GO Enrichment Analysis of Co-expressed Genes with
AT3G22260
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:2001253: regulation of histone H3-K36 trimethylation | 0.00E+00 |
| 2 | GO:0006987: activation of signaling protein activity involved in unfolded protein response | 0.00E+00 |
| 3 | GO:0006983: ER overload response | 0.00E+00 |
| 4 | GO:0010793: regulation of mRNA export from nucleus | 0.00E+00 |
| 5 | GO:0010499: proteasomal ubiquitin-independent protein catabolic process | 0.00E+00 |
| 6 | GO:0000188: inactivation of MAPK activity | 0.00E+00 |
| 7 | GO:0033542: fatty acid beta-oxidation, unsaturated, even number | 0.00E+00 |
| 8 | GO:0006182: cGMP biosynthetic process | 0.00E+00 |
| 9 | GO:0043048: dolichyl monophosphate biosynthetic process | 0.00E+00 |
| 10 | GO:0000162: tryptophan biosynthetic process | 8.48E-06 |
| 11 | GO:0006014: D-ribose metabolic process | 2.35E-05 |
| 12 | GO:0010265: SCF complex assembly | 1.02E-04 |
| 13 | GO:0006144: purine nucleobase metabolic process | 1.02E-04 |
| 14 | GO:0048363: mucilage pectin metabolic process | 1.02E-04 |
| 15 | GO:0048482: plant ovule morphogenesis | 1.02E-04 |
| 16 | GO:0019628: urate catabolic process | 1.02E-04 |
| 17 | GO:0008202: steroid metabolic process | 1.12E-04 |
| 18 | GO:0043069: negative regulation of programmed cell death | 1.33E-04 |
| 19 | GO:0002215: defense response to nematode | 2.40E-04 |
| 20 | GO:0007584: response to nutrient | 2.40E-04 |
| 21 | GO:0043066: negative regulation of apoptotic process | 2.40E-04 |
| 22 | GO:0015865: purine nucleotide transport | 2.40E-04 |
| 23 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 2.40E-04 |
| 24 | GO:0060151: peroxisome localization | 2.40E-04 |
| 25 | GO:0019441: tryptophan catabolic process to kynurenine | 2.40E-04 |
| 26 | GO:0050684: regulation of mRNA processing | 2.40E-04 |
| 27 | GO:0051645: Golgi localization | 2.40E-04 |
| 28 | GO:0051646: mitochondrion localization | 3.99E-04 |
| 29 | GO:0032784: regulation of DNA-templated transcription, elongation | 3.99E-04 |
| 30 | GO:0009062: fatty acid catabolic process | 3.99E-04 |
| 31 | GO:0090436: leaf pavement cell development | 3.99E-04 |
| 32 | GO:0046621: negative regulation of organ growth | 3.99E-04 |
| 33 | GO:0006468: protein phosphorylation | 5.14E-04 |
| 34 | GO:0046902: regulation of mitochondrial membrane permeability | 5.73E-04 |
| 35 | GO:0072334: UDP-galactose transmembrane transport | 5.73E-04 |
| 36 | GO:0009399: nitrogen fixation | 5.73E-04 |
| 37 | GO:0080001: mucilage extrusion from seed coat | 5.73E-04 |
| 38 | GO:0010116: positive regulation of abscisic acid biosynthetic process | 5.73E-04 |
| 39 | GO:0009742: brassinosteroid mediated signaling pathway | 5.97E-04 |
| 40 | GO:0019252: starch biosynthetic process | 7.51E-04 |
| 41 | GO:0009851: auxin biosynthetic process | 7.51E-04 |
| 42 | GO:0010107: potassium ion import | 7.62E-04 |
| 43 | GO:0006542: glutamine biosynthetic process | 7.62E-04 |
| 44 | GO:0010222: stem vascular tissue pattern formation | 7.62E-04 |
| 45 | GO:0010483: pollen tube reception | 7.62E-04 |
| 46 | GO:0006090: pyruvate metabolic process | 9.62E-04 |
