co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G21190

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080094: response to trehalose-6-phosphate	0.00E+00
2	GO:0007638: mechanosensory behavior	0.00E+00
3	GO:0070272: proton-transporting ATP synthase complex biogenesis	0.00E+00
4	GO:0071555: cell wall organization	4.75E-07
5	GO:0006546: glycine catabolic process	3.53E-05
6	GO:0006730: one-carbon metabolic process	8.94E-05
7	GO:1901259: chloroplast rRNA processing	1.15E-04
8	GO:0016117: carotenoid biosynthetic process	1.30E-04
9	GO:0007155: cell adhesion	1.94E-04
10	GO:0019510: S-adenosylhomocysteine catabolic process	2.22E-04
11	GO:0006169: adenosine salvage	2.22E-04
12	GO:0033481: galacturonate biosynthetic process	2.22E-04
13	GO:0010192: mucilage biosynthetic process	4.05E-04
14	GO:1902326: positive regulation of chlorophyll biosynthetic process	4.95E-04
15	GO:1903338: regulation of cell wall organization or biogenesis	4.95E-04
16	GO:0033353: S-adenosylmethionine cycle	4.95E-04
17	GO:0015786: UDP-glucose transport	4.95E-04
18	GO:1904143: positive regulation of carotenoid biosynthetic process	4.95E-04
19	GO:0080183: response to photooxidative stress	4.95E-04
20	GO:0030388: fructose 1,6-bisphosphate metabolic process	4.95E-04
21	GO:0006094: gluconeogenesis	6.09E-04
22	GO:0009767: photosynthetic electron transport chain	6.09E-04
23	GO:0006000: fructose metabolic process	8.05E-04
24	GO:0006518: peptide metabolic process	8.05E-04
25	GO:0006696: ergosterol biosynthetic process	8.05E-04
26	GO:0015783: GDP-fucose transport	8.05E-04
27	GO:0090506: axillary shoot meristem initiation	8.05E-04
28	GO:0009833: plant-type primary cell wall biogenesis	8.53E-04
29	GO:0055114: oxidation-reduction process	9.29E-04
30	GO:0016998: cell wall macromolecule catabolic process	1.13E-03
31	GO:0051085: chaperone mediated protein folding requiring cofactor	1.15E-03
32	GO:0072334: UDP-galactose transmembrane transport	1.15E-03
33	GO:0016556: mRNA modification	1.15E-03
34	GO:0043572: plastid fission	1.15E-03
35	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.15E-03
36	GO:0007231: osmosensory signaling pathway	1.15E-03
37	GO:0030245: cellulose catabolic process	1.24E-03
38	GO:0080092: regulation of pollen tube growth	1.24E-03
39	GO:0019722: calcium-mediated signaling	1.46E-03
40	GO:0019464: glycine decarboxylation via glycine cleavage system	1.53E-03
41	GO:0009765: photosynthesis, light harvesting	1.53E-03
42	GO:0033500: carbohydrate homeostasis	1.53E-03
43	GO:0031122: cytoplasmic microtubule organization	1.53E-03
44	GO:0009956: radial pattern formation	1.53E-03
45	GO:0046686: response to cadmium ion	1.61E-03
46	GO:0006096: glycolytic process	1.68E-03
47	GO:0009741: response to brassinosteroid	1.84E-03
48	GO:0048359: mucilage metabolic process involved in seed coat development	1.95E-03
49	GO:0046785: microtubule polymerization	1.95E-03
50	GO:0016120: carotene biosynthetic process	1.95E-03
51	GO:0016123: xanthophyll biosynthetic process	1.95E-03
52	GO:0044209: AMP salvage	1.95E-03
53	GO:0016132: brassinosteroid biosynthetic process	2.26E-03
54	GO:0006555: methionine metabolic process	2.40E-03
55	GO:0070814: hydrogen sulfide biosynthetic process	2.40E-03
56	GO:0010358: leaf shaping	2.40E-03
57	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	2.40E-03
58	GO:0010090: trichome morphogenesis	2.57E-03
59	GO:0009955: adaxial/abaxial pattern specification	2.89E-03
60	GO:0010067: procambium histogenesis	2.89E-03
