co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G22630

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070212: protein poly-ADP-ribosylation	0.00E+00
2	GO:0071731: response to nitric oxide	0.00E+00
3	GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation	0.00E+00
4	GO:0006042: glucosamine biosynthetic process	0.00E+00
5	GO:1901137: carbohydrate derivative biosynthetic process	0.00E+00
6	GO:0044794: positive regulation by host of viral process	0.00E+00
7	GO:0034050: host programmed cell death induced by symbiont	0.00E+00
8	GO:1900103: positive regulation of endoplasmic reticulum unfolded protein response	0.00E+00
9	GO:0006457: protein folding	2.84E-06
10	GO:0046686: response to cadmium ion	2.87E-06
11	GO:0009617: response to bacterium	1.82E-05
12	GO:0042254: ribosome biogenesis	3.16E-05
13	GO:1990258: histone glutamine methylation	4.04E-05
14	GO:0000494: box C/D snoRNA 3'-end processing	4.04E-05
15	GO:0034976: response to endoplasmic reticulum stress	8.11E-05
16	GO:0000027: ribosomal large subunit assembly	9.13E-05
17	GO:0045905: positive regulation of translational termination	1.00E-04
18	GO:0031204: posttranslational protein targeting to membrane, translocation	1.00E-04
19	GO:0071395: cellular response to jasmonic acid stimulus	1.00E-04
20	GO:0045901: positive regulation of translational elongation	1.00E-04
21	GO:0006123: mitochondrial electron transport, cytochrome c to oxygen	1.00E-04
22	GO:0009838: abscission	1.00E-04
23	GO:0006452: translational frameshifting	1.00E-04
24	GO:0007005: mitochondrion organization	1.25E-04
25	GO:0010581: regulation of starch biosynthetic process	1.73E-04
26	GO:0008652: cellular amino acid biosynthetic process	1.73E-04
27	GO:0055074: calcium ion homeostasis	1.73E-04
28	GO:1902626: assembly of large subunit precursor of preribosome	1.73E-04
29	GO:0009651: response to salt stress	2.18E-04
30	GO:0010193: response to ozone	2.42E-04
31	GO:0006465: signal peptide processing	4.37E-04
32	GO:0031167: rRNA methylation	4.37E-04
33	GO:0006412: translation	5.48E-04
34	GO:0009793: embryo development ending in seed dormancy	5.53E-04
35	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	6.40E-04
36	GO:0009423: chorismate biosynthetic process	6.40E-04
37	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	7.49E-04
38	GO:0071446: cellular response to salicylic acid stimulus	7.49E-04
39	GO:0006364: rRNA processing	9.76E-04
40	GO:0001510: RNA methylation	9.77E-04
41	GO:0030968: endoplasmic reticulum unfolded protein response	9.77E-04
42	GO:0015031: protein transport	1.08E-03
43	GO:0046916: cellular transition metal ion homeostasis	1.10E-03
44	GO:0006189: 'de novo' IMP biosynthetic process	1.10E-03
45	GO:0015780: nucleotide-sugar transport	1.10E-03
46	GO:0098656: anion transmembrane transport	1.10E-03
47	GO:0009626: plant-type hypersensitive response	1.21E-03
48	GO:0009553: embryo sac development	1.32E-03
49	GO:0009870: defense response signaling pathway, resistance gene-dependent	1.35E-03
50	GO:0009073: aromatic amino acid family biosynthetic process	1.49E-03
51	GO:0012501: programmed cell death	1.63E-03
52	GO:0006820: anion transport	1.63E-03
53	GO:0006626: protein targeting to mitochondrion	1.77E-03
54	GO:0010075: regulation of meristem growth	1.77E-03
55	GO:0048467: gynoecium development	1.92E-03
56	GO:0002237: response to molecule of bacterial origin	1.92E-03
57	GO:0009934: regulation of meristem structural organization	1.92E-03
58	GO:0006413: translational initiation	2.17E-03
