co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G17700

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0031564: transcription antitermination	0.00E+00
2	GO:0002191: cap-dependent translational initiation	0.00E+00
3	GO:0043419: urea catabolic process	0.00E+00
4	GO:0032499: detection of peptidoglycan	0.00E+00
5	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
6	GO:0039694: viral RNA genome replication	0.00E+00
7	GO:0042742: defense response to bacterium	1.76E-06
8	GO:2000072: regulation of defense response to fungus, incompatible interaction	3.29E-06
9	GO:0006468: protein phosphorylation	1.57E-05
10	GO:0001676: long-chain fatty acid metabolic process	2.67E-05
11	GO:0060548: negative regulation of cell death	4.83E-05
12	GO:0008219: cell death	6.99E-05
13	GO:0043687: post-translational protein modification	2.68E-04
14	GO:0002143: tRNA wobble position uridine thiolation	2.68E-04
15	GO:0006680: glucosylceramide catabolic process	2.68E-04
16	GO:0032491: detection of molecule of fungal origin	2.68E-04
17	GO:0009968: negative regulation of signal transduction	2.68E-04
18	GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine	2.68E-04
19	GO:0000077: DNA damage checkpoint	2.68E-04
20	GO:0006805: xenobiotic metabolic process	2.68E-04
21	GO:0043547: positive regulation of GTPase activity	2.68E-04
22	GO:0006422: aspartyl-tRNA aminoacylation	2.68E-04
23	GO:0009620: response to fungus	4.28E-04
24	GO:0030010: establishment of cell polarity	5.89E-04
25	GO:0002221: pattern recognition receptor signaling pathway	5.89E-04
26	GO:0015914: phospholipid transport	5.89E-04
27	GO:0040020: regulation of meiotic nuclear division	5.89E-04
28	GO:0045087: innate immune response	9.53E-04
29	GO:1900140: regulation of seedling development	9.55E-04
30	GO:0072661: protein targeting to plasma membrane	9.55E-04
31	GO:0006517: protein deglycosylation	9.55E-04
32	GO:0006952: defense response	1.18E-03
33	GO:0000027: ribosomal large subunit assembly	1.21E-03
34	GO:0072583: clathrin-dependent endocytosis	1.36E-03
35	GO:0071323: cellular response to chitin	1.36E-03
36	GO:0000187: activation of MAPK activity	1.36E-03
37	GO:0048194: Golgi vesicle budding	1.36E-03
38	GO:0007166: cell surface receptor signaling pathway	1.38E-03
39	GO:0031348: negative regulation of defense response	1.60E-03
40	GO:0010227: floral organ abscission	1.74E-03
41	GO:0071219: cellular response to molecule of bacterial origin	1.83E-03
42	GO:2000038: regulation of stomatal complex development	1.83E-03
43	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	1.83E-03
44	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	1.83E-03
45	GO:0080142: regulation of salicylic acid biosynthetic process	1.83E-03
46	GO:0000460: maturation of 5.8S rRNA	1.83E-03
47	GO:0018279: protein N-linked glycosylation via asparagine	2.33E-03
48	GO:0031365: N-terminal protein amino acid modification	2.33E-03
49	GO:0045116: protein neddylation	2.33E-03
50	GO:0006623: protein targeting to vacuole	2.75E-03
51	GO:0047484: regulation of response to osmotic stress	2.88E-03
52	GO:0001731: formation of translation preinitiation complex	2.88E-03
53	GO:0006751: glutathione catabolic process	2.88E-03
54	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	2.88E-03
55	GO:0000470: maturation of LSU-rRNA	2.88E-03
56	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	2.88E-03
57	GO:0000302: response to reactive oxygen species	2.94E-03
58	GO:0010193: response to ozone	2.94E-03
59	GO:0010200: response to chitin	3.20E-03
60	GO:0016192: vesicle-mediated transport	3.28E-03
61	GO:0030163: protein catabolic process	3.35E-03
