GO Enrichment Analysis of Co-expressed Genes with
AT3G19900
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098586: cellular response to virus | 0.00E+00 |
| 2 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 3 | GO:0034599: cellular response to oxidative stress | 5.03E-06 |
| 4 | GO:0046741: transport of virus in host, tissue to tissue | 4.61E-05 |
| 5 | GO:0071457: cellular response to ozone | 4.61E-05 |
| 6 | GO:0080005: photosystem stoichiometry adjustment | 4.61E-05 |
| 7 | GO:0006662: glycerol ether metabolic process | 6.25E-05 |
| 8 | GO:0000302: response to reactive oxygen species | 7.95E-05 |
| 9 | GO:0006954: inflammatory response | 8.18E-05 |
| 10 | GO:0043572: plastid fission | 1.23E-04 |
| 11 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.23E-04 |
| 12 | GO:0071484: cellular response to light intensity | 1.23E-04 |
| 13 | GO:0009152: purine ribonucleotide biosynthetic process | 1.23E-04 |
| 14 | GO:0046653: tetrahydrofolate metabolic process | 1.23E-04 |
| 15 | GO:0010021: amylopectin biosynthetic process | 1.69E-04 |
| 16 | GO:0071486: cellular response to high light intensity | 1.69E-04 |
| 17 | GO:0006109: regulation of carbohydrate metabolic process | 1.69E-04 |
| 18 | GO:0071493: cellular response to UV-B | 2.19E-04 |
| 19 | GO:0010190: cytochrome b6f complex assembly | 2.72E-04 |
| 20 | GO:0006400: tRNA modification | 3.84E-04 |
| 21 | GO:0009231: riboflavin biosynthetic process | 4.43E-04 |
| 22 | GO:0005978: glycogen biosynthetic process | 4.43E-04 |
| 23 | GO:0009642: response to light intensity | 4.43E-04 |
| 24 | GO:0019430: removal of superoxide radicals | 5.05E-04 |
| 25 | GO:0055114: oxidation-reduction process | 5.51E-04 |
| 26 | GO:0000373: Group II intron splicing | 5.68E-04 |
| 27 | GO:0098656: anion transmembrane transport | 5.68E-04 |
| 28 | GO:0006098: pentose-phosphate shunt | 5.68E-04 |
| 29 | GO:0005982: starch metabolic process | 6.32E-04 |
| 30 | GO:0009773: photosynthetic electron transport in photosystem I | 7.68E-04 |
| 31 | GO:0043085: positive regulation of catalytic activity | 7.68E-04 |
| 32 | GO:0009451: RNA modification | 8.79E-04 |
| 33 | GO:0010628: positive regulation of gene expression | 9.08E-04 |
| 34 | GO:0006094: gluconeogenesis | 9.08E-04 |
| 35 | GO:0010020: chloroplast fission | 9.82E-04 |
| 36 | GO:0051302: regulation of cell division | 1.29E-03 |
| 37 | GO:0010431: seed maturation | 1.37E-03 |
| 38 | GO:0016226: iron-sulfur cluster assembly | 1.46E-03 |
| 39 | GO:0071472: cellular response to salt stress | 1.90E-03 |
| 40 | GO:0045454: cell redox homeostasis | 1.91E-03 |
| 41 | GO:0019252: starch biosynthetic process | 2.09E-03 |
| 42 | GO:0001666: response to hypoxia | 2.80E-03 |
| 43 | GO:0009853: photorespiration | 3.94E-03 |
| 44 | GO:0051707: response to other organism | 4.68E-03 |
| 45 | GO:0006096: glycolytic process | 6.45E-03 |
| 46 | GO:0043086: negative regulation of catalytic activity | 6.45E-03 |
| 47 | GO:0006979: response to oxidative stress | 8.37E-03 |
| 48 | GO:0009058: biosynthetic process | 8.90E-03 |
| 49 | GO:0009845: seed germination | 9.06E-03 |
| 50 | GO:0042744: hydrogen peroxide catabolic process | 9.39E-03 |
| 51 | GO:0010468: regulation of gene expression | 1.22E-02 |