59	GO:0009863: salicylic acid mediated signaling pathway	2.39E-03
60	GO:0006825: copper ion transport	2.55E-03
61	GO:0009814: defense response, incompatible interaction	2.89E-03
62	GO:0009411: response to UV	3.06E-03
63	GO:0009306: protein secretion	3.24E-03
64	GO:0070417: cellular response to cold	3.42E-03
65	GO:0008033: tRNA processing	3.61E-03
66	GO:0000413: protein peptidyl-prolyl isomerization	3.61E-03
67	GO:0048868: pollen tube development	3.80E-03
68	GO:0042742: defense response to bacterium	4.30E-03
69	GO:0006979: response to oxidative stress	4.35E-03
70	GO:0010200: response to chitin	4.57E-03
71	GO:0016032: viral process	4.58E-03
72	GO:0009567: double fertilization forming a zygote and endosperm	5.00E-03
73	GO:0001666: response to hypoxia	5.64E-03
74	GO:0009816: defense response to bacterium, incompatible interaction	5.86E-03
75	GO:0006906: vesicle fusion	6.09E-03
76	GO:0006888: ER to Golgi vesicle-mediated transport	6.31E-03
77	GO:0016049: cell growth	6.54E-03
78	GO:0008219: cell death	6.77E-03
79	GO:0048364: root development	6.78E-03
80	GO:0048527: lateral root development	7.49E-03
81	GO:0009853: photorespiration	7.99E-03
82	GO:0030001: metal ion transport	8.75E-03
83	GO:0006887: exocytosis	9.01E-03
84	GO:0042542: response to hydrogen peroxide	9.27E-03
85	GO:0008283: cell proliferation	9.53E-03
86	GO:0031347: regulation of defense response	1.09E-02
87	GO:0009555: pollen development	1.16E-02
88	GO:0006486: protein glycosylation	1.18E-02
89	GO:0009611: response to wounding	1.18E-02
90	GO:0051603: proteolysis involved in cellular protein catabolic process	1.20E-02
91	GO:0048367: shoot system development	1.35E-02
92	GO:0010150: leaf senescence	2.22E-02
93	GO:0007166: cell surface receptor signaling pathway	2.45E-02
94	GO:0009860: pollen tube growth	3.20E-02
95	GO:0009723: response to ethylene	3.37E-02
96	GO:0016192: vesicle-mediated transport	3.67E-02
97	GO:0045454: cell redox homeostasis	4.02E-02
98	GO:0009751: response to salicylic acid	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0004107: chorismate synthase activity	0.00E+00
2	GO:0004360: glutamine-fructose-6-phosphate transaminase (isomerizing) activity	0.00E+00
3	GO:0003746: translation elongation factor activity	2.65E-05
4	GO:0080042: ADP-glucose pyrophosphohydrolase activity	4.04E-05
5	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	4.04E-05
6	GO:1990259: histone-glutamine methyltransferase activity	4.04E-05
7	GO:0004638: phosphoribosylaminoimidazole carboxylase activity	4.04E-05
8	GO:0097367: carbohydrate derivative binding	4.04E-05
9	GO:0003735: structural constituent of ribosome	6.36E-05
10	GO:0017110: nucleoside-diphosphatase activity	1.00E-04
11	GO:0080041: ADP-ribose pyrophosphohydrolase activity	1.00E-04
12	GO:0051082: unfolded protein binding	1.06E-04
13	GO:0008649: rRNA methyltransferase activity	1.73E-04
14	GO:0070180: large ribosomal subunit rRNA binding	1.73E-04
15	GO:0000030: mannosyltransferase activity	1.73E-04
16	GO:0019201: nucleotide kinase activity	2.55E-04
17	GO:0005460: UDP-glucose transmembrane transporter activity	2.55E-04
18	GO:0005086: ARF guanyl-nucleotide exchange factor activity	3.43E-04
19	GO:0005459: UDP-galactose transmembrane transporter activity	4.37E-04
20	GO:0047631: ADP-ribose diphosphatase activity	4.37E-04
21	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.58E-04
22	GO:0000210: NAD+ diphosphatase activity	5.37E-04
23	GO:0004017: adenylate kinase activity	6.40E-04
24	GO:0030515: snoRNA binding	7.49E-04
25	GO:0043022: ribosome binding	8.61E-04