62	GO:0009612: response to mechanical stimulus	3.46E-03
63	GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	3.46E-03
64	GO:0006694: steroid biosynthetic process	3.46E-03
65	GO:2000037: regulation of stomatal complex patterning	3.46E-03
66	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.46E-03
67	GO:0000911: cytokinesis by cell plate formation	3.46E-03
68	GO:0070370: cellular heat acclimation	4.08E-03
69	GO:0043090: amino acid import	4.08E-03
70	GO:0009615: response to virus	4.25E-03
71	GO:0009607: response to biotic stimulus	4.49E-03
72	GO:0006491: N-glycan processing	4.73E-03
73	GO:0000028: ribosomal small subunit assembly	4.73E-03
74	GO:0006102: isocitrate metabolic process	4.73E-03
75	GO:0006367: transcription initiation from RNA polymerase II promoter	5.42E-03
76	GO:0006261: DNA-dependent DNA replication	5.42E-03
77	GO:0006002: fructose 6-phosphate metabolic process	5.42E-03
78	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	5.42E-03
79	GO:0009880: embryonic pattern specification	5.42E-03
80	GO:0006413: translational initiation	5.47E-03
81	GO:0009817: defense response to fungus, incompatible interaction	5.54E-03
82	GO:0015031: protein transport	5.95E-03
83	GO:0006499: N-terminal protein myristoylation	6.11E-03
84	GO:0009407: toxin catabolic process	6.11E-03
85	GO:0010332: response to gamma radiation	6.14E-03
86	GO:0046685: response to arsenic-containing substance	6.14E-03
87	GO:0009821: alkaloid biosynthetic process	6.14E-03
88	GO:0042761: very long-chain fatty acid biosynthetic process	6.90E-03
89	GO:0009617: response to bacterium	7.49E-03
90	GO:0006995: cellular response to nitrogen starvation	7.68E-03
91	GO:0000103: sulfate assimilation	7.68E-03
92	GO:0006887: exocytosis	8.35E-03
93	GO:0006631: fatty acid metabolic process	8.35E-03
94	GO:0030148: sphingolipid biosynthetic process	8.50E-03
95	GO:0009734: auxin-activated signaling pathway	9.25E-03
96	GO:0010105: negative regulation of ethylene-activated signaling pathway	9.35E-03
97	GO:0071365: cellular response to auxin stimulus	9.35E-03
98	GO:0009636: response to toxic substance	1.02E-02
99	GO:0010102: lateral root morphogenesis	1.02E-02
100	GO:0006807: nitrogen compound metabolic process	1.02E-02
101	GO:0010229: inflorescence development	1.02E-02
102	GO:0002237: response to molecule of bacterial origin	1.11E-02
103	GO:0006446: regulation of translational initiation	1.11E-02
104	GO:0034605: cellular response to heat	1.11E-02
105	GO:0009414: response to water deprivation	1.16E-02
106	GO:0070588: calcium ion transmembrane transport	1.21E-02
107	GO:0010053: root epidermal cell differentiation	1.21E-02
108	GO:0034976: response to endoplasmic reticulum stress	1.30E-02
109	GO:0030150: protein import into mitochondrial matrix	1.40E-02
110	GO:0010187: negative regulation of seed germination	1.40E-02
111	GO:0046777: protein autophosphorylation	1.49E-02
112	GO:0006874: cellular calcium ion homeostasis	1.50E-02
113	GO:0009626: plant-type hypersensitive response	1.54E-02
114	GO:0015992: proton transport	1.61E-02
115	GO:0061077: chaperone-mediated protein folding	1.61E-02
116	GO:0009553: embryo sac development	1.69E-02
117	GO:0009814: defense response, incompatible interaction	1.71E-02
118	GO:0007131: reciprocal meiotic recombination	1.71E-02
119	GO:0045454: cell redox homeostasis	1.72E-02
120	GO:0006886: intracellular protein transport	1.79E-02
121	GO:0009742: brassinosteroid mediated signaling pathway	1.85E-02
122	GO:0006284: base-excision repair	1.94E-02
123	GO:0042127: regulation of cell proliferation	1.94E-02
124	GO:0009306: protein secretion	1.94E-02
