GO Enrichment Analysis of Co-expressed Genes with
AT3G16000
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 2 | GO:0042425: choline biosynthetic process | 0.00E+00 |
| 3 | GO:0015995: chlorophyll biosynthetic process | 7.37E-06 |
| 4 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.97E-05 |
| 5 | GO:0019684: photosynthesis, light reaction | 2.37E-05 |
| 6 | GO:0015979: photosynthesis | 2.56E-05 |
| 7 | GO:0010480: microsporocyte differentiation | 2.88E-05 |
| 8 | GO:0031338: regulation of vesicle fusion | 2.88E-05 |
| 9 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 2.88E-05 |
| 10 | GO:0005980: glycogen catabolic process | 2.88E-05 |
| 11 | GO:0035304: regulation of protein dephosphorylation | 7.28E-05 |
| 12 | GO:0045493: xylan catabolic process | 1.27E-04 |
| 13 | GO:0090630: activation of GTPase activity | 1.27E-04 |
| 14 | GO:0010306: rhamnogalacturonan II biosynthetic process | 1.89E-04 |
| 15 | GO:0042938: dipeptide transport | 2.57E-04 |
| 16 | GO:0010411: xyloglucan metabolic process | 2.70E-04 |
| 17 | GO:0006656: phosphatidylcholine biosynthetic process | 3.30E-04 |
| 18 | GO:0009913: epidermal cell differentiation | 4.06E-04 |
| 19 | GO:0010190: cytochrome b6f complex assembly | 4.06E-04 |
| 20 | GO:0042549: photosystem II stabilization | 4.06E-04 |
| 21 | GO:0048528: post-embryonic root development | 5.68E-04 |
| 22 | GO:0048437: floral organ development | 5.68E-04 |
| 23 | GO:0050829: defense response to Gram-negative bacterium | 5.68E-04 |
| 24 | GO:0006353: DNA-templated transcription, termination | 6.55E-04 |
| 25 | GO:0010206: photosystem II repair | 8.35E-04 |
| 26 | GO:0006783: heme biosynthetic process | 8.35E-04 |
| 27 | GO:0009735: response to cytokinin | 9.24E-04 |
| 28 | GO:0010205: photoinhibition | 9.29E-04 |
| 29 | GO:0006779: porphyrin-containing compound biosynthetic process | 9.29E-04 |
| 30 | GO:0048229: gametophyte development | 1.13E-03 |
| 31 | GO:0015706: nitrate transport | 1.23E-03 |
| 32 | GO:0010075: regulation of meristem growth | 1.34E-03 |
| 33 | GO:0010207: photosystem II assembly | 1.45E-03 |
| 34 | GO:0009266: response to temperature stimulus | 1.45E-03 |
| 35 | GO:0009934: regulation of meristem structural organization | 1.45E-03 |
| 36 | GO:0007017: microtubule-based process | 1.92E-03 |
| 37 | GO:0016998: cell wall macromolecule catabolic process | 2.04E-03 |
| 38 | GO:0009860: pollen tube growth | 2.52E-03 |
| 39 | GO:0048653: anther development | 2.70E-03 |
| 40 | GO:0048868: pollen tube development | 2.84E-03 |
| 41 | GO:0048825: cotyledon development | 3.13E-03 |
| 42 | GO:0010183: pollen tube guidance | 3.13E-03 |
| 43 | GO:0000302: response to reactive oxygen species | 3.28E-03 |
| 44 | GO:0010193: response to ozone | 3.28E-03 |
| 45 | GO:0016311: dephosphorylation | 4.88E-03 |
| 46 | GO:0000160: phosphorelay signal transduction system | 5.22E-03 |
| 47 | GO:0007568: aging | 5.58E-03 |
| 48 | GO:0016051: carbohydrate biosynthetic process | 5.94E-03 |
| 49 | GO:0034599: cellular response to oxidative stress | 6.13E-03 |
| 50 | GO:0042546: cell wall biogenesis | 7.28E-03 |
| 51 | GO:0009736: cytokinin-activated signaling pathway | 8.71E-03 |
| 52 | GO:0010224: response to UV-B | 8.92E-03 |
| 53 | GO:0006857: oligopeptide transport | 9.14E-03 |
| 54 | GO:0042545: cell wall modification | 1.09E-02 |
| 55 | GO:0009845: seed germination | 1.38E-02 |
| 56 | GO:0042744: hydrogen peroxide catabolic process | 1.43E-02 |
| 57 | GO:0071555: cell wall organization | 1.53E-02 |
| 58 | GO:0042742: defense response to bacterium | 1.53E-02 |
| 59 | GO:0045490: pectin catabolic process | 1.64E-02 |
| 60 | GO:0009826: unidimensional cell growth | 2.18E-02 |
| 61 | GO:0046686: response to cadmium ion | 2.38E-02 |
| 62 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.67E-02 |
| 63 | GO:0045892: negative regulation of transcription, DNA-templated | 3.00E-02 |
