Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G18270

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0019484: beta-alanine catabolic process0.00E+00
2GO:0009448: gamma-aminobutyric acid metabolic process0.00E+00
3GO:0006105: succinate metabolic process0.00E+00
4GO:0009865: pollen tube adhesion2.76E-05
5GO:0006540: glutamate decarboxylation to succinate2.76E-05
6GO:0009450: gamma-aminobutyric acid catabolic process2.76E-05
7GO:0010184: cytokinin transport2.76E-05
8GO:0006979: response to oxidative stress3.83E-05
9GO:0010163: high-affinity potassium ion import7.01E-05
10GO:0001736: establishment of planar polarity7.01E-05
11GO:0010033: response to organic substance7.01E-05
12GO:0010150: leaf senescence1.16E-04
13GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway1.23E-04
14GO:0006882: cellular zinc ion homeostasis1.83E-04
15GO:0006624: vacuolar protein processing1.83E-04
16GO:0006020: inositol metabolic process1.83E-04
17GO:0006878: cellular copper ion homeostasis2.48E-04
18GO:0015743: malate transport2.48E-04
19GO:0006536: glutamate metabolic process2.48E-04
20GO:0045723: positive regulation of fatty acid biosynthetic process2.48E-04
21GO:0009723: response to ethylene2.61E-04
22GO:0098719: sodium ion import across plasma membrane3.18E-04
23GO:0043097: pyrimidine nucleoside salvage3.18E-04
24GO:0010119: regulation of stomatal movement3.29E-04
25GO:0006206: pyrimidine nucleobase metabolic process3.92E-04
26GO:0009651: response to salt stress4.41E-04
27GO:0042542: response to hydrogen peroxide4.45E-04
28GO:0006333: chromatin assembly or disassembly5.49E-04
29GO:0098869: cellular oxidant detoxification5.49E-04
30GO:0001510: RNA methylation7.18E-04
31GO:0051453: regulation of intracellular pH8.99E-04
32GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway8.99E-04
33GO:0031627: telomeric loop formation9.92E-04
34GO:0048765: root hair cell differentiation1.09E-03
35GO:0052544: defense response by callose deposition in cell wall1.09E-03
36GO:0009058: biosynthetic process1.12E-03
37GO:0009725: response to hormone1.29E-03
38GO:0010102: lateral root morphogenesis1.29E-03
39GO:0006446: regulation of translational initiation1.40E-03
40GO:0006541: glutamine metabolic process1.40E-03
41GO:0002237: response to molecule of bacterial origin1.40E-03
42GO:0005985: sucrose metabolic process1.50E-03
43GO:0006863: purine nucleobase transport1.62E-03
44GO:2000377: regulation of reactive oxygen species metabolic process1.73E-03
45GO:0006825: copper ion transport1.85E-03
46GO:0031348: negative regulation of defense response2.09E-03
47GO:0001944: vasculature development2.22E-03
48GO:0006970: response to osmotic stress2.39E-03
49GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.48E-03
50GO:0000413: protein peptidyl-prolyl isomerization2.61E-03
51GO:0010182: sugar mediated signaling pathway2.74E-03
52GO:0010154: fruit development2.74E-03
53GO:0006814: sodium ion transport2.88E-03
54GO:0010183: pollen tube guidance3.02E-03
55GO:0000302: response to reactive oxygen species3.16E-03
56GO:0006635: fatty acid beta-oxidation3.16E-03
57GO:0071281: cellular response to iron ion3.45E-03
58GO:0009751: response to salicylic acid3.97E-03
59GO:0009753: response to jasmonic acid4.32E-03
60GO:0048573: photoperiodism, flowering4.54E-03
61GO:0008219: cell death4.87E-03
62GO:0009873: ethylene-activated signaling pathway5.19E-03
63GO:0006811: ion transport5.21E-03
64GO:0009734: auxin-activated signaling pathway5.66E-03
65GO:0006099: tricarboxylic acid cycle5.91E-03
66GO:0009926: auxin polar transport6.82E-03
67GO:0000165: MAPK cascade7.79E-03
68GO:0009736: cytokinin-activated signaling pathway8.40E-03
69GO:0051603: proteolysis involved in cellular protein catabolic process8.60E-03
