GO Enrichment Analysis of Co-expressed Genes with
AT3G18600
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090069: regulation of ribosome biogenesis | 0.00E+00 |
| 2 | GO:0042430: indole-containing compound metabolic process | 0.00E+00 |
| 3 | GO:0006364: rRNA processing | 4.84E-07 |
| 4 | GO:0010162: seed dormancy process | 1.61E-05 |
| 5 | GO:2000232: regulation of rRNA processing | 2.53E-05 |
| 6 | GO:0009553: embryo sac development | 4.13E-05 |
| 7 | GO:0009944: polarity specification of adaxial/abaxial axis | 4.64E-05 |
| 8 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 6.44E-05 |
| 9 | GO:0010155: regulation of proton transport | 6.44E-05 |
| 10 | GO:0009294: DNA mediated transformation | 7.16E-05 |
| 11 | GO:0010197: polar nucleus fusion | 1.03E-04 |
| 12 | GO:0045039: protein import into mitochondrial inner membrane | 1.13E-04 |
| 13 | GO:0009855: determination of bilateral symmetry | 1.69E-04 |
| 14 | GO:0042273: ribosomal large subunit biogenesis | 2.30E-04 |
| 15 | GO:0051205: protein insertion into membrane | 2.30E-04 |
| 16 | GO:1900864: mitochondrial RNA modification | 2.30E-04 |
| 17 | GO:0031365: N-terminal protein amino acid modification | 2.95E-04 |
| 18 | GO:0006461: protein complex assembly | 2.95E-04 |
| 19 | GO:0016554: cytidine to uridine editing | 3.65E-04 |
| 20 | GO:0000741: karyogamy | 3.65E-04 |
| 21 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 4.36E-04 |
| 22 | GO:0080186: developmental vegetative growth | 5.11E-04 |
| 23 | GO:0000028: ribosomal small subunit assembly | 5.89E-04 |
| 24 | GO:0007338: single fertilization | 7.52E-04 |
| 25 | GO:1900865: chloroplast RNA modification | 8.38E-04 |
| 26 | GO:0016485: protein processing | 1.01E-03 |
| 27 | GO:0009451: RNA modification | 1.33E-03 |
| 28 | GO:0000027: ribosomal large subunit assembly | 1.61E-03 |
| 29 | GO:0006334: nucleosome assembly | 1.83E-03 |
| 30 | GO:0009960: endosperm development | 2.55E-03 |
| 31 | GO:0080156: mitochondrial mRNA modification | 2.94E-03 |
| 32 | GO:0009567: double fertilization forming a zygote and endosperm | 3.34E-03 |
| 33 | GO:0000154: rRNA modification | 6.85E-03 |
| 34 | GO:0016569: covalent chromatin modification | 9.54E-03 |
| 35 | GO:0042254: ribosome biogenesis | 2.02E-02 |
| 36 | GO:0044550: secondary metabolite biosynthetic process | 2.47E-02 |
| 37 | GO:0045892: negative regulation of transcription, DNA-templated | 2.67E-02 |
| 38 | GO:0009555: pollen development | 4.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030515: snoRNA binding | 1.29E-08 |
| 2 | GO:0001054: RNA polymerase I activity | 1.94E-05 |
| 3 | GO:0042134: rRNA primary transcript binding | 2.53E-05 |
| 4 | GO:0004407: histone deacetylase activity | 4.64E-05 |
| 5 | GO:0004557: alpha-galactosidase activity | 1.13E-04 |
| 6 | GO:0052692: raffinose alpha-galactosidase activity | 1.13E-04 |
| 7 | GO:0050897: cobalt ion binding | 2.94E-04 |
| 8 | GO:0003746: translation elongation factor activity | 3.23E-04 |
| 9 | GO:0008235: metalloexopeptidase activity | 5.11E-04 |
| 10 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 5.54E-04 |
| 11 | GO:0001055: RNA polymerase II activity | 8.38E-04 |
| 12 | GO:0004177: aminopeptidase activity | 1.01E-03 |
| 13 | GO:0001056: RNA polymerase III activity | 1.11E-03 |
| 14 | GO:0003723: RNA binding | 1.58E-03 |
| 15 | GO:0005528: FK506 binding | 1.61E-03 |
| 16 | GO:0003713: transcription coactivator activity | 2.55E-03 |
| 17 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 4.52E-03 |
| 18 | GO:0042393: histone binding | 5.81E-03 |
| 19 | GO:0000166: nucleotide binding | 6.37E-03 |
| 20 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 7.04E-03 |
| 21 | GO:0005525: GTP binding | 1.05E-02 |
| 22 | GO:0019843: rRNA binding | 1.17E-02 |
| 23 | GO:0003729: mRNA binding | 1.93E-02 |
| 24 | GO:0004497: monooxygenase activity | 2.32E-02 |
| 25 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 2.79E-02 |
| 26 | GO:0003924: GTPase activity | 3.07E-02 |
| 27 | GO:0004519: endonuclease activity | 3.26E-02 |
| 28 | GO:0016887: ATPase activity | 4.19E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034457: Mpp10 complex | 0.00E+00 |
| 2 | GO:0005730: nucleolus | 7.94E-13 |
| 3 | GO:0032040: small-subunit processome | 1.40E-07 |
| 4 | GO:0005736: DNA-directed RNA polymerase I complex | 1.06E-05 |
| 5 | GO:0034388: Pwp2p-containing subcomplex of 90S preribosome | 2.53E-05 |
| 6 | GO:0070545: PeBoW complex | 6.44E-05 |
| 7 | GO:0031428: box C/D snoRNP complex | 3.65E-04 |
| 8 | GO:0016363: nuclear matrix | 4.36E-04 |
| 9 | GO:0005666: DNA-directed RNA polymerase III complex | 8.38E-04 |
| 10 | GO:0015030: Cajal body | 8.38E-04 |
| 11 | GO:0005739: mitochondrion | 9.14E-04 |
| 12 | GO:0000418: DNA-directed RNA polymerase IV complex | 9.24E-04 |
| 13 | GO:0005665: DNA-directed RNA polymerase II, core complex | 1.11E-03 |
| 14 | GO:0019013: viral nucleocapsid | 1.20E-03 |
| 15 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.18E-03 |
| 16 | GO:0005618: cell wall | 2.41E-03 |
| 17 | GO:0005834: heterotrimeric G-protein complex | 9.13E-03 |
| 18 | GO:0005732: small nucleolar ribonucleoprotein complex | 1.06E-02 |
| 19 | GO:0005654: nucleoplasm | 1.14E-02 |
| 20 | GO:0005759: mitochondrial matrix | 1.37E-02 |
| 21 | GO:0005634: nucleus | 2.05E-02 |
| 22 | GO:0005743: mitochondrial inner membrane | 2.91E-02 |