61	GO:0042026: protein refolding	2.89E-03
62	GO:0006694: steroid biosynthetic process	2.89E-03
63	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	2.89E-03
64	GO:0007267: cell-cell signaling	2.91E-03
65	GO:0050829: defense response to Gram-negative bacterium	3.40E-03
66	GO:0006955: immune response	3.40E-03
67	GO:0006633: fatty acid biosynthetic process	3.78E-03
68	GO:0048564: photosystem I assembly	3.94E-03
69	GO:0009819: drought recovery	3.94E-03
70	GO:0006875: cellular metal ion homeostasis	3.94E-03
71	GO:0052543: callose deposition in cell wall	3.94E-03
72	GO:0000160: phosphorelay signal transduction system	4.46E-03
73	GO:0006002: fructose 6-phosphate metabolic process	4.51E-03
74	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	4.51E-03
75	GO:0032544: plastid translation	4.51E-03
76	GO:0009808: lignin metabolic process	4.51E-03
77	GO:0005975: carbohydrate metabolic process	4.98E-03
78	GO:0006098: pentose-phosphate shunt	5.11E-03
79	GO:0006754: ATP biosynthetic process	5.11E-03
80	GO:0048589: developmental growth	5.11E-03
81	GO:0000902: cell morphogenesis	5.11E-03
82	GO:0016051: carbohydrate biosynthetic process	5.38E-03
83	GO:0035999: tetrahydrofolate interconversion	5.74E-03
84	GO:0009970: cellular response to sulfate starvation	6.38E-03
85	GO:0019538: protein metabolic process	6.38E-03
86	GO:0000103: sulfate assimilation	6.38E-03
87	GO:0000038: very long-chain fatty acid metabolic process	7.06E-03
88	GO:0006816: calcium ion transport	7.06E-03
89	GO:0009773: photosynthetic electron transport in photosystem I	7.06E-03
90	GO:0019684: photosynthesis, light reaction	7.06E-03
91	GO:0018119: peptidyl-cysteine S-nitrosylation	7.06E-03
92	GO:0010015: root morphogenesis	7.06E-03
93	GO:0009658: chloroplast organization	7.43E-03
94	GO:0045037: protein import into chloroplast stroma	7.76E-03
95	GO:0009725: response to hormone	8.48E-03
96	GO:0005986: sucrose biosynthetic process	8.48E-03
97	GO:0010020: chloroplast fission	9.23E-03
98	GO:0010207: photosystem II assembly	9.23E-03
99	GO:0009933: meristem structural organization	9.23E-03
100	GO:0019253: reductive pentose-phosphate cycle	9.23E-03
101	GO:0010223: secondary shoot formation	9.23E-03
102	GO:0009736: cytokinin-activated signaling pathway	9.36E-03
103	GO:0009969: xyloglucan biosynthetic process	1.00E-02
104	GO:0009225: nucleotide-sugar metabolic process	1.00E-02
105	GO:0010167: response to nitrate	1.00E-02
106	GO:0070588: calcium ion transmembrane transport	1.00E-02
107	GO:0019762: glucosinolate catabolic process	1.08E-02
108	GO:0007010: cytoskeleton organization	1.16E-02
109	GO:0045454: cell redox homeostasis	1.23E-02
110	GO:0007017: microtubule-based process	1.24E-02
111	GO:0009742: brassinosteroid mediated signaling pathway	1.42E-02
112	GO:0007005: mitochondrion organization	1.42E-02
113	GO:0006810: transport	1.48E-02
114	GO:0009294: DNA mediated transformation	1.51E-02
115	GO:0001944: vasculature development	1.51E-02
116	GO:0010089: xylem development	1.60E-02
117	GO:0009753: response to jasmonic acid	1.75E-02
118	GO:0042335: cuticle development	1.79E-02
119	GO:0000271: polysaccharide biosynthetic process	1.79E-02
120	GO:0010087: phloem or xylem histogenesis	1.79E-02
121	GO:0010268: brassinosteroid homeostasis	1.89E-02
122	GO:0008360: regulation of cell shape	1.89E-02
123	GO:0045489: pectin biosynthetic process	1.89E-02
124	GO:0010305: leaf vascular tissue pattern formation	1.89E-02