26	GO:0015288: porin activity	8.61E-04
27	GO:0003924: GTPase activity	8.69E-04
28	GO:0008308: voltage-gated anion channel activity	9.77E-04
29	GO:0046914: transition metal ion binding	9.77E-04
30	GO:0003743: translation initiation factor activity	2.71E-03
31	GO:0004298: threonine-type endopeptidase activity	2.72E-03
32	GO:0003756: protein disulfide isomerase activity	3.24E-03
33	GO:0005509: calcium ion binding	3.88E-03
34	GO:0010181: FMN binding	3.99E-03
35	GO:0016853: isomerase activity	3.99E-03
36	GO:0008483: transaminase activity	5.21E-03
37	GO:0050897: cobalt ion binding	7.49E-03
38	GO:0000149: SNARE binding	8.49E-03
39	GO:0005484: SNAP receptor activity	9.53E-03
40	GO:0043621: protein self-association	1.01E-02
41	GO:0016887: ATPase activity	1.01E-02
42	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.06E-02
43	GO:0051287: NAD binding	1.09E-02
44	GO:0030246: carbohydrate binding	1.56E-02
45	GO:0005507: copper ion binding	1.65E-02
46	GO:0003723: RNA binding	1.68E-02
47	GO:0005525: GTP binding	1.91E-02
48	GO:0008565: protein transporter activity	2.01E-02
49	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.12E-02
50	GO:0042802: identical protein binding	2.64E-02
51	GO:0004672: protein kinase activity	3.45E-02
52	GO:0003729: mRNA binding	3.49E-02
53	GO:0008233: peptidase activity	3.50E-02
54	GO:0005515: protein binding	3.98E-02
55	GO:0005524: ATP binding	4.90E-02
56	GO:0009055: electron carrier activity	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0031205: endoplasmic reticulum Sec complex	0.00E+00
2	GO:0005784: Sec61 translocon complex	0.00E+00
3	GO:0005730: nucleolus	1.37E-08
4	GO:0005788: endoplasmic reticulum lumen	1.91E-07
5	GO:0005773: vacuole	1.75E-06
6	GO:0022625: cytosolic large ribosomal subunit	2.45E-06
7	GO:0005747: mitochondrial respiratory chain complex I	2.85E-06
8	GO:0005774: vacuolar membrane	3.69E-06
9	GO:0005783: endoplasmic reticulum	4.04E-05
10	GO:0005739: mitochondrion	8.49E-05
11	GO:0005886: plasma membrane	9.00E-05
12	GO:0005758: mitochondrial intermembrane space	9.13E-05
13	GO:0005741: mitochondrial outer membrane	1.13E-04
14	GO:0005840: ribosome	1.22E-04
15	GO:0009507: chloroplast	2.44E-04
16	GO:0031428: box C/D snoRNP complex	5.37E-04
17	GO:0046930: pore complex	9.77E-04
18	GO:0031090: organelle membrane	1.10E-03
19	GO:0015030: Cajal body	1.22E-03
20	GO:0005740: mitochondrial envelope	1.35E-03
21	GO:0005852: eukaryotic translation initiation factor 3 complex	1.49E-03
22	GO:0032040: small-subunit processome	1.63E-03
23	GO:0022626: cytosolic ribosome	1.67E-03
24	GO:0030176: integral component of endoplasmic reticulum membrane	2.07E-03
25	GO:0045271: respiratory chain complex I	2.55E-03
26	GO:0070469: respiratory chain	2.55E-03
27	GO:0005839: proteasome core complex	2.72E-03
28	GO:0005829: cytosol	3.51E-03
29	GO:0000785: chromatin	4.58E-03
30	GO:0009536: plastid	5.57E-03
31	GO:0005789: endoplasmic reticulum membrane	7.36E-03
32	GO:0015934: large ribosomal subunit	7.49E-03
33	GO:0031201: SNARE complex	9.01E-03
34	GO:0031966: mitochondrial membrane	1.12E-02
35	GO:0009506: plasmodesma	1.16E-02
36	GO:0000502: proteasome complex	1.18E-02
37	GO:0048046: apoplast	2.21E-02
38	GO:0005618: cell wall	2.46E-02
39	GO:0009505: plant-type cell wall	2.94E-02
40	GO:0000139: Golgi membrane	3.18E-02
41	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	3.24E-02
42	GO:0005737: cytoplasm	3.83E-02
43	GO:0005743: mitochondrial inner membrane	4.43E-02
44	GO:0009570: chloroplast stroma	4.59E-02
45	GO:0016020: membrane	4.91E-02