co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G16240

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006114: glycerol biosynthetic process	0.00E+00
2	GO:0042493: response to drug	0.00E+00
3	GO:1905499: trichome papilla formation	0.00E+00
4	GO:1901698: response to nitrogen compound	0.00E+00
5	GO:0010411: xyloglucan metabolic process	6.15E-06
6	GO:0042546: cell wall biogenesis	2.32E-05
7	GO:0009958: positive gravitropism	4.66E-05
8	GO:0042254: ribosome biogenesis	4.82E-05
9	GO:0071555: cell wall organization	7.30E-05
10	GO:0046520: sphingoid biosynthetic process	1.22E-04
11	GO:0010442: guard cell morphogenesis	1.22E-04
12	GO:0042759: long-chain fatty acid biosynthetic process	1.22E-04
13	GO:0042371: vitamin K biosynthetic process	1.22E-04
14	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	1.22E-04
15	GO:0006949: syncytium formation	1.71E-04
16	GO:0010115: regulation of abscisic acid biosynthetic process	2.82E-04
17	GO:0010541: acropetal auxin transport	2.82E-04
18	GO:0001736: establishment of planar polarity	2.82E-04
19	GO:0071258: cellular response to gravity	2.82E-04
20	GO:0052541: plant-type cell wall cellulose metabolic process	2.82E-04
21	GO:0010143: cutin biosynthetic process	3.00E-04
22	GO:0009926: auxin polar transport	3.24E-04
23	GO:0010025: wax biosynthetic process	3.77E-04
24	GO:0009826: unidimensional cell growth	3.81E-04
25	GO:0010160: formation of animal organ boundary	4.65E-04
26	GO:0071705: nitrogen compound transport	4.65E-04
27	GO:0015714: phosphoenolpyruvate transport	4.65E-04
28	GO:0009733: response to auxin	5.04E-04
29	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	6.02E-04
30	GO:0009650: UV protection	6.66E-04
31	GO:0046739: transport of virus in multicellular host	6.66E-04
32	GO:0006168: adenine salvage	6.66E-04
33	GO:0006166: purine ribonucleoside salvage	6.66E-04
34	GO:0051639: actin filament network formation	6.66E-04
35	GO:0043481: anthocyanin accumulation in tissues in response to UV light	6.66E-04
36	GO:0042335: cuticle development	7.61E-04
37	GO:0015713: phosphoglycerate transport	8.84E-04
38	GO:0051764: actin crosslink formation	8.84E-04
39	GO:0071249: cellular response to nitrate	8.84E-04
40	GO:0006085: acetyl-CoA biosynthetic process	8.84E-04
41	GO:0006183: GTP biosynthetic process	8.84E-04
42	GO:0022622: root system development	8.84E-04
43	GO:0016042: lipid catabolic process	9.69E-04
44	GO:0006412: translation	1.10E-03
45	GO:0048359: mucilage metabolic process involved in seed coat development	1.12E-03
46	GO:0044209: AMP salvage	1.12E-03
47	GO:0006665: sphingolipid metabolic process	1.12E-03
48	GO:0009828: plant-type cell wall loosening	1.20E-03
49	GO:0035435: phosphate ion transmembrane transport	1.37E-03
50	GO:0060918: auxin transport	1.37E-03
51	GO:0009627: systemic acquired resistance	1.58E-03
52	GO:0009414: response to water deprivation	1.63E-03
53	GO:0042372: phylloquinone biosynthetic process	1.64E-03
54	GO:0009612: response to mechanical stimulus	1.64E-03
55	GO:0006694: steroid biosynthetic process	1.64E-03
56	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.64E-03
57	GO:0009734: auxin-activated signaling pathway	1.69E-03
58	GO:0009645: response to low light intensity stimulus	1.92E-03
59	GO:0032880: regulation of protein localization	1.92E-03
60	GO:0009610: response to symbiotic fungus	1.92E-03
61	GO:0048527: lateral root development	2.13E-03
62	GO:0046620: regulation of organ growth	2.22E-03
63	GO:0010497: plasmodesmata-mediated intercellular transport	2.54E-03
64	GO:0006526: arginine biosynthetic process	2.54E-03
65	GO:0009808: lignin metabolic process	2.54E-03
66	GO:0009932: cell tip growth	2.54E-03
67	GO:0006631: fatty acid metabolic process	2.76E-03
68	GO:0015780: nucleotide-sugar transport	2.87E-03
69	GO:0009640: photomorphogenesis	2.99E-03
70	GO:0042761: very long-chain fatty acid biosynthetic process	3.21E-03
71	GO:0043069: negative regulation of programmed cell death	3.57E-03
72	GO:0048829: root cap development	3.57E-03
73	GO:0009664: plant-type cell wall organization	3.75E-03
74	GO:0018119: peptidyl-cysteine S-nitrosylation	3.94E-03
75	GO:0048765: root hair cell differentiation	3.94E-03