| 52 | GO:0007049: cell cycle | 1.58E-02 |
| 53 | GO:0046777: protein autophosphorylation | 1.79E-02 |
| 54 | GO:0006397: mRNA processing | 2.32E-02 |
| 55 | GO:0051301: cell division | 3.60E-02 |
| 56 | GO:0006511: ubiquitin-dependent protein catabolic process | 4.21E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | 4.61E-05 |
| 2 | GO:0004047: aminomethyltransferase activity | 4.61E-05 |
| 3 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 4.61E-05 |
| 4 | GO:0047134: protein-disulfide reductase activity | 5.23E-05 |
| 5 | GO:0004791: thioredoxin-disulfide reductase activity | 6.79E-05 |
| 6 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 8.18E-05 |
| 7 | GO:0008864: formyltetrahydrofolate deformylase activity | 8.18E-05 |
| 8 | GO:0043169: cation binding | 8.18E-05 |
| 9 | GO:0003935: GTP cyclohydrolase II activity | 8.18E-05 |
| 10 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 9.22E-05 |
| 11 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.69E-04 |
| 12 | GO:0016688: L-ascorbate peroxidase activity | 2.72E-04 |
| 13 | GO:0004332: fructose-bisphosphate aldolase activity | 2.72E-04 |
| 14 | GO:0004130: cytochrome-c peroxidase activity | 2.72E-04 |
| 15 | GO:0004784: superoxide dismutase activity | 2.72E-04 |
| 16 | GO:0015035: protein disulfide oxidoreductase activity | 5.25E-04 |
| 17 | GO:0008047: enzyme activator activity | 6.99E-04 |
| 18 | GO:0005315: inorganic phosphate transmembrane transporter activity | 9.08E-04 |
| 19 | GO:0004857: enzyme inhibitor activity | 1.21E-03 |
| 20 | GO:0016491: oxidoreductase activity | 1.63E-03 |
| 21 | GO:0048038: quinone binding | 2.19E-03 |
| 22 | GO:0004519: endonuclease activity | 2.54E-03 |
| 23 | GO:0008483: transaminase activity | 2.60E-03 |
| 24 | GO:0031625: ubiquitin protein ligase binding | 6.17E-03 |
| 25 | GO:0016829: lyase activity | 9.06E-03 |
| 26 | GO:0030170: pyridoxal phosphate binding | 9.23E-03 |
| 27 | GO:0020037: heme binding | 1.31E-02 |
| 28 | GO:0004601: peroxidase activity | 1.46E-02 |
| 29 | GO:0003723: RNA binding | 1.55E-02 |
| 30 | GO:0061630: ubiquitin protein ligase activity | 1.77E-02 |
| 31 | GO:0016740: transferase activity | 3.90E-02 |
| 32 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 4.13E-02 |
| 33 | GO:0030246: carbohydrate binding | 4.18E-02 |
| 34 | GO:0005507: copper ion binding | 4.36E-02 |
| 35 | GO:0005525: GTP binding | 4.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 6.26E-09 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 4.63E-06 |
| 3 | GO:0009534: chloroplast thylakoid | 5.51E-05 |
| 4 | GO:0009501: amyloplast | 4.43E-04 |
| 5 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 5.68E-04 |
| 6 | GO:0043231: intracellular membrane-bounded organelle | 2.57E-03 |
| 7 | GO:0009570: chloroplast stroma | 2.61E-03 |
| 8 | GO:0030529: intracellular ribonucleoprotein complex | 2.80E-03 |
| 9 | GO:0009707: chloroplast outer membrane | 3.36E-03 |
| 10 | GO:0031977: thylakoid lumen | 4.43E-03 |
| 11 | GO:0009543: chloroplast thylakoid lumen | 8.58E-03 |
| 12 | GO:0005623: cell | 8.74E-03 |
| 13 | GO:0031969: chloroplast membrane | 1.70E-02 |
| 14 | GO:0005777: peroxisome | 3.74E-02 |
| 15 | GO:0009579: thylakoid | 3.85E-02 |