GO Enrichment Analysis of Co-expressed Genes with
AT3G20250
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010360: negative regulation of anion channel activity | 0.00E+00 |
| 2 | GO:0010793: regulation of mRNA export from nucleus | 0.00E+00 |
| 3 | GO:0010398: xylogalacturonan metabolic process | 0.00E+00 |
| 4 | GO:0032780: negative regulation of ATPase activity | 0.00E+00 |
| 5 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 6 | GO:2001253: regulation of histone H3-K36 trimethylation | 0.00E+00 |
| 7 | GO:0006987: activation of signaling protein activity involved in unfolded protein response | 0.00E+00 |
| 8 | GO:1901017: negative regulation of potassium ion transmembrane transporter activity | 0.00E+00 |
| 9 | GO:0007141: male meiosis I | 0.00E+00 |
| 10 | GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response | 0.00E+00 |
| 11 | GO:0002191: cap-dependent translational initiation | 0.00E+00 |
| 12 | GO:0001676: long-chain fatty acid metabolic process | 1.50E-05 |
| 13 | GO:0016559: peroxisome fission | 1.56E-04 |
| 14 | GO:0006390: transcription from mitochondrial promoter | 1.93E-04 |
| 15 | GO:0048508: embryonic meristem development | 1.93E-04 |
| 16 | GO:1902361: mitochondrial pyruvate transmembrane transport | 1.93E-04 |
| 17 | GO:0030968: endoplasmic reticulum unfolded protein response | 1.95E-04 |
| 18 | GO:0019483: beta-alanine biosynthetic process | 4.33E-04 |
| 19 | GO:0006850: mitochondrial pyruvate transport | 4.33E-04 |
| 20 | GO:0007154: cell communication | 4.33E-04 |
| 21 | GO:0015914: phospholipid transport | 4.33E-04 |
| 22 | GO:0050684: regulation of mRNA processing | 4.33E-04 |
| 23 | GO:0006212: uracil catabolic process | 4.33E-04 |
| 24 | GO:0030010: establishment of cell polarity | 4.33E-04 |
| 25 | GO:0009945: radial axis specification | 4.33E-04 |
| 26 | GO:0052542: defense response by callose deposition | 4.33E-04 |
| 27 | GO:0051258: protein polymerization | 4.33E-04 |
| 28 | GO:0000266: mitochondrial fission | 4.41E-04 |
| 29 | GO:0010150: leaf senescence | 5.57E-04 |
| 30 | GO:0034976: response to endoplasmic reticulum stress | 7.02E-04 |
| 31 | GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening | 7.06E-04 |
| 32 | GO:0032784: regulation of DNA-templated transcription, elongation | 7.06E-04 |
| 33 | GO:0010359: regulation of anion channel activity | 7.06E-04 |
| 34 | GO:0080055: low-affinity nitrate transport | 7.06E-04 |
| 35 | GO:0051176: positive regulation of sulfur metabolic process | 7.06E-04 |
| 36 | GO:0006986: response to unfolded protein | 1.01E-03 |
| 37 | GO:0072583: clathrin-dependent endocytosis | 1.01E-03 |
| 38 | GO:0010188: response to microbial phytotoxin | 1.34E-03 |
| 39 | GO:0033320: UDP-D-xylose biosynthetic process | 1.34E-03 |
| 40 | GO:0042742: defense response to bacterium | 1.45E-03 |
| 41 | GO:0006090: pyruvate metabolic process | 1.70E-03 |
| 42 | GO:0098719: sodium ion import across plasma membrane | 1.70E-03 |
| 43 | GO:0005513: detection of calcium ion | 1.70E-03 |
| 44 | GO:0009697: salicylic acid biosynthetic process | 1.70E-03 |
| 45 | GO:0055114: oxidation-reduction process | 1.99E-03 |
| 46 | GO:1900425: negative regulation of defense response to bacterium | 2.10E-03 |
| 47 | GO:0010337: regulation of salicylic acid metabolic process | 2.10E-03 |