125	GO:0048868: pollen tube development	1.89E-02
126	GO:0009646: response to absence of light	1.99E-02
127	GO:0019252: starch biosynthetic process	2.09E-02
128	GO:0010583: response to cyclopentenone	2.30E-02
129	GO:0016032: viral process	2.30E-02
130	GO:0032502: developmental process	2.30E-02
131	GO:0045490: pectin catabolic process	2.31E-02
132	GO:0016125: sterol metabolic process	2.52E-02
133	GO:0010286: heat acclimation	2.63E-02
134	GO:0071805: potassium ion transmembrane transport	2.63E-02
135	GO:0016126: sterol biosynthetic process	2.85E-02
136	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.97E-02
137	GO:0009607: response to biotic stimulus	2.97E-02
138	GO:0042128: nitrate assimilation	3.09E-02
139	GO:0009627: systemic acquired resistance	3.09E-02
140	GO:0010411: xyloglucan metabolic process	3.20E-02
141	GO:0009416: response to light stimulus	3.29E-02
142	GO:0016049: cell growth	3.32E-02
143	GO:0009826: unidimensional cell growth	3.45E-02
144	GO:0009817: defense response to fungus, incompatible interaction	3.45E-02
145	GO:0030244: cellulose biosynthetic process	3.45E-02
146	GO:0008219: cell death	3.45E-02
147	GO:0009832: plant-type cell wall biogenesis	3.57E-02
148	GO:0048767: root hair elongation	3.57E-02
149	GO:0009834: plant-type secondary cell wall biogenesis	3.70E-02
150	GO:0009407: toxin catabolic process	3.70E-02
151	GO:0007568: aging	3.82E-02
152	GO:0009867: jasmonic acid mediated signaling pathway	4.08E-02
153	GO:0006839: mitochondrial transport	4.47E-02
154	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.57E-02
155	GO:0006631: fatty acid metabolic process	4.61E-02
156	GO:0009744: response to sucrose	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0016631: enoyl-[acyl-carrier-protein] reductase activity	0.00E+00
2	GO:0048307: ferredoxin-nitrite reductase activity	0.00E+00
3	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
4	GO:0050613: delta14-sterol reductase activity	0.00E+00
5	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
6	GO:0046905: phytoene synthase activity	0.00E+00
7	GO:0050421: nitrite reductase (NO-forming) activity	0.00E+00
8	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
9	GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity	0.00E+00
10	GO:0047889: ferredoxin-nitrate reductase activity	0.00E+00
11	GO:0050614: delta24-sterol reductase activity	0.00E+00
12	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	0.00E+00
13	GO:0009974: zeinoxanthin epsilon hydroxylase activity	0.00E+00
14	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	1.15E-04
15	GO:0051753: mannan synthase activity	1.15E-04
16	GO:0004013: adenosylhomocysteinase activity	2.22E-04
17	GO:0042834: peptidoglycan binding	2.22E-04
18	GO:0008568: microtubule-severing ATPase activity	2.22E-04
19	GO:0051996: squalene synthase activity	2.22E-04
20	GO:0004001: adenosine kinase activity	2.22E-04
21	GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity	2.22E-04
22	GO:0015088: copper uptake transmembrane transporter activity	2.22E-04
23	GO:0010012: steroid 22-alpha hydroxylase activity	2.22E-04
24	GO:0005089: Rho guanyl-nucleotide exchange factor activity	4.69E-04
25	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	4.95E-04
26	GO:0008805: carbon-monoxide oxygenase activity	4.95E-04
27	GO:0004802: transketolase activity	4.95E-04
28	GO:0008967: phosphoglycolate phosphatase activity	4.95E-04
29	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	4.95E-04