76	GO:0010015: root morphogenesis	3.94E-03
77	GO:0016024: CDP-diacylglycerol biosynthetic process	4.32E-03
78	GO:0015706: nitrate transport	4.32E-03
79	GO:0008361: regulation of cell size	4.32E-03
80	GO:2000012: regulation of auxin polar transport	4.71E-03
81	GO:0010540: basipetal auxin transport	5.12E-03
82	GO:0010167: response to nitrate	5.54E-03
83	GO:0006071: glycerol metabolic process	5.98E-03
84	GO:0006833: water transport	5.98E-03
85	GO:0051017: actin filament bundle assembly	6.42E-03
86	GO:0000027: ribosomal large subunit assembly	6.42E-03
87	GO:0010026: trichome differentiation	6.87E-03
88	GO:0003333: amino acid transmembrane transport	7.34E-03
89	GO:0009411: response to UV	8.30E-03
90	GO:0010091: trichome branching	8.80E-03
91	GO:0048443: stamen development	8.80E-03
92	GO:0006284: base-excision repair	8.80E-03
93	GO:0008284: positive regulation of cell proliferation	9.31E-03
94	GO:0034220: ion transmembrane transport	9.83E-03
95	GO:0045490: pectin catabolic process	9.86E-03
96	GO:0006520: cellular amino acid metabolic process	1.04E-02
97	GO:0009739: response to gibberellin	1.10E-02
98	GO:0002229: defense response to oomycetes	1.20E-02
99	GO:0016132: brassinosteroid biosynthetic process	1.20E-02
100	GO:0071554: cell wall organization or biogenesis	1.20E-02
101	GO:0010583: response to cyclopentenone	1.26E-02
102	GO:0009630: gravitropism	1.26E-02
103	GO:0005975: carbohydrate metabolic process	1.32E-02
104	GO:0009639: response to red or far red light	1.38E-02
105	GO:0010027: thylakoid membrane organization	1.56E-02
106	GO:0016126: sterol biosynthetic process	1.56E-02
107	GO:0016311: dephosphorylation	1.82E-02
108	GO:0080167: response to karrikin	1.90E-02
109	GO:0010311: lateral root formation	1.95E-02
110	GO:0009813: flavonoid biosynthetic process	1.95E-02
111	GO:0010218: response to far red light	2.02E-02
112	GO:0009834: plant-type secondary cell wall biogenesis	2.02E-02
113	GO:0007568: aging	2.09E-02
114	GO:0006865: amino acid transport	2.16E-02
115	GO:0009637: response to blue light	2.23E-02
116	GO:0006869: lipid transport	2.50E-02
117	GO:0010114: response to red light	2.67E-02
118	GO:0006629: lipid metabolic process	2.81E-02
119	GO:0006281: DNA repair	2.81E-02
120	GO:0008643: carbohydrate transport	2.82E-02
121	GO:0055114: oxidation-reduction process	3.01E-02
122	GO:0042538: hyperosmotic salinity response	3.14E-02
123	GO:0009740: gibberellic acid mediated signaling pathway	4.06E-02
124	GO:0009624: response to nematode	4.24E-02
125	GO:0051726: regulation of cell cycle	4.42E-02
126	GO:0009735: response to cytokinin	4.53E-02

Rank	GO Term	Adjusted P value
1	GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity	0.00E+00
2	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
3	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
4	GO:0019146: arabinose-5-phosphate isomerase activity	0.00E+00
5	GO:0050614: delta24-sterol reductase activity	0.00E+00
6	GO:0043136: glycerol-3-phosphatase activity	0.00E+00
7	GO:0000121: glycerol-1-phosphatase activity	0.00E+00
8	GO:0047513: 1,2-alpha-L-fucosidase activity	0.00E+00
9	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.89E-06
10	GO:0016798: hydrolase activity, acting on glycosyl bonds	6.15E-06
11	GO:0019843: rRNA binding	7.56E-06
12	GO:0003735: structural constituent of ribosome	8.98E-05
13	GO:0052689: carboxylic ester hydrolase activity	9.20E-05
14	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	1.22E-04
15	GO:0000170: sphingosine hydroxylase activity	1.22E-04
16	GO:0080132: fatty acid alpha-hydroxylase activity	1.22E-04
17	GO:0015121: phosphoenolpyruvate:phosphate antiporter activity	1.22E-04
18	GO:0003993: acid phosphatase activity	2.44E-04
19	GO:0003938: IMP dehydrogenase activity	2.82E-04
20	GO:0042284: sphingolipid delta-4 desaturase activity	2.82E-04
21	GO:0016788: hydrolase activity, acting on ester bonds	4.16E-04
22	GO:0005504: fatty acid binding	4.65E-04
23	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	4.65E-04
24	GO:0030570: pectate lyase activity	6.02E-04
25	GO:0004650: polygalacturonase activity	6.62E-04
26	GO:0003999: adenine phosphoribosyltransferase activity	6.66E-04