| 48 | GO:0001731: formation of translation preinitiation complex | 2.10E-03 |
| 49 | GO:0048232: male gamete generation | 2.10E-03 |
| 50 | GO:0006555: methionine metabolic process | 2.10E-03 |
| 51 | GO:0070814: hydrogen sulfide biosynthetic process | 2.10E-03 |
| 52 | GO:0042732: D-xylose metabolic process | 2.10E-03 |
| 53 | GO:0009267: cellular response to starvation | 2.10E-03 |
| 54 | GO:1902456: regulation of stomatal opening | 2.10E-03 |
| 55 | GO:0006914: autophagy | 2.24E-03 |
| 56 | GO:0009612: response to mechanical stimulus | 2.52E-03 |
| 57 | GO:0009942: longitudinal axis specification | 2.52E-03 |
| 58 | GO:0010310: regulation of hydrogen peroxide metabolic process | 2.52E-03 |
| 59 | GO:0019509: L-methionine salvage from methylthioadenosine | 2.52E-03 |
| 60 | GO:0000122: negative regulation of transcription from RNA polymerase II promoter | 2.96E-03 |
| 61 | GO:0050790: regulation of catalytic activity | 2.96E-03 |
| 62 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 2.96E-03 |
| 63 | GO:0006955: immune response | 2.96E-03 |
| 64 | GO:0043090: amino acid import | 2.96E-03 |
| 65 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 2.96E-03 |
| 66 | GO:0006605: protein targeting | 3.43E-03 |
| 67 | GO:2000070: regulation of response to water deprivation | 3.43E-03 |
| 68 | GO:0009819: drought recovery | 3.43E-03 |
| 69 | GO:0009642: response to light intensity | 3.43E-03 |
| 70 | GO:0008219: cell death | 3.47E-03 |
| 71 | GO:0043562: cellular response to nitrogen levels | 3.93E-03 |
| 72 | GO:0009880: embryonic pattern specification | 3.93E-03 |
| 73 | GO:0090333: regulation of stomatal closure | 4.44E-03 |
| 74 | GO:0009051: pentose-phosphate shunt, oxidative branch | 4.44E-03 |
| 75 | GO:0009821: alkaloid biosynthetic process | 4.44E-03 |
| 76 | GO:0051453: regulation of intracellular pH | 4.99E-03 |
| 77 | GO:0042761: very long-chain fatty acid biosynthetic process | 4.99E-03 |
| 78 | GO:0006631: fatty acid metabolic process | 5.22E-03 |
| 79 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 5.55E-03 |
| 80 | GO:0000103: sulfate assimilation | 5.55E-03 |
| 81 | GO:0010629: negative regulation of gene expression | 5.55E-03 |
| 82 | GO:0006995: cellular response to nitrogen starvation | 5.55E-03 |
| 83 | GO:0051026: chiasma assembly | 5.55E-03 |
| 84 | GO:0015706: nitrate transport | 6.73E-03 |
| 85 | GO:0006108: malate metabolic process | 7.36E-03 |
| 86 | GO:0010200: response to chitin | 7.87E-03 |
| 87 | GO:0006446: regulation of translational initiation | 8.01E-03 |
| 88 | GO:0046777: protein autophosphorylation | 8.21E-03 |
| 89 | GO:0006351: transcription, DNA-templated | 8.25E-03 |
| 90 | GO:0009225: nucleotide-sugar metabolic process | 8.67E-03 |
| 91 | GO:0045454: cell redox homeostasis | 9.48E-03 |
| 92 | GO:0009626: plant-type hypersensitive response | 9.62E-03 |
| 93 | GO:2000377: regulation of reactive oxygen species metabolic process | 1.01E-02 |
| 94 | GO:0051302: regulation of cell division | 1.08E-02 |
| 95 | GO:0031408: oxylipin biosynthetic process | 1.15E-02 |
| 96 | GO:0006366: transcription from RNA polymerase II promoter | 1.15E-02 |
| 97 | GO:0051260: protein homooligomerization | 1.15E-02 |
| 98 | GO:0061077: chaperone-mediated protein folding | 1.15E-02 |
| 99 | GO:0007131: reciprocal meiotic recombination | 1.23E-02 |
| 100 | GO:0007005: mitochondrion organization | 1.23E-02 |