70GO:0006417: regulation of translation9.01E-03
71GO:0006508: proteolysis9.62E-03
72GO:0048367: shoot system development9.65E-03
73GO:0009626: plant-type hypersensitive response9.87E-03
74GO:0006396: RNA processing1.10E-02
75GO:0009790: embryo development1.40E-02
76GO:0042742: defense response to bacterium1.45E-02
77GO:0006413: translational initiation1.51E-02
78GO:0007623: circadian rhythm1.58E-02
79GO:0010468: regulation of gene expression1.79E-02
80GO:0046686: response to cadmium ion2.26E-02
81GO:0009860: pollen tube growth2.27E-02
82GO:0045892: negative regulation of transcription, DNA-templated2.89E-02
83GO:0007165: signal transduction3.02E-02
84GO:0009408: response to heat3.32E-02
85GO:0048364: root development3.42E-02
RankGO TermAdjusted P value
1GO:0034387: 4-aminobutyrate:pyruvate transaminase activity0.00E+00
2GO:0015211: purine nucleoside transmembrane transporter activity0.00E+00
3GO:0016428: tRNA (cytosine-5-)-methyltransferase activity0.00E+00
4GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity2.76E-05
5GO:0003867: 4-aminobutyrate transaminase activity2.76E-05
6GO:0019829: cation-transporting ATPase activity1.23E-04
7GO:0004108: citrate (Si)-synthase activity1.83E-04
8GO:0030527: structural constituent of chromatin1.83E-04
9GO:0005253: anion channel activity2.48E-04
10GO:0004849: uridine kinase activity4.69E-04
11GO:0004602: glutathione peroxidase activity4.69E-04
12GO:0003950: NAD+ ADP-ribosyltransferase activity4.69E-04
13GO:0015140: malate transmembrane transporter activity5.49E-04
14GO:0004525: ribonuclease III activity6.32E-04
15GO:0005375: copper ion transmembrane transporter activity7.18E-04
16GO:0031490: chromatin DNA binding8.99E-04
17GO:0004177: aminopeptidase activity1.09E-03
18GO:0003691: double-stranded telomeric DNA binding1.09E-03
19GO:0015386: potassium:proton antiporter activity1.09E-03
20GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.29E-03
21GO:0004175: endopeptidase activity1.40E-03
22GO:0043424: protein histidine kinase binding1.85E-03
23GO:0005345: purine nucleobase transmembrane transporter activity1.85E-03
24GO:0004707: MAP kinase activity1.97E-03
25GO:0016779: nucleotidyltransferase activity2.09E-03
26GO:0003713: transcription coactivator activity2.74E-03
27GO:0004197: cysteine-type endopeptidase activity3.31E-03
28GO:0015385: sodium:proton antiporter activity3.45E-03
29GO:0050897: cobalt ion binding5.38E-03
30GO:0003755: peptidyl-prolyl cis-trans isomerase activity7.59E-03
31GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.28E-02
32GO:0030170: pyridoxal phosphate binding1.36E-02
33GO:0015144: carbohydrate transmembrane transporter activity1.43E-02
34GO:0005351: sugar:proton symporter activity1.56E-02
35GO:0003743: translation initiation factor activity1.77E-02
36GO:0042802: identical protein binding1.88E-02
37GO:0008168: methyltransferase activity2.10E-02
38GO:0003729: mRNA binding2.16E-02
39GO:0003682: chromatin binding2.24E-02
40GO:0008233: peptidase activity2.48E-02
41GO:0004497: monooxygenase activity2.51E-02
42GO:0005515: protein binding3.19E-02
RankGO TermAdjusted P value
1GO:0000323: lytic vacuole1.83E-04
2GO:0016363: nuclear matrix4.69E-04
3GO:0000783: nuclear telomere cap complex7.18E-04
4GO:0000785: chromatin3.31E-03
5GO:0010008: endosome membrane9.65E-03
6GO:0005774: vacuolar membrane1.12E-02
7GO:0005802: trans-Golgi network1.14E-02
8GO:0005768: endosome1.30E-02
9GO:0009705: plant-type vacuole membrane1.58E-02
10GO:0005773: vacuole1.93E-02
11GO:0005794: Golgi apparatus2.78E-02
12GO:0005634: nucleus3.60E-02
13GO:0005887: integral component of plasma membrane4.13E-02
14GO:0005886: plasma membrane4.54E-02
15GO:0022626: cytosolic ribosome4.84E-02
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Gene type



Gene DE type