co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G19850

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045176: apical protein localization	0.00E+00
2	GO:0016553: base conversion or substitution editing	0.00E+00
3	GO:0042493: response to drug	0.00E+00
4	GO:0002184: cytoplasmic translational termination	0.00E+00
5	GO:1901698: response to nitrogen compound	0.00E+00
6	GO:0042335: cuticle development	1.15E-05
7	GO:0006633: fatty acid biosynthetic process	3.99E-05
8	GO:0043489: RNA stabilization	6.74E-05
9	GO:0000481: maturation of 5S rRNA	6.74E-05
10	GO:0042371: vitamin K biosynthetic process	6.74E-05
11	GO:0034337: RNA folding	6.74E-05
12	GO:0034757: negative regulation of iron ion transport	6.74E-05
13	GO:0000038: very long-chain fatty acid metabolic process	8.50E-05
14	GO:0010271: regulation of chlorophyll catabolic process	1.62E-04
15	GO:0080117: secondary growth	2.75E-04
16	GO:0006518: peptide metabolic process	2.75E-04
17	GO:2001295: malonyl-CoA biosynthetic process	2.75E-04
18	GO:0071705: nitrogen compound transport	2.75E-04
19	GO:0009650: UV protection	3.98E-04
20	GO:0071249: cellular response to nitrate	5.32E-04
21	GO:0009735: response to cytokinin	6.33E-04
22	GO:0006564: L-serine biosynthetic process	6.73E-04
23	GO:0009416: response to light stimulus	7.25E-04
24	GO:0048831: regulation of shoot system development	8.23E-04
25	GO:0010190: cytochrome b6f complex assembly	8.23E-04
26	GO:0048827: phyllome development	8.23E-04
27	GO:0009913: epidermal cell differentiation	8.23E-04
28	GO:0048509: regulation of meristem development	9.79E-04
29	GO:0030497: fatty acid elongation	1.14E-03
30	GO:0030091: protein repair	1.32E-03
31	GO:0032508: DNA duplex unwinding	1.32E-03
32	GO:0008610: lipid biosynthetic process	1.32E-03
33	GO:0046620: regulation of organ growth	1.32E-03
34	GO:0009926: auxin polar transport	1.38E-03
35	GO:0032544: plastid translation	1.50E-03
36	GO:0007389: pattern specification process	1.50E-03
37	GO:0009636: response to toxic substance	1.55E-03
38	GO:0010206: photosystem II repair	1.69E-03
39	GO:0009051: pentose-phosphate shunt, oxidative branch	1.69E-03
40	GO:0009638: phototropism	1.89E-03
41	GO:0009870: defense response signaling pathway, resistance gene-dependent	2.10E-03
42	GO:0043069: negative regulation of programmed cell death	2.10E-03
43	GO:0019684: photosynthesis, light reaction	2.31E-03
44	GO:0009089: lysine biosynthetic process via diaminopimelate	2.31E-03
45	GO:0009684: indoleacetic acid biosynthetic process	2.31E-03
46	GO:0015706: nitrate transport	2.53E-03
47	GO:0006006: glucose metabolic process	2.76E-03
48	GO:0010229: inflorescence development	2.76E-03
49	GO:0010540: basipetal auxin transport	2.99E-03
50	GO:0010167: response to nitrate	3.23E-03
51	GO:0009409: response to cold	3.31E-03
52	GO:0010025: wax biosynthetic process	3.48E-03
53	GO:0006833: water transport	3.48E-03
54	GO:0009411: response to UV	4.81E-03
55	GO:0071215: cellular response to abscisic acid stimulus	4.81E-03
56	GO:0009306: protein secretion	5.09E-03
57	GO:0006284: base-excision repair	5.09E-03
58	GO:0070417: cellular response to cold	5.38E-03
59	GO:0034220: ion transmembrane transport	5.68E-03
60	GO:0010087: phloem or xylem histogenesis	5.68E-03
61	GO:0007165: signal transduction	6.35E-03
62	GO:0048825: cotyledon development	6.60E-03
63	GO:0016132: brassinosteroid biosynthetic process	6.91E-03
64	GO:0071554: cell wall organization or biogenesis	6.91E-03
65	GO:0006412: translation	7.50E-03
66	GO:0010252: auxin homeostasis	7.90E-03
67	GO:0010027: thylakoid membrane organization	8.93E-03
68	GO:0016126: sterol biosynthetic process	8.93E-03
69	GO:0009911: positive regulation of flower development	8.93E-03
70	GO:0010029: regulation of seed germination	9.29E-03
71	GO:0009817: defense response to fungus, incompatible interaction	1.08E-02
72	GO:0000160: phosphorelay signal transduction system	1.11E-02
73	GO:0006869: lipid transport	1.13E-02
74	GO:0009407: toxin catabolic process	1.15E-02
75	GO:0009631: cold acclimation	1.19E-02
76	GO:0045087: innate immune response	1.27E-02
77	GO:0006281: DNA repair	1.27E-02
78	GO:0030001: metal ion transport	1.39E-02
79	GO:0006631: fatty acid metabolic process	1.44E-02
80	GO:0006855: drug transmembrane transport	1.70E-02
81	GO:0009736: cytokinin-activated signaling pathway	1.88E-02
82	GO:0009585: red, far-red light phototransduction	1.88E-02
83	GO:0009909: regulation of flower development	2.02E-02
84	GO:0006396: RNA processing	2.47E-02
85	GO:0055114: oxidation-reduction process	2.62E-02
86	GO:0055085: transmembrane transport	2.86E-02
87	GO:0009790: embryo development	3.17E-02
88	GO:0009451: RNA modification	3.63E-02
89	GO:0009414: response to water deprivation	4.44E-02