30	GO:0004047: aminomethyltransferase activity	4.95E-04
31	GO:0070330: aromatase activity	8.05E-04
32	GO:0004148: dihydrolipoyl dehydrogenase activity	8.05E-04
33	GO:0004781: sulfate adenylyltransferase (ATP) activity	8.05E-04
34	GO:0005457: GDP-fucose transmembrane transporter activity	8.05E-04
35	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	9.39E-04
36	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	1.15E-03
37	GO:0004375: glycine dehydrogenase (decarboxylating) activity	1.15E-03
38	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	1.15E-03
39	GO:0005460: UDP-glucose transmembrane transporter activity	1.15E-03
40	GO:0001872: (1->3)-beta-D-glucan binding	1.15E-03
41	GO:0008810: cellulase activity	1.35E-03
42	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	1.53E-03
43	GO:1990137: plant seed peroxidase activity	1.53E-03
44	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	1.53E-03
45	GO:0050378: UDP-glucuronate 4-epimerase activity	1.53E-03
46	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.53E-03
47	GO:0008374: O-acyltransferase activity	1.95E-03
48	GO:0005459: UDP-galactose transmembrane transporter activity	1.95E-03
49	GO:0018685: alkane 1-monooxygenase activity	1.95E-03
50	GO:0004332: fructose-bisphosphate aldolase activity	2.40E-03
51	GO:0042578: phosphoric ester hydrolase activity	2.40E-03
52	GO:0080030: methyl indole-3-acetate esterase activity	2.40E-03
53	GO:0000156: phosphorelay response regulator activity	2.57E-03
54	GO:0003824: catalytic activity	2.63E-03
55	GO:0016759: cellulose synthase activity	2.74E-03
56	GO:0019843: rRNA binding	2.83E-03
57	GO:0051920: peroxiredoxin activity	2.89E-03
58	GO:0005200: structural constituent of cytoskeleton	2.91E-03
59	GO:0043295: glutathione binding	3.40E-03
60	GO:0004033: aldo-keto reductase (NADP) activity	3.94E-03
61	GO:0016209: antioxidant activity	3.94E-03
62	GO:0003843: 1,3-beta-D-glucan synthase activity	4.51E-03
63	GO:0004222: metalloendopeptidase activity	4.68E-03
64	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	5.11E-03
65	GO:0005381: iron ion transmembrane transporter activity	5.74E-03
66	GO:0030234: enzyme regulator activity	6.38E-03
67	GO:0044183: protein binding involved in protein folding	7.06E-03
68	GO:0047372: acylglycerol lipase activity	7.06E-03
69	GO:0008378: galactosyltransferase activity	7.76E-03
70	GO:0004565: beta-galactosidase activity	8.48E-03
71	GO:0004089: carbonate dehydratase activity	8.48E-03
72	GO:0005262: calcium channel activity	8.48E-03
73	GO:0016757: transferase activity, transferring glycosyl groups	8.77E-03
74	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	9.23E-03
75	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.08E-02
76	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.08E-02
77	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.08E-02
78	GO:0004857: enzyme inhibitor activity	1.16E-02
79	GO:0016491: oxidoreductase activity	1.23E-02
80	GO:0015079: potassium ion transmembrane transporter activity	1.24E-02
81	GO:0030599: pectinesterase activity	1.26E-02
82	GO:0004176: ATP-dependent peptidase activity	1.33E-02
83	GO:0033612: receptor serine/threonine kinase binding	1.33E-02
84	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.42E-02
85	GO:0005507: copper ion binding	1.49E-02
86	GO:0030570: pectate lyase activity	1.51E-02
87	GO:0016760: cellulose synthase (UDP-forming) activity	1.51E-02
