Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G18080

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1903428: positive regulation of reactive oxygen species biosynthetic process0.00E+00
2GO:0010378: temperature compensation of the circadian clock0.00E+00
3GO:0009768: photosynthesis, light harvesting in photosystem I6.97E-19
4GO:0018298: protein-chromophore linkage1.04E-13
5GO:0009645: response to low light intensity stimulus4.91E-11
6GO:0015979: photosynthesis1.16E-09
7GO:0010218: response to far red light2.51E-09
8GO:0009644: response to high light intensity9.44E-09
9GO:0009769: photosynthesis, light harvesting in photosystem II2.53E-08
10GO:0010114: response to red light5.66E-07
11GO:0009416: response to light stimulus1.34E-05
12GO:0009637: response to blue light1.83E-05
13GO:0015812: gamma-aminobutyric acid transport3.37E-05
14GO:0032958: inositol phosphate biosynthetic process3.37E-05
15GO:0051170: nuclear import8.48E-05
16GO:0048511: rhythmic process8.81E-05
17GO:0010017: red or far-red light signaling pathway9.77E-05
18GO:0009409: response to cold1.28E-04
19GO:0006598: polyamine catabolic process1.47E-04
20GO:0007623: circadian rhythm1.68E-04
21GO:0006020: inositol metabolic process2.18E-04
22GO:0044211: CTP salvage2.18E-04
23GO:0009765: photosynthesis, light harvesting2.95E-04
24GO:0010600: regulation of auxin biosynthetic process2.95E-04
25GO:0044206: UMP salvage2.95E-04
26GO:0030104: water homeostasis2.95E-04
27GO:0048578: positive regulation of long-day photoperiodism, flowering3.77E-04
28GO:0043097: pyrimidine nucleoside salvage3.77E-04
29GO:0000160: phosphorelay signal transduction system3.85E-04
30GO:0009635: response to herbicide4.63E-04
31GO:0006206: pyrimidine nucleobase metabolic process4.63E-04
32GO:0009861: jasmonic acid and ethylene-dependent systemic resistance5.53E-04
33GO:0010244: response to low fluence blue light stimulus by blue low-fluence system5.53E-04
34GO:0042542: response to hydrogen peroxide5.68E-04
35GO:0008643: carbohydrate transport6.38E-04
36GO:0010161: red light signaling pathway6.47E-04
37GO:1900056: negative regulation of leaf senescence6.47E-04
38GO:0009704: de-etiolation7.44E-04
39GO:0010928: regulation of auxin mediated signaling pathway7.44E-04
40GO:0009585: red, far-red light phototransduction7.87E-04
41GO:0010099: regulation of photomorphogenesis8.45E-04
42GO:0009827: plant-type cell wall modification8.45E-04
43GO:0090333: regulation of stomatal closure9.49E-04
44GO:0048354: mucilage biosynthetic process involved in seed coat development1.06E-03
45GO:0010380: regulation of chlorophyll biosynthetic process1.06E-03
46GO:0009641: shade avoidance1.17E-03
47GO:0055062: phosphate ion homeostasis1.17E-03
48GO:0009718: anthocyanin-containing compound biosynthetic process1.52E-03
49GO:0009266: response to temperature stimulus1.65E-03
50GO:0055085: transmembrane transport1.78E-03
51GO:0003333: amino acid transmembrane transport2.33E-03
52GO:0009269: response to desiccation2.33E-03
53GO:0071215: cellular response to abscisic acid stimulus2.63E-03
54GO:0009658: chloroplast organization2.85E-03
55GO:0006814: sodium ion transport3.42E-03
56GO:0042752: regulation of circadian rhythm3.42E-03
57GO:0080167: response to karrikin3.53E-03
58GO:0000302: response to reactive oxygen species3.76E-03
59GO:0045892: negative regulation of transcription, DNA-templated4.28E-03
60GO:0006355: regulation of transcription, DNA-templated4.72E-03
61GO:0015995: chlorophyll biosynthetic process5.40E-03
62GO:0009817: defense response to fungus, incompatible interaction5.79E-03
63GO:0009910: negative regulation of flower development6.40E-03
64GO:0010119: regulation of stomatal movement6.40E-03
65GO:0009640: photomorphogenesis8.14E-03
66GO:0007165: signal transduction8.15E-03
67GO:0009735: response to cytokinin8.40E-03
68GO:0009611: response to wounding9.39E-03
69GO:0006812: cation transport9.54E-03
70GO:0009909: regulation of flower development1.08E-02
71GO:0009624: response to nematode1.28E-02