| 101 | GO:0080092: regulation of pollen tube growth | 1.23E-02 |
| 102 | GO:0016226: iron-sulfur cluster assembly | 1.23E-02 |
| 103 | GO:0001944: vasculature development | 1.31E-02 |
| 104 | GO:0006397: mRNA processing | 1.31E-02 |
| 105 | GO:0008284: positive regulation of cell proliferation | 1.47E-02 |
| 106 | GO:0010501: RNA secondary structure unwinding | 1.55E-02 |
| 107 | GO:0006662: glycerol ether metabolic process | 1.63E-02 |
| 108 | GO:0045489: pectin biosynthetic process | 1.63E-02 |
| 109 | GO:0048544: recognition of pollen | 1.72E-02 |
| 110 | GO:0006814: sodium ion transport | 1.72E-02 |
| 111 | GO:0006623: protein targeting to vacuole | 1.81E-02 |
| 112 | GO:0010183: pollen tube guidance | 1.81E-02 |
| 113 | GO:0000302: response to reactive oxygen species | 1.90E-02 |
| 114 | GO:0071554: cell wall organization or biogenesis | 1.90E-02 |
| 115 | GO:0002229: defense response to oomycetes | 1.90E-02 |
| 116 | GO:0010193: response to ozone | 1.90E-02 |
| 117 | GO:0007264: small GTPase mediated signal transduction | 1.99E-02 |
| 118 | GO:0006470: protein dephosphorylation | 2.16E-02 |
| 119 | GO:0006310: DNA recombination | 2.18E-02 |
| 120 | GO:0008380: RNA splicing | 2.25E-02 |
| 121 | GO:0071805: potassium ion transmembrane transport | 2.27E-02 |
| 122 | GO:0009615: response to virus | 2.47E-02 |
| 123 | GO:0009607: response to biotic stimulus | 2.57E-02 |
| 124 | GO:0009816: defense response to bacterium, incompatible interaction | 2.57E-02 |
| 125 | GO:0042128: nitrate assimilation | 2.67E-02 |
| 126 | GO:0048481: plant ovule development | 2.98E-02 |
| 127 | GO:0045893: positive regulation of transcription, DNA-templated | 3.03E-02 |
| 128 | GO:0009860: pollen tube growth | 3.15E-02 |
| 129 | GO:0006468: protein phosphorylation | 3.16E-02 |
| 130 | GO:0006499: N-terminal protein myristoylation | 3.20E-02 |
| 131 | GO:0007568: aging | 3.31E-02 |
| 132 | GO:0048527: lateral root development | 3.31E-02 |
| 133 | GO:0010119: regulation of stomatal movement | 3.31E-02 |
| 134 | GO:0006865: amino acid transport | 3.42E-02 |
| 135 | GO:0034599: cellular response to oxidative stress | 3.64E-02 |
| 136 | GO:0009651: response to salt stress | 4.19E-02 |
| 137 | GO:0009926: auxin polar transport | 4.23E-02 |
| 138 | GO:0051707: response to other organism | 4.23E-02 |
| 139 | GO:0006260: DNA replication | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004157: dihydropyrimidinase activity | 0.00E+00 |
| 2 | GO:0042030: ATPase inhibitor activity | 0.00E+00 |
| 3 | GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity | 0.00E+00 |
| 4 | GO:0015370: solute:sodium symporter activity | 0.00E+00 |
| 5 | GO:0098808: mRNA cap binding | 0.00E+00 |
| 6 | GO:0000386: second spliceosomal transesterification activity | 1.93E-04 |
| 7 | GO:0032050: clathrin heavy chain binding | 1.93E-04 |
| 8 | GO:0010013: N-1-naphthylphthalamic acid binding | 1.93E-04 |
| 9 | GO:0071949: FAD binding | 2.36E-04 |
| 10 | GO:0051213: dioxygenase activity | 2.76E-04 |
| 11 | GO:0001078: transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 4.33E-04 |
| 12 | GO:0004781: sulfate adenylyltransferase (ATP) activity | 7.06E-04 |
| 13 | GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity | 7.06E-04 |
| 14 | GO:0052692: raffinose alpha-galactosidase activity | 7.06E-04 |
