GO Enrichment Analysis of Co-expressed Genes with
AT3G21260
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 2 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 3 | GO:0009773: photosynthetic electron transport in photosystem I | 4.15E-09 |
| 4 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.83E-06 |
| 5 | GO:0009704: de-etiolation | 2.41E-05 |
| 6 | GO:0018298: protein-chromophore linkage | 3.79E-05 |
| 7 | GO:0051180: vitamin transport | 5.79E-05 |
| 8 | GO:0009443: pyridoxal 5'-phosphate salvage | 5.79E-05 |
| 9 | GO:0030974: thiamine pyrophosphate transport | 5.79E-05 |
| 10 | GO:0046900: tetrahydrofolylpolyglutamate metabolic process | 5.79E-05 |
| 11 | GO:0010362: negative regulation of anion channel activity by blue light | 5.79E-05 |
| 12 | GO:0071277: cellular response to calcium ion | 5.79E-05 |
| 13 | GO:0009658: chloroplast organization | 7.41E-05 |
| 14 | GO:0009644: response to high light intensity | 9.08E-05 |
| 15 | GO:0080005: photosystem stoichiometry adjustment | 1.41E-04 |
| 16 | GO:0015893: drug transport | 1.41E-04 |
| 17 | GO:0034755: iron ion transmembrane transport | 1.41E-04 |
| 18 | GO:0006954: inflammatory response | 2.40E-04 |
| 19 | GO:0000913: preprophase band assembly | 2.40E-04 |
| 20 | GO:0031022: nuclear migration along microfilament | 2.40E-04 |
| 21 | GO:0071484: cellular response to light intensity | 3.49E-04 |
| 22 | GO:0007623: circadian rhythm | 4.24E-04 |
| 23 | GO:0009902: chloroplast relocation | 4.66E-04 |
| 24 | GO:0019464: glycine decarboxylation via glycine cleavage system | 4.66E-04 |
| 25 | GO:0006810: transport | 5.75E-04 |
| 26 | GO:0010117: photoprotection | 5.92E-04 |
| 27 | GO:0006564: L-serine biosynthetic process | 5.92E-04 |
| 28 | GO:0009904: chloroplast accumulation movement | 5.92E-04 |
| 29 | GO:0006544: glycine metabolic process | 5.92E-04 |
| 30 | GO:0043097: pyrimidine nucleoside salvage | 5.92E-04 |
| 31 | GO:0006563: L-serine metabolic process | 7.24E-04 |
| 32 | GO:0006206: pyrimidine nucleobase metabolic process | 7.24E-04 |
| 33 | GO:0009903: chloroplast avoidance movement | 8.63E-04 |
| 34 | GO:0009854: oxidative photosynthetic carbon pathway | 8.63E-04 |
| 35 | GO:0009853: photorespiration | 8.97E-04 |
| 36 | GO:0009645: response to low light intensity stimulus | 1.01E-03 |
| 37 | GO:0048564: photosystem I assembly | 1.16E-03 |
| 38 | GO:0071482: cellular response to light stimulus | 1.32E-03 |
| 39 | GO:0009821: alkaloid biosynthetic process | 1.48E-03 |
| 40 | GO:0090333: regulation of stomatal closure | 1.48E-03 |
| 41 | GO:0009638: phototropism | 1.65E-03 |
| 42 | GO:0035999: tetrahydrofolate interconversion | 1.65E-03 |
| 43 | GO:0006879: cellular iron ion homeostasis | 2.02E-03 |
| 44 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.02E-03 |
| 45 | GO:0010628: positive regulation of gene expression | 2.41E-03 |
| 46 | GO:0006541: glutamine metabolic process | 2.62E-03 |
| 47 | GO:0019253: reductive pentose-phosphate cycle | 2.62E-03 |
| 48 | GO:0009058: biosynthetic process | 2.82E-03 |
| 49 | GO:0009735: response to cytokinin | 2.85E-03 |
| 50 | GO:0009768: photosynthesis, light harvesting in photosystem I | 3.49E-03 |
| 51 | GO:0007017: microtubule-based process | 3.49E-03 |
| 52 | GO:0016226: iron-sulfur cluster assembly | 3.95E-03 |
| 53 | GO:0010118: stomatal movement | 4.95E-03 |
| 54 | GO:0042631: cellular response to water deprivation | 4.95E-03 |
| 55 | GO:0006520: cellular amino acid metabolic process | 5.21E-03 |
| 56 | GO:0015986: ATP synthesis coupled proton transport | 5.48E-03 |
| 57 | GO:0007018: microtubule-based movement | 5.48E-03 |
| 58 | GO:0016032: viral process | 6.31E-03 |
| 59 | GO:0080167: response to karrikin | 7.02E-03 |
| 60 | GO:0000910: cytokinesis | 7.47E-03 |
| 61 | GO:0046777: protein autophosphorylation | 7.50E-03 |
| 62 | GO:0015979: photosynthesis | 8.01E-03 |
| 63 | GO:0042128: nitrate assimilation | 8.40E-03 |
| 64 | GO:0000160: phosphorelay signal transduction system | 9.69E-03 |
| 65 | GO:0009637: response to blue light | 1.11E-02 |
| 66 | GO:0009409: response to cold | 1.15E-02 |
| 67 | GO:0006839: mitochondrial transport | 1.21E-02 |
| 68 | GO:0051707: response to other organism | 1.32E-02 |
| 69 | GO:0055114: oxidation-reduction process | 1.71E-02 |
| 70 | GO:0006857: oligopeptide transport | 1.71E-02 |
| 71 | GO:0006417: regulation of translation | 1.75E-02 |
| 72 | GO:0009626: plant-type hypersensitive response | 1.92E-02 |
| 73 | GO:0006633: fatty acid biosynthetic process | 2.89E-02 |