| 47 | GO:0007029: endoplasmic reticulum organization | 9.62E-04 |
| 48 | GO:0010225: response to UV-C | 9.62E-04 |
| 49 | GO:0030308: negative regulation of cell growth | 9.62E-04 |
| 50 | GO:0010150: leaf senescence | 1.09E-03 |
| 51 | GO:1900425: negative regulation of defense response to bacterium | 1.17E-03 |
| 52 | GO:0048317: seed morphogenesis | 1.17E-03 |
| 53 | GO:1902074: response to salt | 1.65E-03 |
| 54 | GO:1900150: regulation of defense response to fungus | 1.90E-03 |
| 55 | GO:0032875: regulation of DNA endoreduplication | 1.90E-03 |
| 56 | GO:0009827: plant-type cell wall modification | 2.17E-03 |
| 57 | GO:0030968: endoplasmic reticulum unfolded protein response | 2.17E-03 |
| 58 | GO:0009808: lignin metabolic process | 2.17E-03 |
| 59 | GO:0006303: double-strand break repair via nonhomologous end joining | 2.17E-03 |
| 60 | GO:0007338: single fertilization | 2.45E-03 |
| 61 | GO:0009051: pentose-phosphate shunt, oxidative branch | 2.45E-03 |
| 62 | GO:0000723: telomere maintenance | 2.74E-03 |
| 63 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 2.87E-03 |
| 64 | GO:0009688: abscisic acid biosynthetic process | 3.05E-03 |
| 65 | GO:0052544: defense response by callose deposition in cell wall | 3.36E-03 |
| 66 | GO:0030148: sphingolipid biosynthetic process | 3.36E-03 |
| 67 | GO:0000038: very long-chain fatty acid metabolic process | 3.36E-03 |
| 68 | GO:0071365: cellular response to auxin stimulus | 3.69E-03 |
| 69 | GO:0000266: mitochondrial fission | 3.69E-03 |
| 70 | GO:0030048: actin filament-based movement | 4.02E-03 |
| 71 | GO:0006108: malate metabolic process | 4.02E-03 |
| 72 | GO:0048467: gynoecium development | 4.37E-03 |
| 73 | GO:0010167: response to nitrate | 4.72E-03 |
| 74 | GO:0007031: peroxisome organization | 4.72E-03 |
| 75 | GO:0042742: defense response to bacterium | 4.91E-03 |
| 76 | GO:0051260: protein homooligomerization | 6.24E-03 |
| 77 | GO:0006012: galactose metabolic process | 7.06E-03 |
| 78 | GO:0006633: fatty acid biosynthetic process | 7.10E-03 |
| 79 | GO:0010584: pollen exine formation | 7.48E-03 |
| 80 | GO:0050832: defense response to fungus | 7.56E-03 |
| 81 | GO:0042391: regulation of membrane potential | 8.35E-03 |
| 82 | GO:0010087: phloem or xylem histogenesis | 8.35E-03 |
| 83 | GO:0010118: stomatal movement | 8.35E-03 |
| 84 | GO:0007166: cell surface receptor signaling pathway | 8.93E-03 |
| 85 | GO:0042752: regulation of circadian rhythm | 9.26E-03 |
| 86 | GO:0046686: response to cadmium ion | 9.61E-03 |
| 87 | GO:0009749: response to glucose | 9.73E-03 |
| 88 | GO:0008654: phospholipid biosynthetic process | 9.73E-03 |
| 89 | GO:0002229: defense response to oomycetes | 1.02E-02 |
| 90 | GO:0006635: fatty acid beta-oxidation | 1.02E-02 |
| 91 | GO:0016032: viral process | 1.07E-02 |
| 92 | GO:0009630: gravitropism | 1.07E-02 |
| 93 | GO:0010090: trichome morphogenesis | 1.12E-02 |
| 94 | GO:1901657: glycosyl compound metabolic process | 1.12E-02 |
| 95 | GO:0006310: DNA recombination | 1.17E-02 |
| 96 | GO:0009567: double fertilization forming a zygote and endosperm | 1.17E-02 |
| 97 | GO:0001666: response to hypoxia | 1.32E-02 |