88	GO:0016758: transferase activity, transferring hexosyl groups	1.63E-02
89	GO:0005102: receptor binding	1.70E-02
90	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.72E-02
91	GO:0019901: protein kinase binding	2.09E-02
92	GO:0004872: receptor activity	2.09E-02
93	GO:0048038: quinone binding	2.19E-02
94	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.19E-02
95	GO:0008017: microtubule binding	2.42E-02
96	GO:0008483: transaminase activity	2.63E-02
97	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.63E-02
98	GO:0008237: metallopeptidase activity	2.63E-02
99	GO:0016887: ATPase activity	2.78E-02
100	GO:0030247: polysaccharide binding	3.20E-02
101	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.20E-02
102	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.70E-02
103	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.82E-02
104	GO:0050897: cobalt ion binding	3.82E-02
105	GO:0030145: manganese ion binding	3.82E-02
106	GO:0003746: translation elongation factor activity	4.08E-02
107	GO:0050660: flavin adenine dinucleotide binding	4.13E-02
108	GO:0051539: 4 iron, 4 sulfur cluster binding	4.47E-02
109	GO:0004364: glutathione transferase activity	4.74E-02
110	GO:0004185: serine-type carboxypeptidase activity	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0005835: fatty acid synthase complex	0.00E+00
2	GO:0009344: nitrite reductase complex [NAD(P)H]	0.00E+00
3	GO:0009507: chloroplast	8.97E-10
4	GO:0048046: apoplast	3.01E-09
5	GO:0031225: anchored component of membrane	1.28E-06
6	GO:0009941: chloroplast envelope	4.60E-06
7	GO:0009570: chloroplast stroma	5.77E-06
8	GO:0046658: anchored component of plasma membrane	2.33E-05
9	GO:0005886: plasma membrane	2.52E-05
10	GO:0009579: thylakoid	2.99E-05
11	GO:0009654: photosystem II oxygen evolving complex	6.72E-05
12	GO:0009535: chloroplast thylakoid membrane	9.41E-05
13	GO:0009534: chloroplast thylakoid	1.81E-04
14	GO:0009505: plant-type cell wall	2.77E-04
15	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.91E-04
16	GO:0045254: pyruvate dehydrogenase complex	4.95E-04
17	GO:0005618: cell wall	5.64E-04
18	GO:0030095: chloroplast photosystem II	6.86E-04
19	GO:0005853: eukaryotic translation elongation factor 1 complex	8.05E-04
20	GO:0005960: glycine cleavage complex	1.15E-03
21	GO:0005576: extracellular region	1.29E-03
22	GO:0031897: Tic complex	1.53E-03
23	GO:0019898: extrinsic component of membrane	2.12E-03
24	GO:0009506: plasmodesma	2.88E-03
25	GO:0005794: Golgi apparatus	3.26E-03
26	GO:0000139: Golgi membrane	3.98E-03
27	GO:0000148: 1,3-beta-D-glucan synthase complex	4.51E-03
28	GO:0009539: photosystem II reaction center	4.51E-03
29	GO:0005811: lipid particle	4.51E-03
30	GO:0045298: tubulin complex	5.11E-03
31	GO:0005763: mitochondrial small ribosomal subunit	5.11E-03
32	GO:0055028: cortical microtubule	6.38E-03
33	GO:0016324: apical plasma membrane	6.38E-03
34	GO:0005856: cytoskeleton	7.80E-03
35	GO:0030176: integral component of endoplasmic reticulum membrane	1.00E-02
36	GO:0009706: chloroplast inner membrane	1.34E-02
37	GO:0016020: membrane	1.46E-02
38	GO:0010287: plastoglobule	1.59E-02
39	GO:0009543: chloroplast thylakoid lumen	1.67E-02
40	GO:0016021: integral component of membrane	1.94E-02
41	GO:0005759: mitochondrial matrix	2.11E-02
42	GO:0032580: Golgi cisterna membrane	2.52E-02
43	GO:0005615: extracellular space	2.59E-02
44	GO:0010319: stromule	2.63E-02
45	GO:0005874: microtubule	4.28E-02
46	GO:0031969: chloroplast membrane	4.42E-02