| 15 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 7.06E-04 |
| 16 | GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity | 7.06E-04 |
| 17 | GO:0005047: signal recognition particle binding | 7.06E-04 |
| 18 | GO:0004557: alpha-galactosidase activity | 7.06E-04 |
| 19 | GO:0050833: pyruvate transmembrane transporter activity | 7.06E-04 |
| 20 | GO:0015293: symporter activity | 8.48E-04 |
| 21 | GO:0031176: endo-1,4-beta-xylanase activity | 1.01E-03 |
| 22 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.06E-03 |
| 23 | GO:0047134: protein-disulfide reductase activity | 1.30E-03 |
| 24 | GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor | 1.34E-03 |
| 25 | GO:0015204: urea transmembrane transporter activity | 1.34E-03 |
| 26 | GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity | 1.34E-03 |
| 27 | GO:0004470: malic enzyme activity | 1.34E-03 |
| 28 | GO:0004791: thioredoxin-disulfide reductase activity | 1.62E-03 |
| 29 | GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 1.70E-03 |
| 30 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 1.70E-03 |
| 31 | GO:0008948: oxaloacetate decarboxylase activity | 1.70E-03 |
| 32 | GO:0035252: UDP-xylosyltransferase activity | 2.10E-03 |
| 33 | GO:0048040: UDP-glucuronate decarboxylase activity | 2.10E-03 |
| 34 | GO:0031593: polyubiquitin binding | 2.10E-03 |
| 35 | GO:0004722: protein serine/threonine phosphatase activity | 2.25E-03 |
| 36 | GO:0070403: NAD+ binding | 2.52E-03 |
| 37 | GO:0102391: decanoate--CoA ligase activity | 2.52E-03 |
| 38 | GO:0004467: long-chain fatty acid-CoA ligase activity | 2.96E-03 |
| 39 | GO:0046872: metal ion binding | 3.73E-03 |
| 40 | GO:0004674: protein serine/threonine kinase activity | 4.60E-03 |
| 41 | GO:0016844: strictosidine synthase activity | 4.99E-03 |
| 42 | GO:0005524: ATP binding | 5.17E-03 |
| 43 | GO:0008047: enzyme activator activity | 5.55E-03 |
| 44 | GO:0004713: protein tyrosine kinase activity | 5.55E-03 |
| 45 | GO:0001054: RNA polymerase I activity | 6.13E-03 |
| 46 | GO:0004177: aminopeptidase activity | 6.13E-03 |
| 47 | GO:0015386: potassium:proton antiporter activity | 6.13E-03 |
| 48 | GO:0004521: endoribonuclease activity | 6.73E-03 |
| 49 | GO:0004022: alcohol dehydrogenase (NAD) activity | 7.36E-03 |
| 50 | GO:0000175: 3'-5'-exoribonuclease activity | 7.36E-03 |
| 51 | GO:0004497: monooxygenase activity | 7.54E-03 |
| 52 | GO:0004535: poly(A)-specific ribonuclease activity | 8.01E-03 |
| 53 | GO:0043130: ubiquitin binding | 1.01E-02 |
| 54 | GO:0005528: FK506 binding | 1.01E-02 |
| 55 | GO:0008408: 3'-5' exonuclease activity | 1.15E-02 |
| 56 | GO:0008026: ATP-dependent helicase activity | 1.15E-02 |
| 57 | GO:0004540: ribonuclease activity | 1.15E-02 |
| 58 | GO:0005516: calmodulin binding | 1.19E-02 |
| 59 | GO:0003727: single-stranded RNA binding | 1.39E-02 |
| 60 | GO:0003756: protein disulfide isomerase activity | 1.39E-02 |
| 61 | GO:0016301: kinase activity | 1.62E-02 |
| 62 | GO:0016853: isomerase activity | 1.72E-02 |
| 63 | GO:0004872: receptor activity | 1.81E-02 |
| 64 | GO:0004197: cysteine-type endopeptidase activity | 1.99E-02 |
| 65 | GO:0015385: sodium:proton antiporter activity | 2.08E-02 |
| 66 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.08E-02 |
| 67 | GO:0016791: phosphatase activity | 2.18E-02 |
