
58	GO:2000038: regulation of stomatal complex development	1.94E-03
59	GO:0006734: NADH metabolic process	1.94E-03
60	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	1.94E-03
61	GO:0080142: regulation of salicylic acid biosynthetic process	1.94E-03
62	GO:0042938: dipeptide transport	1.94E-03
63	GO:0006097: glyoxylate cycle	2.48E-03
64	GO:0007029: endoplasmic reticulum organization	2.48E-03
65	GO:0009697: salicylic acid biosynthetic process	2.48E-03
66	GO:0018279: protein N-linked glycosylation via asparagine	2.48E-03
67	GO:0060918: auxin transport	3.06E-03
68	GO:0047484: regulation of response to osmotic stress	3.06E-03
69	GO:1900425: negative regulation of defense response to bacterium	3.06E-03
70	GO:0002238: response to molecule of fungal origin	3.06E-03
71	GO:0010555: response to mannitol	3.68E-03
72	GO:2000037: regulation of stomatal complex patterning	3.68E-03
73	GO:2000067: regulation of root morphogenesis	3.68E-03
74	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.68E-03
75	GO:0009738: abscisic acid-activated signaling pathway	3.91E-03
76	GO:0030026: cellular manganese ion homeostasis	4.34E-03
77	GO:1902074: response to salt	4.34E-03
78	GO:0045454: cell redox homeostasis	4.59E-03
79	GO:0006102: isocitrate metabolic process	5.03E-03
80	GO:1900150: regulation of defense response to fungus	5.03E-03
81	GO:0043068: positive regulation of programmed cell death	5.03E-03
82	GO:0009699: phenylpropanoid biosynthetic process	5.77E-03
83	GO:0007186: G-protein coupled receptor signaling pathway	5.77E-03
84	GO:0010262: somatic embryogenesis	5.77E-03
85	GO:0009817: defense response to fungus, incompatible interaction	6.06E-03
86	GO:0007338: single fertilization	6.54E-03
87	GO:0010112: regulation of systemic acquired resistance	6.54E-03
88	GO:0010150: leaf senescence	6.71E-03
89	GO:0009737: response to abscisic acid	6.98E-03
90	GO:0010043: response to zinc ion	7.01E-03
91	GO:0010205: photoinhibition	7.35E-03
92	GO:0043067: regulation of programmed cell death	7.35E-03
93	GO:0030042: actin filament depolymerization	7.35E-03
94	GO:0008202: steroid metabolic process	7.35E-03
95	GO:0006099: tricarboxylic acid cycle	8.04E-03
96	GO:0055062: phosphate ion homeostasis	8.19E-03
97	GO:0007064: mitotic sister chromatid cohesion	8.19E-03
98	GO:0043069: negative regulation of programmed cell death	8.19E-03
99	GO:0000038: very long-chain fatty acid metabolic process	9.06E-03
100	GO:0009750: response to fructose	9.06E-03
101	GO:0006952: defense response	9.51E-03
102	GO:0071365: cellular response to auxin stimulus	9.96E-03
103	GO:0000266: mitochondrial fission	9.96E-03
104	GO:0012501: programmed cell death	9.96E-03
105	GO:0006108: malate metabolic process	1.09E-02
106	GO:0010229: inflorescence development	1.09E-02
107	GO:0009636: response to toxic substance	1.12E-02
108	GO:0007030: Golgi organization	1.29E-02
109	GO:0046688: response to copper ion	1.29E-02
110	GO:0009809: lignin biosynthetic process	1.34E-02
111	GO:0000162: tryptophan biosynthetic process	1.39E-02
112	GO:0000027: ribosomal large subunit assembly	1.50E-02
113	GO:0080147: root hair cell development	1.50E-02
114	GO:0009611: response to wounding	1.56E-02
115	GO:0010073: meristem maintenance	1.60E-02
116	GO:0006825: copper ion transport	1.60E-02
117	GO:0043622: cortical microtubule organization	1.60E-02
118	GO:0009626: plant-type hypersensitive response	1.69E-02