| 98 | GO:0007049: cell cycle | 1.35E-02 |
| 99 | GO:0009816: defense response to bacterium, incompatible interaction | 1.38E-02 |
| 100 | GO:0042128: nitrate assimilation | 1.43E-02 |
| 101 | GO:0016049: cell growth | 1.54E-02 |
| 102 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.55E-02 |
| 103 | GO:0016192: vesicle-mediated transport | 1.58E-02 |
| 104 | GO:0009817: defense response to fungus, incompatible interaction | 1.60E-02 |
| 105 | GO:0008219: cell death | 1.60E-02 |
| 106 | GO:0046777: protein autophosphorylation | 1.61E-02 |
| 107 | GO:0010311: lateral root formation | 1.65E-02 |
| 108 | GO:0048767: root hair elongation | 1.65E-02 |
| 109 | GO:0055114: oxidation-reduction process | 1.70E-02 |
| 110 | GO:0009867: jasmonic acid mediated signaling pathway | 1.89E-02 |
| 111 | GO:0016051: carbohydrate biosynthetic process | 1.89E-02 |
| 112 | GO:0006099: tricarboxylic acid cycle | 1.95E-02 |
| 113 | GO:0006869: lipid transport | 1.98E-02 |
| 114 | GO:0006839: mitochondrial transport | 2.07E-02 |
| 115 | GO:0006631: fatty acid metabolic process | 2.13E-02 |
| 116 | GO:0032259: methylation | 2.13E-02 |
| 117 | GO:0006897: endocytosis | 2.13E-02 |
| 118 | GO:0009751: response to salicylic acid | 2.19E-02 |
| 119 | GO:0051707: response to other organism | 2.26E-02 |
| 120 | GO:0006397: mRNA processing | 2.32E-02 |
| 121 | GO:0000209: protein polyubiquitination | 2.33E-02 |
| 122 | GO:0009846: pollen germination | 2.66E-02 |
| 123 | GO:0009809: lignin biosynthetic process | 2.80E-02 |
| 124 | GO:0006486: protein glycosylation | 2.80E-02 |
| 125 | GO:0010224: response to UV-B | 2.86E-02 |
| 126 | GO:0009873: ethylene-activated signaling pathway | 2.87E-02 |
| 127 | GO:0009620: response to fungus | 3.37E-02 |
| 128 | GO:0005975: carbohydrate metabolic process | 3.45E-02 |
| 129 | GO:0035556: intracellular signal transduction | 4.15E-02 |
| 130 | GO:0055085: transmembrane transport | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070577: lysine-acetylated histone binding | 0.00E+00 |
| 2 | GO:0004846: urate oxidase activity | 0.00E+00 |
| 3 | GO:0016504: peptidase activator activity | 0.00E+00 |
| 4 | GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity | 0.00E+00 |
| 5 | GO:0004168: dolichol kinase activity | 0.00E+00 |
| 6 | GO:0004834: tryptophan synthase activity | 9.35E-06 |
| 7 | GO:0004674: protein serine/threonine kinase activity | 2.88E-05 |
| 8 | GO:0004747: ribokinase activity | 3.34E-05 |
| 9 | GO:0008865: fructokinase activity | 5.89E-05 |
| 10 | GO:0008142: oxysterol binding | 7.46E-05 |
| 11 | GO:0071949: FAD binding | 9.24E-05 |
| 12 | GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity | 1.02E-04 |
| 13 | GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity | 1.02E-04 |
| 14 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 1.02E-04 |
| 15 | GO:0008809: carnitine racemase activity | 1.02E-04 |
| 16 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 1.02E-04 |
| 17 | GO:0033984: indole-3-glycerol-phosphate lyase activity | 1.02E-04 |
| 18 | GO:0016301: kinase activity | 1.63E-04 |
| 19 | GO:0032934: sterol binding | 2.40E-04 |
| 20 | GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding | 2.40E-04 |