| 68 | GO:0008483: transaminase activity | 2.27E-02 |
| 69 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 2.27E-02 |
| 70 | GO:0016413: O-acetyltransferase activity | 2.37E-02 |
| 71 | GO:0016597: amino acid binding | 2.37E-02 |
| 72 | GO:0008375: acetylglucosaminyltransferase activity | 2.67E-02 |
| 73 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 2.67E-02 |
| 74 | GO:0004721: phosphoprotein phosphatase activity | 2.77E-02 |
| 75 | GO:0004004: ATP-dependent RNA helicase activity | 2.77E-02 |
| 76 | GO:0004683: calmodulin-dependent protein kinase activity | 2.77E-02 |
| 77 | GO:0004806: triglyceride lipase activity | 2.77E-02 |
| 78 | GO:0016491: oxidoreductase activity | 2.80E-02 |
| 79 | GO:0008236: serine-type peptidase activity | 2.88E-02 |
| 80 | GO:0005096: GTPase activator activity | 3.09E-02 |
| 81 | GO:0043531: ADP binding | 3.20E-02 |
| 82 | GO:0030145: manganese ion binding | 3.31E-02 |
| 83 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 3.53E-02 |
| 84 | GO:0003993: acid phosphatase activity | 3.64E-02 |
| 85 | GO:0030246: carbohydrate binding | 3.69E-02 |
| 86 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 3.76E-02 |
| 87 | GO:0004364: glutathione transferase activity | 4.11E-02 |
| 88 | GO:0005198: structural molecule activity | 4.59E-02 |
| 89 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.71E-02 |
| 90 | GO:0051287: NAD binding | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005785: signal recognition particle receptor complex | 0.00E+00 |
| 2 | GO:0019034: viral replication complex | 0.00E+00 |
| 3 | GO:0005783: endoplasmic reticulum | 5.24E-05 |
| 4 | GO:0030014: CCR4-NOT complex | 1.93E-04 |
| 5 | GO:0034245: mitochondrial DNA-directed RNA polymerase complex | 1.93E-04 |
| 6 | GO:0005778: peroxisomal membrane | 2.36E-04 |
| 7 | GO:0042406: extrinsic component of endoplasmic reticulum membrane | 7.06E-04 |
| 8 | GO:0005741: mitochondrial outer membrane | 9.35E-04 |
| 9 | GO:0016021: integral component of membrane | 1.19E-03 |
| 10 | GO:0005886: plasma membrane | 1.19E-03 |
| 11 | GO:0016282: eukaryotic 43S preinitiation complex | 2.10E-03 |
| 12 | GO:0033290: eukaryotic 48S preinitiation complex | 2.52E-03 |
| 13 | GO:0031305: integral component of mitochondrial inner membrane | 3.43E-03 |
| 14 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 3.93E-03 |
| 15 | GO:0005768: endosome | 4.43E-03 |
| 16 | GO:0005736: DNA-directed RNA polymerase I complex | 4.44E-03 |
| 17 | GO:0017119: Golgi transport complex | 5.55E-03 |
| 18 | GO:0030125: clathrin vesicle coat | 5.55E-03 |
| 19 | GO:0048471: perinuclear region of cytoplasm | 6.13E-03 |
| 20 | GO:0016602: CCAAT-binding factor complex | 7.36E-03 |
| 21 | GO:0005777: peroxisome | 7.93E-03 |
| 22 | GO:0005764: lysosome | 8.01E-03 |
| 23 | GO:0005794: Golgi apparatus | 8.70E-03 |
| 24 | GO:0043234: protein complex | 9.35E-03 |
| 25 | GO:0005829: cytosol | 9.83E-03 |
| 26 | GO:0012505: endomembrane system | 1.06E-02 |
| 27 | GO:0005789: endoplasmic reticulum membrane | 1.11E-02 |
| 28 | GO:0005802: trans-Golgi network | 1.31E-02 |
| 29 | GO:0016020: membrane | 1.36E-02 |
| 30 | GO:0000790: nuclear chromatin | 1.47E-02 |
| 31 | GO:0032580: Golgi cisterna membrane | 2.18E-02 |
| 32 | GO:0005788: endoplasmic reticulum lumen | 2.57E-02 |
| 33 | GO:0031902: late endosome membrane | 3.99E-02 |