125	GO:0042391: regulation of membrane potential	2.17E-02
126	GO:0008033: tRNA processing	2.17E-02
127	GO:0010501: RNA secondary structure unwinding	2.17E-02
128	GO:0000413: protein peptidyl-prolyl isomerization	2.17E-02
129	GO:0009751: response to salicylic acid	2.21E-02
130	GO:0008360: regulation of cell shape	2.29E-02
131	GO:0006662: glycerol ether metabolic process	2.29E-02
132	GO:0010197: polar nucleus fusion	2.29E-02
133	GO:0010182: sugar mediated signaling pathway	2.29E-02
134	GO:0061025: membrane fusion	2.41E-02
135	GO:0009749: response to glucose	2.53E-02
136	GO:0046686: response to cadmium ion	2.58E-02
137	GO:0002229: defense response to oomycetes	2.65E-02
138	GO:0010150: leaf senescence	3.02E-02
139	GO:0050832: defense response to fungus	3.02E-02
140	GO:0010252: auxin homeostasis	3.04E-02
141	GO:0019760: glucosinolate metabolic process	3.04E-02
142	GO:0006904: vesicle docking involved in exocytosis	3.18E-02
143	GO:0001666: response to hypoxia	3.45E-02
144	GO:0006470: protein dephosphorylation	3.45E-02
145	GO:0016126: sterol biosynthetic process	3.45E-02
146	GO:0008380: RNA splicing	3.60E-02
147	GO:0006906: vesicle fusion	3.73E-02
148	GO:0009627: systemic acquired resistance	3.73E-02
149	GO:0016049: cell growth	4.02E-02
150	GO:0007165: signal transduction	4.16E-02
151	GO:0048527: lateral root development	4.62E-02
152	GO:0010119: regulation of stomatal movement	4.62E-02
153	GO:0009631: cold acclimation	4.62E-02
154	GO:0010043: response to zinc ion	4.62E-02
155	GO:0006865: amino acid transport	4.77E-02
156	GO:0009867: jasmonic acid mediated signaling pathway	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0004631: phosphomevalonate kinase activity	0.00E+00
2	GO:0098808: mRNA cap binding	0.00E+00
3	GO:0001072: transcription antitermination factor activity, RNA binding	0.00E+00
4	GO:0009039: urease activity	0.00E+00
5	GO:0043916: DNA-7-methylguanine glycosylase activity	0.00E+00
6	GO:0052822: DNA-3-methylguanine glycosylase activity	0.00E+00
7	GO:0061605: molybdopterin-synthase adenylyltransferase activity	0.00E+00
8	GO:2001080: chitosan binding	0.00E+00
9	GO:0052821: DNA-7-methyladenine glycosylase activity	0.00E+00
10	GO:0015370: solute:sodium symporter activity	0.00E+00
11	GO:0061604: molybdopterin-synthase sulfurtransferase activity	0.00E+00
12	GO:0003905: alkylbase DNA N-glycosylase activity	0.00E+00
13	GO:0004164: diphthine synthase activity	0.00E+00
14	GO:0004714: transmembrane receptor protein tyrosine kinase activity	5.93E-06
15	GO:0005524: ATP binding	8.12E-06
16	GO:0004674: protein serine/threonine kinase activity	2.44E-05
17	GO:0000166: nucleotide binding	3.99E-05
18	GO:0008641: small protein activating enzyme activity	7.68E-05
19	GO:0016301: kinase activity	9.15E-05
20	GO:0033612: receptor serine/threonine kinase binding	1.15E-04
21	GO:0102391: decanoate--CoA ligase activity	1.53E-04
22	GO:0043295: glutathione binding	2.02E-04
23	GO:0004467: long-chain fatty acid-CoA ligase activity	2.02E-04
24	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	2.68E-04
25	GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity	2.68E-04
26	GO:0004348: glucosylceramidase activity	2.68E-04
27	GO:0042134: rRNA primary transcript binding	2.68E-04
28	GO:0032050: clathrin heavy chain binding	2.68E-04
29	GO:0015085: calcium ion transmembrane transporter activity	2.68E-04
30	GO:0004815: aspartate-tRNA ligase activity	2.68E-04
31	GO:0045140: inositol phosphoceramide synthase activity	5.89E-04
32	GO:0019781: NEDD8 activating enzyme activity	5.89E-04
33	GO:0038199: ethylene receptor activity	5.89E-04
