co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G20410

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	0.00E+00
2	GO:0009991: response to extracellular stimulus	0.00E+00
3	GO:0002221: pattern recognition receptor signaling pathway	6.05E-07
4	GO:0006468: protein phosphorylation	1.36E-06
5	GO:0042742: defense response to bacterium	5.40E-06
6	GO:0080142: regulation of salicylic acid biosynthetic process	1.03E-05
7	GO:0048482: plant ovule morphogenesis	1.08E-04
8	GO:0019628: urate catabolic process	1.08E-04
9	GO:0043547: positive regulation of GTPase activity	1.08E-04
10	GO:0051245: negative regulation of cellular defense response	1.08E-04
11	GO:0006144: purine nucleobase metabolic process	1.08E-04
12	GO:0009968: negative regulation of signal transduction	1.08E-04
13	GO:0043069: negative regulation of programmed cell death	1.44E-04
14	GO:0009867: jasmonic acid mediated signaling pathway	1.85E-04
15	GO:0007584: response to nutrient	2.52E-04
16	GO:0031349: positive regulation of defense response	2.52E-04
17	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	2.52E-04
18	GO:0010541: acropetal auxin transport	2.52E-04
19	GO:0015914: phospholipid transport	2.52E-04
20	GO:0007031: peroxisome organization	2.87E-04
21	GO:0070588: calcium ion transmembrane transport	2.87E-04
22	GO:0048281: inflorescence morphogenesis	4.19E-04
23	GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening	4.19E-04
24	GO:0046621: negative regulation of organ growth	4.19E-04
25	GO:0006612: protein targeting to membrane	6.01E-04
26	GO:0061025: membrane fusion	7.52E-04
27	GO:0060548: negative regulation of cell death	7.98E-04
28	GO:0010363: regulation of plant-type hypersensitive response	7.98E-04
29	GO:0010107: potassium ion import	7.98E-04
30	GO:0006904: vesicle docking involved in exocytosis	1.09E-03
31	GO:0048317: seed morphogenesis	1.23E-03
32	GO:0009414: response to water deprivation	1.23E-03
33	GO:0007166: cell surface receptor signaling pathway	1.41E-03
34	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.47E-03
35	GO:0000911: cytokinesis by cell plate formation	1.47E-03
36	GO:0009612: response to mechanical stimulus	1.47E-03
37	GO:0006694: steroid biosynthetic process	1.47E-03
38	GO:0009817: defense response to fungus, incompatible interaction	1.58E-03
39	GO:0008219: cell death	1.58E-03
40	GO:0046470: phosphatidylcholine metabolic process	1.73E-03
41	GO:0043090: amino acid import	1.73E-03
42	GO:0048527: lateral root development	1.82E-03
43	GO:0016559: peroxisome fission	2.00E-03
44	GO:0009787: regulation of abscisic acid-activated signaling pathway	2.00E-03
45	GO:0006875: cellular metal ion homeostasis	2.00E-03
46	GO:0032875: regulation of DNA endoreduplication	2.00E-03
47	GO:0030968: endoplasmic reticulum unfolded protein response	2.28E-03
48	GO:0006887: exocytosis	2.36E-03
49	GO:2000280: regulation of root development	2.88E-03
50	GO:0072593: reactive oxygen species metabolic process	3.53E-03
51	GO:0030148: sphingolipid biosynthetic process	3.53E-03
52	GO:0006886: intracellular protein transport	3.54E-03
53	GO:0000266: mitochondrial fission	3.87E-03
54	GO:0010105: negative regulation of ethylene-activated signaling pathway	3.87E-03
55	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	3.87E-03
56	GO:0009887: animal organ morphogenesis	4.59E-03
57	GO:0010053: root epidermal cell differentiation	4.96E-03
58	GO:0009863: salicylic acid mediated signaling pathway	5.75E-03
59	GO:0048278: vesicle docking	6.56E-03
60	GO:0009845: seed germination	6.58E-03
61	GO:0031348: negative regulation of defense response	6.99E-03
62	GO:0006012: galactose metabolic process	7.42E-03
63	GO:0009625: response to insect	7.42E-03
