GO Enrichment Analysis of Co-expressed Genes with
AT3G16520
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1903428: positive regulation of reactive oxygen species biosynthetic process | 0.00E+00 |
| 2 | GO:0046677: response to antibiotic | 0.00E+00 |
| 3 | GO:0009768: photosynthesis, light harvesting in photosystem I | 5.54E-10 |
| 4 | GO:0009645: response to low light intensity stimulus | 3.78E-09 |
| 5 | GO:0018298: protein-chromophore linkage | 1.70E-08 |
| 6 | GO:0009644: response to high light intensity | 6.35E-08 |
| 7 | GO:0015979: photosynthesis | 9.72E-08 |
| 8 | GO:0010218: response to far red light | 2.48E-06 |
| 9 | GO:0010114: response to red light | 4.93E-06 |
| 10 | GO:0050992: dimethylallyl diphosphate biosynthetic process | 3.88E-05 |
| 11 | GO:0090153: regulation of sphingolipid biosynthetic process | 6.95E-05 |
| 12 | GO:0009723: response to ethylene | 8.72E-05 |
| 13 | GO:0015995: chlorophyll biosynthetic process | 1.13E-04 |
| 14 | GO:0030104: water homeostasis | 1.45E-04 |
| 15 | GO:0010023: proanthocyanidin biosynthetic process | 1.45E-04 |
| 16 | GO:0009765: photosynthesis, light harvesting | 1.45E-04 |
| 17 | GO:0010600: regulation of auxin biosynthetic process | 1.45E-04 |
| 18 | GO:0009637: response to blue light | 1.63E-04 |
| 19 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 2.34E-04 |
| 20 | GO:0010189: vitamin E biosynthetic process | 2.82E-04 |
| 21 | GO:0071470: cellular response to osmotic stress | 2.82E-04 |
| 22 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 2.82E-04 |
| 23 | GO:0051510: regulation of unidimensional cell growth | 3.32E-04 |
| 24 | GO:0010161: red light signaling pathway | 3.32E-04 |
| 25 | GO:0009769: photosynthesis, light harvesting in photosystem II | 3.32E-04 |
| 26 | GO:0009704: de-etiolation | 3.84E-04 |
| 27 | GO:0010928: regulation of auxin mediated signaling pathway | 3.84E-04 |
| 28 | GO:0090333: regulation of stomatal closure | 4.93E-04 |
| 29 | GO:0030148: sphingolipid biosynthetic process | 6.67E-04 |
| 30 | GO:0007623: circadian rhythm | 6.98E-04 |
| 31 | GO:0018107: peptidyl-threonine phosphorylation | 7.91E-04 |
| 32 | GO:0009718: anthocyanin-containing compound biosynthetic process | 7.91E-04 |
| 33 | GO:0009269: response to desiccation | 1.19E-03 |
| 34 | GO:0010017: red or far-red light signaling pathway | 1.26E-03 |
| 35 | GO:0009409: response to cold | 1.27E-03 |
| 36 | GO:0071215: cellular response to abscisic acid stimulus | 1.34E-03 |
| 37 | GO:0070417: cellular response to cold | 1.49E-03 |
| 38 | GO:0009741: response to brassinosteroid | 1.65E-03 |
| 39 | GO:0007018: microtubule-based movement | 1.73E-03 |
| 40 | GO:0006814: sodium ion transport | 1.73E-03 |
| 41 | GO:0009791: post-embryonic development | 1.81E-03 |
| 42 | GO:0006629: lipid metabolic process | 1.89E-03 |
| 43 | GO:0009735: response to cytokinin | 3.03E-03 |
| 44 | GO:0006865: amino acid transport | 3.30E-03 |
| 45 | GO:0009416: response to light stimulus | 3.31E-03 |
| 46 | GO:0034599: cellular response to oxidative stress | 3.50E-03 |
| 47 | GO:0009651: response to salt stress | 3.99E-03 |
| 48 | GO:0009585: red, far-red light phototransduction | 4.95E-03 |
| 49 | GO:0009624: response to nematode | 6.31E-03 |
| 50 | GO:0018105: peptidyl-serine phosphorylation | 6.44E-03 |
| 51 | GO:0009742: brassinosteroid mediated signaling pathway | 6.57E-03 |
| 52 | GO:0009739: response to gibberellin | 9.99E-03 |
| 53 | GO:0046686: response to cadmium ion | 1.04E-02 |
| 54 | GO:0009826: unidimensional cell growth | 1.22E-02 |
| 55 | GO:0009737: response to abscisic acid | 1.42E-02 |
| 56 | GO:0080167: response to karrikin | 1.46E-02 |
| 57 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.50E-02 |
| 58 | GO:0032259: methylation | 1.87E-02 |