| 74 | GO:0006508: proteolysis | 3.21E-02 |
| 75 | GO:0010468: regulation of gene expression | 3.51E-02 |
| 76 | GO:0042742: defense response to bacterium | 3.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 2 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 3 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 4 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 5 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 6 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 3.53E-06 |
| 7 | GO:0048038: quinone binding | 1.34E-05 |
| 8 | GO:0004033: aldo-keto reductase (NADP) activity | 2.41E-05 |
| 9 | GO:0008242: omega peptidase activity | 5.79E-05 |
| 10 | GO:0090422: thiamine pyrophosphate transporter activity | 5.79E-05 |
| 11 | GO:0008266: poly(U) RNA binding | 1.06E-04 |
| 12 | GO:0034722: gamma-glutamyl-peptidase activity | 1.41E-04 |
| 13 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.41E-04 |
| 14 | GO:0004176: ATP-dependent peptidase activity | 1.87E-04 |
| 15 | GO:0070402: NADPH binding | 2.40E-04 |
| 16 | GO:0032947: protein complex scaffold | 2.40E-04 |
| 17 | GO:0009882: blue light photoreceptor activity | 3.49E-04 |
| 18 | GO:0016168: chlorophyll binding | 5.85E-04 |
| 19 | GO:0004372: glycine hydroxymethyltransferase activity | 5.92E-04 |
| 20 | GO:0004849: uridine kinase activity | 8.63E-04 |
| 21 | GO:0043022: ribosome binding | 1.16E-03 |
| 22 | GO:0005198: structural molecule activity | 1.28E-03 |
| 23 | GO:0015078: hydrogen ion transmembrane transporter activity | 1.32E-03 |
| 24 | GO:0051287: NAD binding | 1.37E-03 |
| 25 | GO:0016844: strictosidine synthase activity | 1.65E-03 |
| 26 | GO:0005381: iron ion transmembrane transporter activity | 1.65E-03 |
| 27 | GO:0003777: microtubule motor activity | 1.68E-03 |
| 28 | GO:0015386: potassium:proton antiporter activity | 2.02E-03 |
| 29 | GO:0016491: oxidoreductase activity | 2.33E-03 |
| 30 | GO:0000155: phosphorelay sensor kinase activity | 2.41E-03 |
| 31 | GO:0030170: pyridoxal phosphate binding | 2.96E-03 |
| 32 | GO:0031409: pigment binding | 3.04E-03 |
| 33 | GO:0051536: iron-sulfur cluster binding | 3.26E-03 |
| 34 | GO:0015079: potassium ion transmembrane transporter activity | 3.49E-03 |
| 35 | GO:0043424: protein histidine kinase binding | 3.49E-03 |
| 36 | GO:0022891: substrate-specific transmembrane transporter activity | 4.20E-03 |
| 37 | GO:0010181: FMN binding | 5.48E-03 |
| 38 | GO:0008233: peptidase activity | 6.90E-03 |
| 39 | GO:0016597: amino acid binding | 7.47E-03 |
| 40 | GO:0005215: transporter activity | 8.86E-03 |
| 41 | GO:0004222: metalloendopeptidase activity | 1.00E-02 |
| 42 | GO:0015293: symporter activity | 1.44E-02 |
| 43 | GO:0008017: microtubule binding | 3.20E-02 |
| 44 | GO:0042802: identical protein binding | 3.67E-02 |
| 45 | GO:0008168: methyltransferase activity | 4.11E-02 |
| 46 | GO:0016788: hydrolase activity, acting on ester bonds | 4.28E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009535: chloroplast thylakoid membrane | 3.89E-16 |
| 2 | GO:0009507: chloroplast | 4.24E-16 |
| 3 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.24E-09 |
| 4 | GO:0009534: chloroplast thylakoid | 5.75E-07 |
| 5 | GO:0009941: chloroplast envelope | 5.44E-05 |
| 6 | GO:0009782: photosystem I antenna complex | 5.79E-05 |
| 7 | GO:0030286: dynein complex | 4.66E-04 |
| 8 | GO:0010319: stromule | 4.95E-04 |
| 9 | GO:0009579: thylakoid | 6.99E-04 |
| 10 | GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o) | 7.24E-04 |
| 11 | GO:0016020: membrane | 1.44E-03 |
| 12 | GO:0016021: integral component of membrane | 2.35E-03 |
| 13 | GO:0010287: plastoglobule | 2.54E-03 |
| 14 | GO:0030076: light-harvesting complex | 2.82E-03 |
| 15 | GO:0005875: microtubule associated complex | 3.04E-03 |
| 16 | GO:0042651: thylakoid membrane | 3.49E-03 |
| 17 | GO:0005871: kinesin complex | 4.69E-03 |
| 18 | GO:0009523: photosystem II | 5.75E-03 |
| 19 | GO:0009504: cell plate | 5.75E-03 |
| 20 | GO:0005694: chromosome | 6.31E-03 |
| 21 | GO:0009570: chloroplast stroma | 7.84E-03 |
| 22 | GO:0005819: spindle | 1.18E-02 |
| 23 | GO:0009706: chloroplast inner membrane | 2.10E-02 |
| 24 | GO:0009543: chloroplast thylakoid lumen | 2.46E-02 |
| 25 | GO:0005623: cell | 2.51E-02 |
| 26 | GO:0009524: phragmoplast | 2.55E-02 |
| 27 | GO:0005759: mitochondrial matrix | 2.89E-02 |
| 28 | GO:0048046: apoplast | 3.96E-02 |
| 29 | GO:0005874: microtubule | 4.80E-02 |
| 30 | GO:0031969: chloroplast membrane | 4.92E-02 |