119	GO:0044550: secondary metabolite biosynthetic process	1.71E-02
120	GO:0019748: secondary metabolic process	1.83E-02
121	GO:0009814: defense response, incompatible interaction	1.83E-02
122	GO:0030433: ubiquitin-dependent ERAD pathway	1.83E-02
123	GO:0010227: floral organ abscission	1.95E-02
124	GO:0006012: galactose metabolic process	1.95E-02
125	GO:0018105: peptidyl-serine phosphorylation	1.97E-02
126	GO:0009306: protein secretion	2.07E-02
127	GO:0042391: regulation of membrane potential	2.31E-02
128	GO:0032259: methylation	2.38E-02
129	GO:0071472: cellular response to salt stress	2.44E-02
130	GO:0009958: positive gravitropism	2.44E-02
131	GO:0016310: phosphorylation	2.51E-02
132	GO:0009058: biosynthetic process	2.53E-02
133	GO:0048544: recognition of pollen	2.57E-02
134	GO:0006814: sodium ion transport	2.57E-02
135	GO:0009749: response to glucose	2.70E-02
136	GO:0009753: response to jasmonic acid	2.75E-02
137	GO:0002229: defense response to oomycetes	2.83E-02
138	GO:0000302: response to reactive oxygen species	2.83E-02
139	GO:0006635: fatty acid beta-oxidation	2.83E-02
140	GO:0016032: viral process	2.97E-02
141	GO:0040008: regulation of growth	3.16E-02
142	GO:0009567: double fertilization forming a zygote and endosperm	3.25E-02
143	GO:0050832: defense response to fungus	3.57E-02
144	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.70E-02
145	GO:0007166: cell surface receptor signaling pathway	3.78E-02
146	GO:0009816: defense response to bacterium, incompatible interaction	3.83E-02
147	GO:0009627: systemic acquired resistance	3.98E-02
148	GO:0006950: response to stress	4.13E-02
149	GO:0016049: cell growth	4.29E-02
150	GO:0006979: response to oxidative stress	4.30E-02
151	GO:0009651: response to salt stress	4.45E-02
152	GO:0030244: cellulose biosynthetic process	4.45E-02
153	GO:0009735: response to cytokinin	4.57E-02
154	GO:0009832: plant-type cell wall biogenesis	4.60E-02
155	GO:0009407: toxin catabolic process	4.76E-02
156	GO:0009826: unidimensional cell growth	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
2	GO:0004164: diphthine synthase activity	0.00E+00
3	GO:0051670: inulinase activity	0.00E+00
4	GO:0004674: protein serine/threonine kinase activity	9.11E-06
5	GO:0016301: kinase activity	1.63E-05
6	GO:0004568: chitinase activity	2.45E-05
7	GO:0004040: amidase activity	8.49E-05
8	GO:0005496: steroid binding	8.49E-05
9	GO:0004656: procollagen-proline 4-dioxygenase activity	1.69E-04
10	GO:0008809: carnitine racemase activity	2.84E-04
11	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.84E-04
12	GO:0004815: aspartate-tRNA ligase activity	2.84E-04
13	GO:0051669: fructan beta-fructosidase activity	2.84E-04
14	GO:0031219: levanase activity	2.84E-04
15	GO:0016844: strictosidine synthase activity	4.91E-04
16	GO:0003994: aconitate hydratase activity	6.25E-04
17	GO:0032934: sterol binding	6.25E-04
18	GO:0050736: O-malonyltransferase activity	6.25E-04
19	GO:0042937: tripeptide transporter activity	6.25E-04
20	GO:0004596: peptide alpha-N-acetyltransferase activity	6.25E-04
21	GO:0004103: choline kinase activity	6.25E-04
22	GO:0004566: beta-glucuronidase activity	6.25E-04
23	GO:0004683: calmodulin-dependent protein kinase activity	6.98E-04
24	GO:0005524: ATP binding	9.05E-04
25	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	9.50E-04
26	GO:0001664: G-protein coupled receptor binding	1.01E-03
27	GO:0008430: selenium binding	1.01E-03