27	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	6.66E-04
28	GO:0003878: ATP citrate synthase activity	6.66E-04
29	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	8.09E-04
30	GO:0045430: chalcone isomerase activity	8.84E-04
31	GO:0015120: phosphoglycerate transmembrane transporter activity	8.84E-04
32	GO:0010011: auxin binding	8.84E-04
33	GO:0010328: auxin influx transmembrane transporter activity	8.84E-04
34	GO:0052793: pectin acetylesterase activity	8.84E-04
35	GO:0004506: squalene monooxygenase activity	8.84E-04
36	GO:0016829: lyase activity	1.08E-03
37	GO:0008725: DNA-3-methyladenine glycosylase activity	1.12E-03
38	GO:0009922: fatty acid elongase activity	1.12E-03
39	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.27E-03
40	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	1.37E-03
41	GO:0016208: AMP binding	1.37E-03
42	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	1.37E-03
43	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	2.87E-03
44	GO:0008889: glycerophosphodiester phosphodiesterase activity	2.87E-03
45	GO:0005507: copper ion binding	4.11E-03
46	GO:0010329: auxin efflux transmembrane transporter activity	4.71E-03
47	GO:0015114: phosphate ion transmembrane transporter activity	4.71E-03
48	GO:0008083: growth factor activity	5.12E-03
49	GO:0004707: MAP kinase activity	7.34E-03
50	GO:0008514: organic anion transmembrane transporter activity	8.80E-03
51	GO:0008080: N-acetyltransferase activity	1.04E-02
52	GO:0019901: protein kinase binding	1.15E-02
53	GO:0051015: actin filament binding	1.32E-02
54	GO:0016791: phosphatase activity	1.38E-02
55	GO:0005200: structural constituent of cytoskeleton	1.44E-02
56	GO:0016413: O-acetyltransferase activity	1.50E-02
57	GO:0015250: water channel activity	1.56E-02
58	GO:0050660: flavin adenine dinucleotide binding	1.77E-02
59	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	2.02E-02
60	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.09E-02
61	GO:0015293: symporter activity	2.90E-02
62	GO:0051287: NAD binding	3.06E-02
63	GO:0003824: catalytic activity	3.08E-02
64	GO:0005215: transporter activity	3.11E-02
65	GO:0003690: double-stranded DNA binding	3.38E-02
66	GO:0003777: microtubule motor activity	3.55E-02
67	GO:0015171: amino acid transmembrane transporter activity	3.55E-02
68	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.80E-02
69	GO:0008289: lipid binding	3.90E-02
70	GO:0016746: transferase activity, transferring acyl groups	4.33E-02
71	GO:0000166: nucleotide binding	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0044391: ribosomal subunit	0.00E+00
2	GO:0009505: plant-type cell wall	3.18E-13
3	GO:0005576: extracellular region	7.58E-09
4	GO:0048046: apoplast	4.53E-07
5	GO:0031225: anchored component of membrane	3.80E-06
6	GO:0009506: plasmodesma	1.02E-05
7	GO:0005618: cell wall	3.17E-05
8	GO:0046658: anchored component of plasma membrane	3.24E-05
9	GO:0016020: membrane	8.00E-05
10	GO:0009923: fatty acid elongase complex	1.22E-04
11	GO:0005840: ribosome	4.38E-04
12	GO:0009570: chloroplast stroma	6.28E-04
13	GO:0009346: citrate lyase complex	6.66E-04
14	GO:0032432: actin filament bundle	6.66E-04
15	GO:0009986: cell surface	1.92E-03
16	GO:0045298: tubulin complex	2.87E-03
17	GO:0008180: COP9 signalosome	2.87E-03
18	GO:0005886: plasma membrane	3.77E-03
19	GO:0005884: actin filament	3.94E-03
20	GO:0030095: chloroplast photosystem II	5.12E-03
21	GO:0009654: photosystem II oxygen evolving complex	6.87E-03
22	GO:0015935: small ribosomal subunit	7.34E-03
23	GO:0009507: chloroplast	9.31E-03
24	GO:0019898: extrinsic component of membrane	1.15E-02
25	GO:0005778: peroxisomal membrane	1.44E-02
26	GO:0005783: endoplasmic reticulum	1.81E-02
27	GO:0005874: microtubule	1.83E-02
28	GO:0019005: SCF ubiquitin ligase complex	1.88E-02
29	GO:0031969: chloroplast membrane	1.90E-02
30	GO:0022625: cytosolic large ribosomal subunit	2.00E-02
31	GO:0005819: spindle	2.37E-02
32	GO:0031977: thylakoid lumen	2.52E-02
33	GO:0000502: proteasome complex	3.30E-02
34	GO:0005789: endoplasmic reticulum membrane	4.63E-02
35	GO:0022626: cytosolic ribosome	4.74E-02
36	GO:0009543: chloroplast thylakoid lumen	4.97E-02