| 59 | GO:0055114: oxidation-reduction process | 1.90E-02 |
| 60 | GO:0009751: response to salicylic acid | 1.91E-02 |
| 61 | GO:0009753: response to jasmonic acid | 2.02E-02 |
| 62 | GO:0009555: pollen development | 2.90E-02 |
| 63 | GO:0035556: intracellular signal transduction | 3.01E-02 |
| 64 | GO:0055085: transmembrane transport | 3.44E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 2 | GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | 0.00E+00 |
| 3 | GO:0030504: inorganic diphosphate transmembrane transporter activity | 0.00E+00 |
| 4 | GO:0031409: pigment binding | 3.37E-10 |
| 5 | GO:0016168: chlorophyll binding | 1.04E-08 |
| 6 | GO:0052631: sphingolipid delta-8 desaturase activity | 1.48E-05 |
| 7 | GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | 1.48E-05 |
| 8 | GO:0008158: hedgehog receptor activity | 1.48E-05 |
| 9 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 6.95E-05 |
| 10 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 1.05E-04 |
| 11 | GO:0051538: 3 iron, 4 sulfur cluster binding | 1.88E-04 |
| 12 | GO:0047372: acylglycerol lipase activity | 6.67E-04 |
| 13 | GO:0005315: inorganic phosphate transmembrane transporter activity | 7.91E-04 |
| 14 | GO:0004190: aspartic-type endopeptidase activity | 9.19E-04 |
| 15 | GO:0008514: organic anion transmembrane transporter activity | 1.41E-03 |
| 16 | GO:0046872: metal ion binding | 1.88E-03 |
| 17 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.26E-03 |
| 18 | GO:0015293: symporter activity | 4.37E-03 |
| 19 | GO:0003777: microtubule motor activity | 5.31E-03 |
| 20 | GO:0015171: amino acid transmembrane transporter activity | 5.31E-03 |
| 21 | GO:0016874: ligase activity | 6.05E-03 |
| 22 | GO:0004674: protein serine/threonine kinase activity | 6.48E-03 |
| 23 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 7.51E-03 |
| 24 | GO:0015144: carbohydrate transmembrane transporter activity | 8.35E-03 |
| 25 | GO:0005351: sugar:proton symporter activity | 9.08E-03 |
| 26 | GO:0008017: microtubule binding | 9.53E-03 |
| 27 | GO:0004672: protein kinase activity | 9.79E-03 |
| 28 | GO:0008168: methyltransferase activity | 1.22E-02 |
| 29 | GO:0008233: peptidase activity | 1.44E-02 |
| 30 | GO:0016887: ATPase activity | 2.63E-02 |
| 31 | GO:0016301: kinase activity | 3.06E-02 |
| 32 | GO:0005506: iron ion binding | 4.74E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009534: chloroplast thylakoid | 8.86E-10 |
| 2 | GO:0009522: photosystem I | 2.74E-09 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 3.49E-09 |
| 4 | GO:0009579: thylakoid | 3.91E-08 |
| 5 | GO:0009941: chloroplast envelope | 6.59E-08 |
| 6 | GO:0030076: light-harvesting complex | 8.30E-08 |
| 7 | GO:0010287: plastoglobule | 3.46E-07 |
| 8 | GO:0009523: photosystem II | 5.84E-07 |
| 9 | GO:0009507: chloroplast | 3.73E-06 |
| 10 | GO:0016020: membrane | 5.52E-05 |
| 11 | GO:0009517: PSII associated light-harvesting complex II | 1.45E-04 |
| 12 | GO:0030660: Golgi-associated vesicle membrane | 1.45E-04 |
| 13 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 1.45E-04 |
| 14 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 3.84E-04 |
| 15 | GO:0009538: photosystem I reaction center | 3.84E-04 |
| 16 | GO:0005765: lysosomal membrane | 6.67E-04 |
| 17 | GO:0042651: thylakoid membrane | 1.12E-03 |
| 18 | GO:0016021: integral component of membrane | 1.22E-03 |
| 19 | GO:0005871: kinesin complex | 1.49E-03 |
| 20 | GO:0010008: endosome membrane | 5.68E-03 |
| 21 | GO:0009706: chloroplast inner membrane | 6.31E-03 |
| 22 | GO:0005874: microtubule | 1.43E-02 |
| 23 | GO:0031969: chloroplast membrane | 1.46E-02 |
| 24 | GO:0009570: chloroplast stroma | 4.38E-02 |
| 25 | GO:0005768: endosome | 4.45E-02 |
| 26 | GO:0005783: endoplasmic reticulum | 4.66E-02 |