28	GO:0016531: copper chaperone activity	1.01E-03
29	GO:0004148: dihydrolipoyl dehydrogenase activity	1.01E-03
30	GO:0031683: G-protein beta/gamma-subunit complex binding	1.01E-03
31	GO:0004383: guanylate cyclase activity	1.01E-03
32	GO:0016805: dipeptidase activity	1.01E-03
33	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.06E-03
34	GO:0004190: aspartic-type endopeptidase activity	1.07E-03
35	GO:0008061: chitin binding	1.07E-03
36	GO:0031418: L-ascorbic acid binding	1.32E-03
37	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.45E-03
38	GO:0042936: dipeptide transporter activity	1.94E-03
39	GO:0015369: calcium:proton antiporter activity	1.94E-03
40	GO:0004576: oligosaccharyl transferase activity	1.94E-03
41	GO:0015368: calcium:cation antiporter activity	1.94E-03
42	GO:0003756: protein disulfide isomerase activity	2.07E-03
43	GO:0005507: copper ion binding	2.22E-03
44	GO:0005516: calmodulin binding	2.47E-03
45	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	2.48E-03
46	GO:0047714: galactolipase activity	3.06E-03
47	GO:0004029: aldehyde dehydrogenase (NAD) activity	3.06E-03
48	GO:0016615: malate dehydrogenase activity	3.06E-03
49	GO:0050660: flavin adenine dinucleotide binding	3.14E-03
50	GO:0102391: decanoate--CoA ligase activity	3.68E-03
51	GO:0004012: phospholipid-translocating ATPase activity	3.68E-03
52	GO:0030060: L-malate dehydrogenase activity	3.68E-03
53	GO:0005509: calcium ion binding	3.79E-03
54	GO:0008235: metalloexopeptidase activity	4.34E-03
55	GO:0008121: ubiquinol-cytochrome-c reductase activity	4.34E-03
56	GO:0004467: long-chain fatty acid-CoA ligase activity	4.34E-03
57	GO:0004714: transmembrane receptor protein tyrosine kinase activity	5.03E-03
58	GO:0004034: aldose 1-epimerase activity	5.03E-03
59	GO:0052747: sinapyl alcohol dehydrogenase activity	5.03E-03
60	GO:0015491: cation:cation antiporter activity	5.03E-03
61	GO:0004708: MAP kinase kinase activity	5.03E-03
62	GO:0009931: calcium-dependent protein serine/threonine kinase activity	5.19E-03
63	GO:0030247: polysaccharide binding	5.47E-03
64	GO:0008142: oxysterol binding	5.77E-03
65	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	5.77E-03
66	GO:0009055: electron carrier activity	7.03E-03
67	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	7.35E-03
68	GO:0003746: translation elongation factor activity	7.68E-03
69	GO:0008171: O-methyltransferase activity	8.19E-03
70	GO:0004129: cytochrome-c oxidase activity	9.06E-03
71	GO:0008794: arsenate reductase (glutaredoxin) activity	9.06E-03
72	GO:0004177: aminopeptidase activity	9.06E-03
73	GO:0008559: xenobiotic-transporting ATPase activity	9.06E-03
74	GO:0004364: glutathione transferase activity	9.53E-03
75	GO:0045551: cinnamyl-alcohol dehydrogenase activity	9.96E-03
76	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.09E-02
77	GO:0004175: endopeptidase activity	1.19E-02
78	GO:0030552: cAMP binding	1.29E-02
79	GO:0030553: cGMP binding	1.29E-02
80	GO:0003712: transcription cofactor activity	1.29E-02
81	GO:0005217: intracellular ligand-gated ion channel activity	1.29E-02
82	GO:0004970: ionotropic glutamate receptor activity	1.29E-02
83	GO:0005506: iron ion binding	1.38E-02
84	GO:0003954: NADH dehydrogenase activity	1.50E-02
85	GO:0005216: ion channel activity	1.60E-02
86	GO:0004298: threonine-type endopeptidase activity	1.72E-02
87	GO:0015035: protein disulfide oxidoreductase activity	1.97E-02
