Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G17040

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1901401: regulation of tetrapyrrole metabolic process0.00E+00
2GO:1902171: regulation of tocopherol cyclase activity0.00E+00
3GO:0090706: specification of plant organ position0.00E+00
4GO:0033231: carbohydrate export0.00E+00
5GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process0.00E+00
6GO:0015995: chlorophyll biosynthetic process6.71E-06
7GO:0000476: maturation of 4.5S rRNA2.76E-05
8GO:0000967: rRNA 5'-end processing2.76E-05
9GO:0046467: membrane lipid biosynthetic process2.76E-05
10GO:0010450: inflorescence meristem growth2.76E-05
11GO:1902334: fructose export from vacuole to cytoplasm2.76E-05
12GO:0015755: fructose transport2.76E-05
13GO:0090342: regulation of cell aging7.01E-05
14GO:0034470: ncRNA processing7.01E-05
15GO:0045165: cell fate commitment1.23E-04
16GO:0051205: protein insertion into membrane2.48E-04
17GO:0045038: protein import into chloroplast thylakoid membrane3.18E-04
18GO:1902183: regulation of shoot apical meristem development3.18E-04
19GO:0010158: abaxial cell fate specification3.18E-04
20GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway3.92E-04
21GO:0009228: thiamine biosynthetic process3.92E-04
22GO:0010019: chloroplast-nucleus signaling pathway4.69E-04
23GO:1900056: negative regulation of leaf senescence5.49E-04
24GO:0050821: protein stabilization6.32E-04
25GO:0005978: glycogen biosynthetic process6.32E-04
26GO:0046620: regulation of organ growth6.32E-04
27GO:0010093: specification of floral organ identity7.18E-04
28GO:0071482: cellular response to light stimulus7.18E-04
29GO:0009734: auxin-activated signaling pathway7.27E-04
30GO:0010206: photosystem II repair8.07E-04
31GO:2000024: regulation of leaf development8.07E-04
32GO:0010380: regulation of chlorophyll biosynthetic process8.99E-04
33GO:0006995: cellular response to nitrogen starvation9.92E-04
34GO:0043085: positive regulation of catalytic activity1.09E-03
35GO:0009750: response to fructose1.09E-03
36GO:0009698: phenylpropanoid metabolic process1.09E-03
37GO:0009933: meristem structural organization1.40E-03
38GO:0007623: circadian rhythm1.45E-03
39GO:0010030: positive regulation of seed germination1.50E-03
40GO:0034976: response to endoplasmic reticulum stress1.62E-03
41GO:0009944: polarity specification of adaxial/abaxial axis1.73E-03
42GO:0016114: terpenoid biosynthetic process1.97E-03
43GO:0051260: protein homooligomerization1.97E-03
44GO:0009658: chloroplast organization2.22E-03
45GO:0070417: cellular response to cold2.48E-03
46GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.48E-03
47GO:0042631: cellular response to water deprivation2.61E-03
48GO:0010154: fruit development2.74E-03
49GO:0009646: response to absence of light2.88E-03
50GO:0019252: starch biosynthetic process3.02E-03
51GO:0010193: response to ozone3.16E-03
52GO:0006629: lipid metabolic process4.03E-03
53GO:0010027: thylakoid membrane organization4.06E-03
54GO:0016311: dephosphorylation4.70E-03
55GO:0007568: aging5.38E-03
56GO:0009910: negative regulation of flower development5.38E-03
57GO:0007275: multicellular organism development5.46E-03
58GO:0034599: cellular response to oxidative stress5.91E-03
59GO:0009926: auxin polar transport6.82E-03
60GO:0006364: rRNA processing8.40E-03
61GO:0009585: red, far-red light phototransduction8.40E-03
62GO:0010224: response to UV-B8.60E-03
63GO:0006857: oligopeptide transport8.81E-03
64GO:0009909: regulation of flower development9.01E-03
65GO:0040008: regulation of growth1.53E-02
66GO:0009733: response to auxin1.62E-02
67GO:0042254: ribosome biogenesis2.19E-02
68GO:0009723: response to ethylene2.39E-02
69GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.58E-02
70GO:0015979: photosynthesis2.76E-02
71GO:0045454: cell redox homeostasis2.86E-02
72GO:0032259: methylation3.22E-02
RankGO TermAdjusted P value
1GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity0.00E+00
2GO:0015284: fructose uniporter activity0.00E+00
3GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity0.00E+00
4GO:0046906: tetrapyrrole binding2.76E-05
5GO:0005353: fructose transmembrane transporter activity7.01E-05
6GO:0016868: intramolecular transferase activity, phosphotransferases7.01E-05
7GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity7.01E-05
8GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity7.01E-05
9GO:0008878: glucose-1-phosphate adenylyltransferase activity2.48E-04
10GO:0035673: oligopeptide transmembrane transporter activity3.92E-04
11GO:0019899: enzyme binding5.49E-04
12GO:0016298: lipase activity6.38E-04
13GO:0015198: oligopeptide transporter activity1.19E-03
14GO:0051119: sugar transmembrane transporter activity1.50E-03
15GO:0003954: NADH dehydrogenase activity1.73E-03
16GO:0003756: protein disulfide isomerase activity2.35E-03
17GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity4.87E-03
18GO:0003993: acid phosphatase activity5.91E-03
19GO:0004185: serine-type carboxypeptidase activity6.82E-03
20GO:0005515: protein binding1.27E-02
21GO:0008168: methyltransferase activity2.10E-02
22GO:0046982: protein heterodimerization activity2.13E-02
23GO:0016787: hydrolase activity3.10E-02
24GO:0008289: lipid binding4.20E-02
RankGO TermAdjusted P value
1GO:0009534: chloroplast thylakoid5.09E-07
2GO:0009507: chloroplast9.39E-06
3GO:0009535: chloroplast thylakoid membrane2.36E-05
4GO:0031304: intrinsic component of mitochondrial inner membrane7.01E-05
5GO:0009543: chloroplast thylakoid lumen7.23E-05
6GO:0031977: thylakoid lumen4.27E-04
7GO:0009941: chloroplast envelope8.01E-04
8GO:0016602: CCAAT-binding factor complex1.29E-03
9GO:0030095: chloroplast photosystem II1.40E-03
10GO:0009570: chloroplast stroma6.15E-03
11GO:0009579: thylakoid8.51E-03
12GO:0009706: chloroplast inner membrane1.07E-02
13GO:0010287: plastoglobule1.21E-02
14GO:0005623: cell1.28E-02
15GO:0009705: plant-type vacuole membrane1.58E-02
16GO:0016021: integral component of membrane1.95E-02
17GO:0031969: chloroplast membrane2.51E-02
18GO:0005887: integral component of plasma membrane4.13E-02
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Gene type



Gene DE type