64	GO:0042127: regulation of cell proliferation	7.87E-03
65	GO:0009306: protein secretion	7.87E-03
66	GO:0015031: protein transport	7.89E-03
67	GO:0042147: retrograde transport, endosome to Golgi	8.32E-03
68	GO:0050832: defense response to fungus	8.59E-03
69	GO:0010118: stomatal movement	8.79E-03
70	GO:0042631: cellular response to water deprivation	8.79E-03
71	GO:0010154: fruit development	9.26E-03
72	GO:0010197: polar nucleus fusion	9.26E-03
73	GO:0010182: sugar mediated signaling pathway	9.26E-03
74	GO:0009646: response to absence of light	9.74E-03
75	GO:0008380: RNA splicing	1.00E-02
76	GO:0006623: protein targeting to vacuole	1.02E-02
77	GO:0009791: post-embryonic development	1.02E-02
78	GO:0009749: response to glucose	1.02E-02
79	GO:0002229: defense response to oomycetes	1.07E-02
80	GO:0000302: response to reactive oxygen species	1.07E-02
81	GO:0006891: intra-Golgi vesicle-mediated transport	1.07E-02
82	GO:0055085: transmembrane transport	1.24E-02
83	GO:0000910: cytokinesis	1.34E-02
84	GO:0009607: response to biotic stimulus	1.45E-02
85	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.45E-02
86	GO:0007049: cell cycle	1.45E-02
87	GO:0006906: vesicle fusion	1.51E-02
88	GO:0009723: response to ethylene	1.51E-02
89	GO:0016049: cell growth	1.62E-02
90	GO:0009737: response to abscisic acid	1.72E-02
91	GO:0006499: N-terminal protein myristoylation	1.80E-02
92	GO:0009407: toxin catabolic process	1.80E-02
93	GO:0010119: regulation of stomatal movement	1.86E-02
94	GO:0006865: amino acid transport	1.92E-02
95	GO:0045087: innate immune response	1.99E-02
96	GO:0006099: tricarboxylic acid cycle	2.05E-02
97	GO:0016310: phosphorylation	2.12E-02
98	GO:0006897: endocytosis	2.25E-02
99	GO:0006979: response to oxidative stress	2.27E-02
100	GO:0051707: response to other organism	2.38E-02
101	GO:0006952: defense response	2.51E-02
102	GO:0009636: response to toxic substance	2.59E-02
103	GO:0048367: shoot system development	3.39E-02
104	GO:0009626: plant-type hypersensitive response	3.47E-02
105	GO:0016569: covalent chromatin modification	3.63E-02
106	GO:0009742: brassinosteroid mediated signaling pathway	3.94E-02
107	GO:0009738: abscisic acid-activated signaling pathway	4.09E-02
108	GO:0000398: mRNA splicing, via spliceosome	4.19E-02
109	GO:0035556: intracellular signal transduction	4.46E-02
110	GO:0051301: cell division	4.60E-02
111	GO:0009790: embryo development	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0004846: urate oxidase activity	0.00E+00
2	GO:0016603: glutaminyl-peptide cyclotransferase activity	0.00E+00
3	GO:0016301: kinase activity	5.07E-07
4	GO:0005524: ATP binding	3.99E-05
5	GO:2001227: quercitrin binding	1.08E-04
6	GO:0015085: calcium ion transmembrane transporter activity	1.08E-04
7	GO:2001147: camalexin binding	1.08E-04
8	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	1.08E-04
9	GO:0004672: protein kinase activity	1.32E-04
10	GO:0004674: protein serine/threonine kinase activity	1.77E-04
11	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.09E-04
12	GO:0005388: calcium-transporting ATPase activity	2.25E-04
13	GO:0038199: ethylene receptor activity	2.52E-04
14	GO:0045140: inositol phosphoceramide synthase activity	2.52E-04
15	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	4.19E-04
16	GO:0008253: 5'-nucleotidase activity	4.19E-04
17	GO:0004148: dihydrolipoyl dehydrogenase activity	4.19E-04
18	GO:0033612: receptor serine/threonine kinase binding	4.33E-04
19	GO:0051740: ethylene binding	6.01E-04
20	GO:0004930: G-protein coupled receptor activity	7.98E-04
21	GO:0004040: amidase activity	1.01E-03
22	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.10E-03