| 21 | GO:0030742: GTP-dependent protein binding | 2.40E-04 |
| 22 | GO:0045140: inositol phosphoceramide synthase activity | 2.40E-04 |
| 23 | GO:0004061: arylformamidase activity | 2.40E-04 |
| 24 | GO:0004566: beta-glucuronidase activity | 2.40E-04 |
| 25 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 3.99E-04 |
| 26 | GO:0004383: guanylate cyclase activity | 3.99E-04 |
| 27 | GO:0016595: glutamate binding | 3.99E-04 |
| 28 | GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity | 3.99E-04 |
| 29 | GO:0005524: ATP binding | 5.23E-04 |
| 30 | GO:0004165: dodecenoyl-CoA delta-isomerase activity | 5.73E-04 |
| 31 | GO:0070628: proteasome binding | 7.62E-04 |
| 32 | GO:0004470: malic enzyme activity | 7.62E-04 |
| 33 | GO:0004031: aldehyde oxidase activity | 7.62E-04 |
| 34 | GO:0050302: indole-3-acetaldehyde oxidase activity | 7.62E-04 |
| 35 | GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor | 7.62E-04 |
| 36 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 7.62E-04 |
| 37 | GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity | 7.62E-04 |
| 38 | GO:0008948: oxaloacetate decarboxylase activity | 9.62E-04 |
| 39 | GO:0017137: Rab GTPase binding | 9.62E-04 |
| 40 | GO:0005496: steroid binding | 9.62E-04 |
| 41 | GO:0005471: ATP:ADP antiporter activity | 9.62E-04 |
| 42 | GO:0004356: glutamate-ammonia ligase activity | 9.62E-04 |
| 43 | GO:0005459: UDP-galactose transmembrane transporter activity | 9.62E-04 |
| 44 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.17E-03 |
| 45 | GO:0102391: decanoate--CoA ligase activity | 1.40E-03 |
| 46 | GO:0008143: poly(A) binding | 1.65E-03 |
| 47 | GO:0004467: long-chain fatty acid-CoA ligase activity | 1.65E-03 |
| 48 | GO:0042162: telomeric DNA binding | 1.65E-03 |
| 49 | GO:0004034: aldose 1-epimerase activity | 1.90E-03 |
| 50 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 1.90E-03 |
| 51 | GO:0005267: potassium channel activity | 2.17E-03 |
| 52 | GO:0004003: ATP-dependent DNA helicase activity | 2.45E-03 |
| 53 | GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity | 2.45E-03 |
| 54 | GO:0004713: protein tyrosine kinase activity | 3.05E-03 |
| 55 | GO:0008171: O-methyltransferase activity | 3.05E-03 |
| 56 | GO:0004521: endoribonuclease activity | 3.69E-03 |
| 57 | GO:0004022: alcohol dehydrogenase (NAD) activity | 4.02E-03 |
| 58 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 4.37E-03 |
| 59 | GO:0003774: motor activity | 4.37E-03 |
| 60 | GO:0016746: transferase activity, transferring acyl groups | 4.66E-03 |
| 61 | GO:0030552: cAMP binding | 4.72E-03 |
| 62 | GO:0030553: cGMP binding | 4.72E-03 |
| 63 | GO:0004725: protein tyrosine phosphatase activity | 5.09E-03 |
| 64 | GO:0043130: ubiquitin binding | 5.46E-03 |
| 65 | GO:0005216: ion channel activity | 5.85E-03 |
| 66 | GO:0033612: receptor serine/threonine kinase binding | 6.24E-03 |
| 67 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 7.28E-03 |
| 68 | GO:0030551: cyclic nucleotide binding | 8.35E-03 |
| 69 | GO:0005249: voltage-gated potassium channel activity | 8.35E-03 |
| 70 | GO:0004672: protein kinase activity | 8.79E-03 |