88	GO:0008514: organic anion transmembrane transporter activity	2.07E-02
89	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.13E-02
90	GO:0005249: voltage-gated potassium channel activity	2.31E-02
91	GO:0030551: cyclic nucleotide binding	2.31E-02
92	GO:0008080: N-acetyltransferase activity	2.44E-02
93	GO:0016853: isomerase activity	2.57E-02
94	GO:0010181: FMN binding	2.57E-02
95	GO:0004672: protein kinase activity	2.72E-02
96	GO:0008565: protein transporter activity	2.87E-02
97	GO:0020037: heme binding	3.07E-02
98	GO:0016722: oxidoreductase activity, oxidizing metal ions	3.39E-02
99	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.39E-02
100	GO:0051213: dioxygenase activity	3.68E-02
101	GO:0008194: UDP-glycosyltransferase activity	3.70E-02
102	GO:0004806: triglyceride lipase activity	4.13E-02
103	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	4.29E-02
104	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.45E-02
105	GO:0004222: metalloendopeptidase activity	4.76E-02
106	GO:0008168: methyltransferase activity	4.90E-02
107	GO:0030145: manganese ion binding	4.93E-02
108	GO:0050897: cobalt ion binding	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0042719: mitochondrial intermembrane space protein transporter complex	0.00E+00
2	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
3	GO:0031417: NatC complex	0.00E+00
4	GO:0005783: endoplasmic reticulum	1.00E-10
5	GO:0005886: plasma membrane	8.20E-08
6	GO:0016021: integral component of membrane	4.92E-06
7	GO:0005773: vacuole	5.24E-04
8	GO:0031304: intrinsic component of mitochondrial inner membrane	6.25E-04
9	GO:0005765: lysosomal membrane	6.61E-04
10	GO:0005853: eukaryotic translation elongation factor 1 complex	1.01E-03
11	GO:0005758: mitochondrial intermembrane space	1.32E-03
12	GO:0030658: transport vesicle membrane	1.45E-03
13	GO:0030660: Golgi-associated vesicle membrane	1.94E-03
14	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	1.94E-03
15	GO:0005794: Golgi apparatus	2.34E-03
16	GO:0005746: mitochondrial respiratory chain	2.48E-03
17	GO:0008250: oligosaccharyltransferase complex	2.48E-03
18	GO:0005774: vacuolar membrane	2.89E-03
19	GO:0005789: endoplasmic reticulum membrane	3.40E-03
20	GO:0030173: integral component of Golgi membrane	3.68E-03
21	GO:0010005: cortical microtubule, transverse to long axis	3.68E-03
22	GO:0005829: cytosol	3.93E-03
23	GO:0005788: endoplasmic reticulum lumen	4.91E-03
24	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	5.03E-03
25	GO:0000326: protein storage vacuole	5.77E-03
26	GO:0031901: early endosome membrane	6.54E-03
27	GO:0031090: organelle membrane	6.54E-03
28	GO:0005876: spindle microtubule	7.35E-03
29	GO:0055028: cortical microtubule	8.19E-03
30	GO:0005802: trans-Golgi network	9.45E-03
31	GO:0009574: preprophase band	1.09E-02
32	GO:0005750: mitochondrial respiratory chain complex III	1.19E-02
33	GO:0030176: integral component of endoplasmic reticulum membrane	1.29E-02
34	GO:0005839: proteasome core complex	1.72E-02
35	GO:0015629: actin cytoskeleton	1.95E-02
36	GO:0005576: extracellular region	2.39E-02
37	GO:0009524: phragmoplast	2.53E-02
38	GO:0019898: extrinsic component of membrane	2.70E-02
39	GO:0016020: membrane	2.87E-02
40	GO:0005768: endosome	3.65E-02
41	GO:0000932: P-body	3.68E-02
42	GO:0019005: SCF ubiquitin ligase complex	4.45E-02
43	GO:0005737: cytoplasm	4.62E-02
44	GO:0000325: plant-type vacuole	4.93E-02