23	GO:0043295: glutathione binding	1.73E-03
24	GO:0050897: cobalt ion binding	1.82E-03
25	GO:0004034: aldose 1-epimerase activity	2.00E-03
26	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.00E-03
27	GO:0004630: phospholipase D activity	2.28E-03
28	GO:0005267: potassium channel activity	2.28E-03
29	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.28E-03
30	GO:0005484: SNAP receptor activity	2.56E-03
31	GO:0004713: protein tyrosine kinase activity	3.20E-03
32	GO:0004673: protein histidine kinase activity	3.20E-03
33	GO:0005516: calmodulin binding	3.50E-03
34	GO:0008559: xenobiotic-transporting ATPase activity	3.53E-03
35	GO:0000175: 3'-5'-exoribonuclease activity	4.23E-03
36	GO:0004022: alcohol dehydrogenase (NAD) activity	4.23E-03
37	GO:0000155: phosphorelay sensor kinase activity	4.23E-03
38	GO:0003924: GTPase activity	4.44E-03
39	GO:0004535: poly(A)-specific ribonuclease activity	4.59E-03
40	GO:0005515: protein binding	4.61E-03
41	GO:0003712: transcription cofactor activity	4.96E-03
42	GO:0016746: transferase activity, transferring acyl groups	5.01E-03
43	GO:0043130: ubiquitin binding	5.75E-03
44	GO:0004540: ribonuclease activity	6.56E-03
45	GO:0008408: 3'-5' exonuclease activity	6.56E-03
46	GO:0008565: protein transporter activity	7.28E-03
47	GO:0016853: isomerase activity	9.74E-03
48	GO:0004872: receptor activity	1.02E-02
49	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.07E-02
50	GO:0016791: phosphatase activity	1.23E-02
51	GO:0004721: phosphoprotein phosphatase activity	1.56E-02
52	GO:0005525: GTP binding	1.73E-02
53	GO:0005096: GTPase activator activity	1.74E-02
54	GO:0030145: manganese ion binding	1.86E-02
55	GO:0004871: signal transducer activity	2.03E-02
56	GO:0005509: calcium ion binding	2.03E-02
57	GO:0000149: SNARE binding	2.12E-02
58	GO:0042393: histone binding	2.18E-02
59	GO:0004364: glutathione transferase activity	2.31E-02
60	GO:0015293: symporter activity	2.59E-02
61	GO:0008270: zinc ion binding	2.96E-02
62	GO:0015171: amino acid transmembrane transporter activity	3.17E-02
63	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.39E-02
64	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.52E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	6.87E-12
2	GO:0045252: oxoglutarate dehydrogenase complex	1.08E-04
3	GO:0030014: CCR4-NOT complex	1.08E-04
4	GO:0005901: caveola	2.52E-04
5	GO:0070062: extracellular exosome	6.01E-04
6	GO:0009898: cytoplasmic side of plasma membrane	7.98E-04
7	GO:0030131: clathrin adaptor complex	2.00E-03
8	GO:0017119: Golgi transport complex	3.20E-03
9	GO:0010008: endosome membrane	4.18E-03
10	GO:0005783: endoplasmic reticulum	4.54E-03
11	GO:0043234: protein complex	5.35E-03
12	GO:0005887: integral component of plasma membrane	6.54E-03
13	GO:0016021: integral component of membrane	6.55E-03
14	GO:0005905: clathrin-coated pit	6.56E-03
15	GO:0009504: cell plate	1.02E-02
16	GO:0019898: extrinsic component of membrane	1.02E-02
17	GO:0005789: endoplasmic reticulum membrane	1.04E-02
18	GO:0000145: exocyst	1.12E-02
19	GO:0000325: plant-type vacuole	1.86E-02
20	GO:0031201: SNARE complex	2.25E-02
21	GO:0031902: late endosome membrane	2.25E-02
22	GO:0005829: cytosol	2.32E-02
23	GO:0005856: cytoskeleton	2.59E-02
24	GO:0000139: Golgi membrane	3.28E-02
25	GO:0005681: spliceosomal complex	3.32E-02
26	GO:0005747: mitochondrial respiratory chain complex I	3.39E-02
27	GO:0016607: nuclear speck	3.39E-02
28	GO:0005834: heterotrimeric G-protein complex	3.47E-02
29	GO:0016020: membrane	3.67E-02
30	GO:0012505: endomembrane system	3.70E-02
31	GO:0009506: plasmodesma	4.37E-02
32	GO:0009524: phragmoplast	4.61E-02
33	GO:0005777: peroxisome	4.84E-02