34	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	7.86E-04
35	GO:0004557: alpha-galactosidase activity	9.55E-04
36	GO:0003840: gamma-glutamyltransferase activity	9.55E-04
37	GO:0036374: glutathione hydrolase activity	9.55E-04
38	GO:0052692: raffinose alpha-galactosidase activity	9.55E-04
39	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	9.55E-04
40	GO:0016151: nickel cation binding	9.55E-04
41	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	9.55E-04
42	GO:0004190: aspartic-type endopeptidase activity	9.87E-04
43	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.02E-03
44	GO:0005528: FK506 binding	1.21E-03
45	GO:0009678: hydrogen-translocating pyrophosphatase activity	1.36E-03
46	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.36E-03
47	GO:0004792: thiosulfate sulfurtransferase activity	1.36E-03
48	GO:0051740: ethylene binding	1.36E-03
49	GO:0031176: endo-1,4-beta-xylanase activity	1.36E-03
50	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.36E-03
51	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.59E-03
52	GO:0019199: transmembrane receptor protein kinase activity	1.83E-03
53	GO:0004930: G-protein coupled receptor activity	1.83E-03
54	GO:0004576: oligosaccharyl transferase activity	1.83E-03
55	GO:0015204: urea transmembrane transporter activity	1.83E-03
56	GO:0005516: calmodulin binding	2.06E-03
57	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	2.33E-03
58	GO:0004040: amidase activity	2.33E-03
59	GO:0008725: DNA-3-methyladenine glycosylase activity	2.33E-03
60	GO:0004672: protein kinase activity	2.56E-03
61	GO:0030976: thiamine pyrophosphate binding	2.88E-03
62	GO:0004012: phospholipid-translocating ATPase activity	3.46E-03
63	GO:0005261: cation channel activity	3.46E-03
64	GO:0004602: glutathione peroxidase activity	3.46E-03
65	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.78E-03
66	GO:0030515: snoRNA binding	4.08E-03
67	GO:0008320: protein transmembrane transporter activity	4.08E-03
68	GO:0008235: metalloexopeptidase activity	4.08E-03
69	GO:0004427: inorganic diphosphatase activity	4.08E-03
70	GO:0003872: 6-phosphofructokinase activity	4.08E-03
71	GO:0004708: MAP kinase kinase activity	4.73E-03
72	GO:0003843: 1,3-beta-D-glucan synthase activity	5.42E-03
73	GO:0016844: strictosidine synthase activity	6.90E-03
74	GO:0003697: single-stranded DNA binding	7.02E-03
75	GO:0003743: translation initiation factor activity	7.29E-03
76	GO:0005515: protein binding	7.48E-03
77	GO:0004713: protein tyrosine kinase activity	7.68E-03
78	GO:0004673: protein histidine kinase activity	7.68E-03
79	GO:0008794: arsenate reductase (glutaredoxin) activity	8.50E-03
80	GO:0001054: RNA polymerase I activity	8.50E-03
81	GO:0004177: aminopeptidase activity	8.50E-03
82	GO:0004364: glutathione transferase activity	8.70E-03
83	GO:0005484: SNAP receptor activity	9.06E-03
84	GO:0015293: symporter activity	1.02E-02
85	GO:0000155: phosphorelay sensor kinase activity	1.02E-02
86	GO:0005388: calcium-transporting ATPase activity	1.02E-02
87	GO:0008061: chitin binding	1.21E-02
88	GO:0003712: transcription cofactor activity	1.21E-02
89	GO:0005217: intracellular ligand-gated ion channel activity	1.21E-02
90	GO:0004970: ionotropic glutamate receptor activity	1.21E-02
91	GO:0030552: cAMP binding	1.21E-02
92	GO:0030553: cGMP binding	1.21E-02
93	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.22E-02
94	GO:0003954: NADH dehydrogenase activity	1.40E-02
95	GO:0005216: ion channel activity	1.50E-02
96	GO:0015035: protein disulfide oxidoreductase activity	1.80E-02
97	GO:0016746: transferase activity, transferring acyl groups	1.80E-02