| 71 | GO:0010181: FMN binding | 9.26E-03 |
| 72 | GO:0016853: isomerase activity | 9.26E-03 |
| 73 | GO:0003684: damaged DNA binding | 1.17E-02 |
| 74 | GO:0016791: phosphatase activity | 1.17E-02 |
| 75 | GO:0051213: dioxygenase activity | 1.32E-02 |
| 76 | GO:0005516: calmodulin binding | 1.41E-02 |
| 77 | GO:0102483: scopolin beta-glucosidase activity | 1.48E-02 |
| 78 | GO:0030247: polysaccharide binding | 1.48E-02 |
| 79 | GO:0004721: phosphoprotein phosphatase activity | 1.48E-02 |
| 80 | GO:0004497: monooxygenase activity | 1.50E-02 |
| 81 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.54E-02 |
| 82 | GO:0061630: ubiquitin protein ligase activity | 1.58E-02 |
| 83 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.77E-02 |
| 84 | GO:0030145: manganese ion binding | 1.77E-02 |
| 85 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.89E-02 |
| 86 | GO:0008422: beta-glucosidase activity | 2.01E-02 |
| 87 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.39E-02 |
| 88 | GO:0051287: NAD binding | 2.59E-02 |
| 89 | GO:0003690: double-stranded DNA binding | 2.86E-02 |
| 90 | GO:0031625: ubiquitin protein ligase binding | 3.01E-02 |
| 91 | GO:0008289: lipid binding | 3.09E-02 |
| 92 | GO:0003779: actin binding | 3.52E-02 |
| 93 | GO:0015144: carbohydrate transmembrane transporter activity | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005829: cytosol | 3.43E-05 |
| 2 | GO:0005886: plasma membrane | 4.37E-05 |
| 3 | GO:0045252: oxoglutarate dehydrogenase complex | 1.02E-04 |
| 4 | GO:0043564: Ku70:Ku80 complex | 1.02E-04 |
| 5 | GO:0030176: integral component of endoplasmic reticulum membrane | 2.67E-04 |
| 6 | GO:0016021: integral component of membrane | 3.33E-04 |
| 7 | GO:0042406: extrinsic component of endoplasmic reticulum membrane | 3.99E-04 |
| 8 | GO:0005777: peroxisome | 4.15E-04 |
| 9 | GO:0031461: cullin-RING ubiquitin ligase complex | 5.73E-04 |
| 10 | GO:0005783: endoplasmic reticulum | 1.25E-03 |
| 11 | GO:0030173: integral component of Golgi membrane | 1.40E-03 |
| 12 | GO:0000794: condensed nuclear chromosome | 1.65E-03 |
| 13 | GO:0030131: clathrin adaptor complex | 1.90E-03 |
| 14 | GO:0000784: nuclear chromosome, telomeric region | 2.17E-03 |
| 15 | GO:0010494: cytoplasmic stress granule | 2.45E-03 |
| 16 | GO:0030125: clathrin vesicle coat | 3.05E-03 |
| 17 | GO:0016459: myosin complex | 3.05E-03 |
| 18 | GO:0005765: lysosomal membrane | 3.36E-03 |
| 19 | GO:0010008: endosome membrane | 3.89E-03 |
| 20 | GO:0043234: protein complex | 5.09E-03 |
| 21 | GO:0009524: phragmoplast | 5.97E-03 |
| 22 | GO:0005905: clathrin-coated pit | 6.24E-03 |
| 23 | GO:0005839: proteasome core complex | 6.24E-03 |
| 24 | GO:0005778: peroxisomal membrane | 1.22E-02 |
| 25 | GO:0005618: cell wall | 1.25E-02 |
| 26 | GO:0000151: ubiquitin ligase complex | 1.60E-02 |
| 27 | GO:0005819: spindle | 2.01E-02 |
| 28 | GO:0005794: Golgi apparatus | 2.83E-02 |
| 29 | GO:0005635: nuclear envelope | 2.94E-02 |
| 30 | GO:0005774: vacuolar membrane | 3.16E-02 |
| 31 | GO:0005789: endoplasmic reticulum membrane | 3.48E-02 |
| 32 | GO:0012505: endomembrane system | 3.52E-02 |