90	GO:0071555: cell wall organization	4.55E-02
91	GO:0009826: unidimensional cell growth	4.73E-02
92	GO:0009658: chloroplast organization	4.86E-02
93	GO:0042254: ribosome biogenesis	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0043864: indoleacetamide hydrolase activity	0.00E+00
2	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
3	GO:0000248: C-5 sterol desaturase activity	6.74E-05
4	GO:0080132: fatty acid alpha-hydroxylase activity	6.74E-05
5	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	1.62E-04
6	GO:0004617: phosphoglycerate dehydrogenase activity	1.62E-04
7	GO:0009884: cytokinin receptor activity	1.62E-04
8	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.68E-04
9	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.68E-04
10	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.68E-04
11	GO:0005528: FK506 binding	1.88E-04
12	GO:0004075: biotin carboxylase activity	2.75E-04
13	GO:0030267: glyoxylate reductase (NADP) activity	2.75E-04
14	GO:0005034: osmosensor activity	2.75E-04
15	GO:0019843: rRNA binding	3.63E-04
16	GO:0043023: ribosomal large subunit binding	3.98E-04
17	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	5.32E-04
18	GO:0004345: glucose-6-phosphate dehydrogenase activity	5.32E-04
19	GO:0052793: pectin acetylesterase activity	5.32E-04
20	GO:0003989: acetyl-CoA carboxylase activity	6.73E-04
21	GO:0008725: DNA-3-methyladenine glycosylase activity	6.73E-04
22	GO:0009922: fatty acid elongase activity	6.73E-04
23	GO:0004040: amidase activity	6.73E-04
24	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	9.79E-04
25	GO:0019900: kinase binding	9.79E-04
26	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	9.79E-04
27	GO:0052689: carboxylic ester hydrolase activity	1.39E-03
28	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.60E-03
29	GO:0009672: auxin:proton symporter activity	1.89E-03
30	GO:0004673: protein histidine kinase activity	2.10E-03
31	GO:0016746: transferase activity, transferring acyl groups	2.69E-03
32	GO:0000155: phosphorelay sensor kinase activity	2.76E-03
33	GO:0004565: beta-galactosidase activity	2.76E-03
34	GO:0010329: auxin efflux transmembrane transporter activity	2.76E-03
35	GO:0008266: poly(U) RNA binding	2.99E-03
36	GO:0043424: protein histidine kinase binding	3.99E-03
37	GO:0003735: structural constituent of ribosome	5.93E-03
38	GO:0016413: O-acetyltransferase activity	8.59E-03
39	GO:0016597: amino acid binding	8.59E-03
40	GO:0015250: water channel activity	8.93E-03
41	GO:0008236: serine-type peptidase activity	1.04E-02
42	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.08E-02
43	GO:0004871: signal transducer activity	1.08E-02
44	GO:0015238: drug transmembrane transporter activity	1.11E-02
45	GO:0005215: transporter activity	1.14E-02
46	GO:0004222: metalloendopeptidase activity	1.15E-02
47	GO:0003993: acid phosphatase activity	1.31E-02
48	GO:0050661: NADP binding	1.39E-02
49	GO:0016491: oxidoreductase activity	1.43E-02
50	GO:0004364: glutathione transferase activity	1.48E-02
51	GO:0035091: phosphatidylinositol binding	1.61E-02
52	GO:0003729: mRNA binding	1.67E-02
53	GO:0051287: NAD binding	1.74E-02
54	GO:0008289: lipid binding	1.77E-02
55	GO:0003777: microtubule motor activity	2.02E-02
56	GO:0016787: hydrolase activity	2.64E-02
57	GO:0004252: serine-type endopeptidase activity	3.05E-02
58	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.39E-02
59	GO:0015297: antiporter activity	3.45E-02
60	GO:0008017: microtubule binding	3.68E-02
61	GO:0042802: identical protein binding	4.23E-02
62	GO:0005506: iron ion binding	4.48E-02
63	GO:0016788: hydrolase activity, acting on ester bonds	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0009570: chloroplast stroma	1.06E-09
2	GO:0009507: chloroplast	1.87E-09
3	GO:0009535: chloroplast thylakoid membrane	9.35E-06
4	GO:0009941: chloroplast envelope	1.68E-05
5	GO:0009579: thylakoid	1.52E-04
6	GO:0009543: chloroplast thylakoid lumen	3.63E-04
7	GO:0005789: endoplasmic reticulum membrane	8.82E-04
8	GO:0031977: thylakoid lumen	1.28E-03
9	GO:0032040: small-subunit processome	2.53E-03
10	GO:0005770: late endosome	5.98E-03
11	GO:0016020: membrane	6.67E-03
12	GO:0030529: intracellular ribonucleoprotein complex	8.93E-03
13	GO:0005840: ribosome	1.07E-02
14	GO:0015934: large ribosomal subunit	1.19E-02
15	GO:0009505: plant-type cell wall	1.34E-02
16	GO:0005819: spindle	1.35E-02
17	GO:0005886: plasma membrane	2.12E-02
18	GO:0022626: cytosolic ribosome	2.16E-02
19	GO:0016021: integral component of membrane	2.20E-02
20	GO:0009534: chloroplast thylakoid	2.73E-02
21	GO:0031225: anchored component of membrane	3.52E-02
22	GO:0005783: endoplasmic reticulum	3.86E-02
23	GO:0046658: anchored component of plasma membrane	4.35E-02