98	GO:0003756: protein disulfide isomerase activity	1.94E-02
99	GO:0008514: organic anion transmembrane transporter activity	1.94E-02
100	GO:0046872: metal ion binding	1.95E-02
101	GO:0047134: protein-disulfide reductase activity	2.05E-02
102	GO:0005249: voltage-gated potassium channel activity	2.17E-02
103	GO:0030551: cyclic nucleotide binding	2.17E-02
104	GO:0004527: exonuclease activity	2.29E-02
105	GO:0030276: clathrin binding	2.29E-02
106	GO:0008536: Ran GTPase binding	2.29E-02
107	GO:0010181: FMN binding	2.41E-02
108	GO:0004791: thioredoxin-disulfide reductase activity	2.41E-02
109	GO:0004872: receptor activity	2.53E-02
110	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.91E-02
111	GO:0004721: phosphoprotein phosphatase activity	3.88E-02
112	GO:0004004: ATP-dependent RNA helicase activity	3.88E-02
113	GO:0030247: polysaccharide binding	3.88E-02
114	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.88E-02
115	GO:0004806: triglyceride lipase activity	3.88E-02
116	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.17E-02
117	GO:0005096: GTPase activator activity	4.32E-02
118	GO:0008168: methyltransferase activity	4.49E-02
119	GO:0000287: magnesium ion binding	4.57E-02
120	GO:0050897: cobalt ion binding	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0005674: transcription factor TFIIF complex	0.00E+00
2	GO:0019034: viral replication complex	0.00E+00
3	GO:0005886: plasma membrane	1.71E-09
4	GO:0016021: integral component of membrane	1.51E-05
5	GO:0034388: Pwp2p-containing subcomplex of 90S preribosome	2.68E-04
6	GO:0009504: cell plate	2.85E-04
7	GO:0030665: clathrin-coated vesicle membrane	4.50E-04
8	GO:0017119: Golgi transport complex	5.26E-04
9	GO:0031304: intrinsic component of mitochondrial inner membrane	5.89E-04
10	GO:0046861: glyoxysomal membrane	9.55E-04
11	GO:0043234: protein complex	1.10E-03
12	GO:0070062: extracellular exosome	1.36E-03
13	GO:0005887: integral component of plasma membrane	2.21E-03
14	GO:0005783: endoplasmic reticulum	2.32E-03
15	GO:0008250: oligosaccharyltransferase complex	2.33E-03
16	GO:0005945: 6-phosphofructokinase complex	2.33E-03
17	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	2.52E-03
18	GO:0005773: vacuole	2.69E-03
19	GO:0016282: eukaryotic 43S preinitiation complex	2.88E-03
20	GO:0033290: eukaryotic 48S preinitiation complex	3.46E-03
21	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	4.08E-03
22	GO:0030687: preribosome, large subunit precursor	4.08E-03
23	GO:0030131: clathrin adaptor complex	4.73E-03
24	GO:0005829: cytosol	4.92E-03
25	GO:0000148: 1,3-beta-D-glucan synthase complex	5.42E-03
26	GO:0009514: glyoxysome	5.42E-03
27	GO:0019005: SCF ubiquitin ligase complex	5.54E-03
28	GO:0031901: early endosome membrane	6.14E-03
29	GO:0005736: DNA-directed RNA polymerase I complex	6.14E-03
30	GO:0030125: clathrin vesicle coat	7.68E-03
31	GO:0005802: trans-Golgi network	8.07E-03
32	GO:0031902: late endosome membrane	8.35E-03
33	GO:0032040: small-subunit processome	9.35E-03
34	GO:0005768: endosome	1.01E-02
35	GO:0010008: endosome membrane	1.50E-02
36	GO:0005834: heterotrimeric G-protein complex	1.54E-02
37	GO:0005777: peroxisome	1.62E-02
38	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.94E-02
39	GO:0005789: endoplasmic reticulum membrane	2.50E-02
40	GO:0019898: extrinsic component of membrane	2.53E-02
41	GO:0000145: exocyst	2.78E-02
42	GO:0009506: plasmodesma	2.98E-02
43	GO:0032580: Golgi cisterna membrane	3.04E-02
44	GO:0005794: Golgi apparatus	3.23E-02
45	GO:0000932: P-body	3.45E-02
46	GO:0005788: endoplasmic reticulum lumen	3.59E-02