72GO:0006351: transcription, DNA-templated1.33E-02
73GO:0009058: biosynthetic process1.56E-02
74GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.05E-02
75GO:0010468: regulation of gene expression2.15E-02
76GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.08E-02
77GO:0010200: response to chitin3.08E-02
78GO:0044550: secondary metabolite biosynthetic process3.20E-02
79GO:0055114: oxidation-reduction process3.24E-02
80GO:0009737: response to abscisic acid3.97E-02
81GO:0006629: lipid metabolic process3.97E-02
82GO:0009753: response to jasmonic acid4.18E-02
83GO:0016310: phosphorylation4.57E-02
RankGO TermAdjusted P value
1GO:0030504: inorganic diphosphate transmembrane transporter activity0.00E+00
2GO:0031409: pigment binding2.52E-19
3GO:0016168: chlorophyll binding2.26E-16
4GO:0015185: gamma-aminobutyric acid transmembrane transporter activity3.37E-05
5GO:0033857: diphosphoinositol-pentakisphosphate kinase activity3.37E-05
6GO:0000829: inositol heptakisphosphate kinase activity3.37E-05
7GO:0000828: inositol hexakisphosphate kinase activity3.37E-05
8GO:0015180: L-alanine transmembrane transporter activity8.48E-05
9GO:0046592: polyamine oxidase activity1.47E-04
10GO:0015189: L-lysine transmembrane transporter activity2.18E-04
11GO:0015181: arginine transmembrane transporter activity2.18E-04
12GO:0000156: phosphorelay response regulator activity2.19E-04
13GO:0004845: uracil phosphoribosyltransferase activity2.95E-04
14GO:0005313: L-glutamate transmembrane transporter activity2.95E-04
15GO:0015562: efflux transmembrane transporter activity4.63E-04
16GO:0046872: metal ion binding5.44E-04
17GO:0004849: uridine kinase activity5.53E-04
18GO:0000989: transcription factor activity, transcription factor binding9.49E-04
19GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity9.49E-04
20GO:0047372: acylglycerol lipase activity1.28E-03
21GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.40E-03
22GO:0004022: alcohol dehydrogenase (NAD) activity1.52E-03
23GO:0005315: inorganic phosphate transmembrane transporter activity1.52E-03
24GO:0004565: beta-galactosidase activity1.52E-03
25GO:0008131: primary amine oxidase activity1.65E-03
26GO:0015297: antiporter activity1.78E-03
27GO:0005351: sugar:proton symporter activity1.82E-03
28GO:0008324: cation transmembrane transporter activity2.19E-03
29GO:0004707: MAP kinase activity2.33E-03
30GO:0008514: organic anion transmembrane transporter activity2.78E-03
31GO:0004497: monooxygenase activity3.53E-03
32GO:0015293: symporter activity8.82E-03
33GO:0005198: structural molecule activity8.82E-03
34GO:0015171: amino acid transmembrane transporter activity1.08E-02
35GO:0022857: transmembrane transporter activity1.23E-02
36GO:0019825: oxygen binding1.31E-02
37GO:0015144: carbohydrate transmembrane transporter activity1.71E-02
38GO:0005506: iron ion binding1.84E-02
39GO:0005515: protein binding2.35E-02
40GO:0008270: zinc ion binding2.35E-02
41GO:0020037: heme binding2.95E-02
42GO:0061630: ubiquitin protein ligase activity3.12E-02
43GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.62E-02
44GO:0016787: hydrolase activity4.00E-02
45GO:0004519: endonuclease activity4.22E-02
RankGO TermAdjusted P value
1GO:0030076: light-harvesting complex7.76E-17
2GO:0009522: photosystem I4.75E-15
3GO:0010287: plastoglobule1.79E-13
4GO:0009579: thylakoid4.22E-11
5GO:0009523: photosystem II2.52E-10
6GO:0009534: chloroplast thylakoid1.53E-09
7GO:0009535: chloroplast thylakoid membrane1.60E-08
8GO:0009941: chloroplast envelope4.62E-06
9GO:0016020: membrane3.04E-05
10GO:0016021: integral component of membrane3.83E-05
11GO:0042651: thylakoid membrane7.90E-05
12GO:0009517: PSII associated light-harvesting complex II2.95E-04
13GO:0009507: chloroplast7.17E-03
14GO:0031966: mitochondrial membrane9.54E-03
15GO:0016607: nuclear speck1.15E-02
16GO:0005654: nucleoplasm1.48E-02
17GO:0005623: cell1.54E-02
18GO:0005887: integral component of plasma membrane4.94E-02
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Gene type



Gene DE type