| 64 | GO:0006886: intracellular protein transport | 3.04E-02 |
| 65 | GO:0032259: methylation | 3.34E-02 |
| 66 | GO:0006629: lipid metabolic process | 3.45E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 2 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 3 | GO:0004645: phosphorylase activity | 2.88E-05 |
| 4 | GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity | 2.88E-05 |
| 5 | GO:0008184: glycogen phosphorylase activity | 2.88E-05 |
| 6 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 2.88E-05 |
| 7 | GO:0010242: oxygen evolving activity | 2.88E-05 |
| 8 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 2.88E-05 |
| 9 | GO:0004853: uroporphyrinogen decarboxylase activity | 2.88E-05 |
| 10 | GO:0008266: poly(U) RNA binding | 3.80E-05 |
| 11 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 7.28E-05 |
| 12 | GO:0016851: magnesium chelatase activity | 1.89E-04 |
| 13 | GO:0009044: xylan 1,4-beta-xylosidase activity | 2.57E-04 |
| 14 | GO:0046556: alpha-L-arabinofuranosidase activity | 2.57E-04 |
| 15 | GO:0042936: dipeptide transporter activity | 2.57E-04 |
| 16 | GO:0017137: Rab GTPase binding | 3.30E-04 |
| 17 | GO:0004130: cytochrome-c peroxidase activity | 4.06E-04 |
| 18 | GO:0015020: glucuronosyltransferase activity | 1.03E-03 |
| 19 | GO:0047372: acylglycerol lipase activity | 1.13E-03 |
| 20 | GO:0033612: receptor serine/threonine kinase binding | 2.04E-03 |
| 21 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 3.28E-03 |
| 22 | GO:0000156: phosphorelay response regulator activity | 3.58E-03 |
| 23 | GO:0005200: structural constituent of cytoskeleton | 3.89E-03 |
| 24 | GO:0008375: acetylglucosaminyltransferase activity | 4.54E-03 |
| 25 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 4.71E-03 |
| 26 | GO:0005096: GTPase activator activity | 5.22E-03 |
| 27 | GO:0005515: protein binding | 5.51E-03 |
| 28 | GO:0008289: lipid binding | 5.89E-03 |
| 29 | GO:0003993: acid phosphatase activity | 6.13E-03 |
| 30 | GO:0045330: aspartyl esterase activity | 9.36E-03 |
| 31 | GO:0030599: pectinesterase activity | 1.07E-02 |
| 32 | GO:0030170: pyridoxal phosphate binding | 1.41E-02 |
| 33 | GO:0005509: calcium ion binding | 1.41E-02 |
| 34 | GO:0046910: pectinesterase inhibitor activity | 1.56E-02 |
| 35 | GO:0008168: methyltransferase activity | 2.18E-02 |
| 36 | GO:0004601: peroxidase activity | 2.24E-02 |
| 37 | GO:0003924: GTPase activity | 3.45E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 2 | GO:0009534: chloroplast thylakoid | 1.96E-18 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 9.58E-15 |
| 4 | GO:0009507: chloroplast | 1.97E-11 |
| 5 | GO:0009579: thylakoid | 6.17E-10 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 7.26E-10 |
| 7 | GO:0031977: thylakoid lumen | 3.42E-09 |
| 8 | GO:0009538: photosystem I reaction center | 2.72E-08 |
| 9 | GO:0030095: chloroplast photosystem II | 3.03E-07 |
| 10 | GO:0010287: plastoglobule | 2.25E-06 |
| 11 | GO:0009654: photosystem II oxygen evolving complex | 6.29E-05 |
| 12 | GO:0010007: magnesium chelatase complex | 1.27E-04 |
| 13 | GO:0019898: extrinsic component of membrane | 1.44E-04 |
| 14 | GO:0009941: chloroplast envelope | 1.69E-04 |
| 15 | GO:0055035: plastid thylakoid membrane | 3.30E-04 |
| 16 | GO:0009570: chloroplast stroma | 3.51E-04 |
| 17 | GO:0045298: tubulin complex | 8.35E-04 |
| 18 | GO:0048046: apoplast | 2.73E-03 |
| 19 | GO:0005618: cell wall | 3.11E-03 |
| 20 | GO:0071944: cell periphery | 3.58E-03 |
| 21 | GO:0016020: membrane | 7.61E-03 |
| 22 | GO:0012505: endomembrane system | 1.09E-02 |
| 23 | GO:0009706: chloroplast inner membrane | 1.12E-02 |
| 24 | GO:0005622: intracellular | 1.34E-02 |
| 25 | GO:0009505: plant-type cell wall | 1.91E-02 |
| 26 | GO:0016021: integral component of membrane | 2.32E-02 |
| 27 | GO:0005874: microtubule | 2.55E-02 |