GO Enrichment Analysis of Co-expressed Genes with
AT3G15900
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene | 0.00E+00 |
| 2 | GO:0090393: sepal giant cell development | 0.00E+00 |
| 3 | GO:0036172: thiamine salvage | 0.00E+00 |
| 4 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 5 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 6 | GO:0031022: nuclear migration along microfilament | 1.89E-06 |
| 7 | GO:0006546: glycine catabolic process | 8.50E-06 |
| 8 | GO:0019464: glycine decarboxylation via glycine cleavage system | 8.50E-06 |
| 9 | GO:0009903: chloroplast avoidance movement | 3.05E-05 |
| 10 | GO:0016559: peroxisome fission | 5.40E-05 |
| 11 | GO:0006659: phosphatidylserine biosynthetic process | 9.69E-05 |
| 12 | GO:0080093: regulation of photorespiration | 9.69E-05 |
| 13 | GO:0031998: regulation of fatty acid beta-oxidation | 9.69E-05 |
| 14 | GO:1902265: abscisic acid homeostasis | 9.69E-05 |
| 15 | GO:0006094: gluconeogenesis | 1.93E-04 |
| 16 | GO:0019253: reductive pentose-phosphate cycle | 2.19E-04 |
| 17 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 2.28E-04 |
| 18 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 2.28E-04 |
| 19 | GO:0007031: peroxisome organization | 2.48E-04 |
| 20 | GO:0044375: regulation of peroxisome size | 3.80E-04 |
| 21 | GO:0005977: glycogen metabolic process | 3.80E-04 |
| 22 | GO:0006011: UDP-glucose metabolic process | 3.80E-04 |
| 23 | GO:0000913: preprophase band assembly | 3.80E-04 |
| 24 | GO:0006000: fructose metabolic process | 3.80E-04 |
| 25 | GO:0080092: regulation of pollen tube growth | 4.10E-04 |
| 26 | GO:0032877: positive regulation of DNA endoreduplication | 5.46E-04 |
| 27 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 5.46E-04 |
| 28 | GO:0042823: pyridoxal phosphate biosynthetic process | 5.46E-04 |
| 29 | GO:0016556: mRNA modification | 5.46E-04 |
| 30 | GO:0006021: inositol biosynthetic process | 7.26E-04 |
| 31 | GO:0009902: chloroplast relocation | 7.26E-04 |
| 32 | GO:0031122: cytoplasmic microtubule organization | 7.26E-04 |
| 33 | GO:0009904: chloroplast accumulation movement | 9.17E-04 |
| 34 | GO:0006097: glyoxylate cycle | 9.17E-04 |
| 35 | GO:0009229: thiamine diphosphate biosynthetic process | 9.17E-04 |
| 36 | GO:0016120: carotene biosynthetic process | 9.17E-04 |
| 37 | GO:0043097: pyrimidine nucleoside salvage | 9.17E-04 |
| 38 | GO:0010942: positive regulation of cell death | 1.12E-03 |
| 39 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 1.12E-03 |
| 40 | GO:0070814: hydrogen sulfide biosynthetic process | 1.12E-03 |
| 41 | GO:0006206: pyrimidine nucleobase metabolic process | 1.12E-03 |
| 42 | GO:0009228: thiamine biosynthetic process | 1.12E-03 |
| 43 | GO:0006458: 'de novo' protein folding | 1.34E-03 |
| 44 | GO:0017148: negative regulation of translation | 1.34E-03 |
| 45 | GO:0009854: oxidative photosynthetic carbon pathway | 1.34E-03 |
| 46 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 1.34E-03 |
| 47 | GO:0042026: protein refolding | 1.34E-03 |
| 48 | GO:0009658: chloroplast organization | 1.71E-03 |
| 49 | GO:0009853: photorespiration | 1.72E-03 |
| 50 | GO:0009704: de-etiolation | 1.81E-03 |
| 51 | GO:0052543: callose deposition in cell wall | 1.81E-03 |
| 52 | GO:0048564: photosystem I assembly | 1.81E-03 |
| 53 | GO:0008610: lipid biosynthetic process | 1.81E-03 |
| 54 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 1.81E-03 |
| 55 | GO:0006810: transport | 1.93E-03 |
| 56 | GO:0006002: fructose 6-phosphate metabolic process | 2.07E-03 |
| 57 | GO:0071482: cellular response to light stimulus | 2.07E-03 |
| 58 | GO:0009657: plastid organization | 2.07E-03 |
| 59 | GO:0046686: response to cadmium ion | 2.14E-03 |
| 60 | GO:0000373: Group II intron splicing | 2.33E-03 |
| 61 | GO:0000902: cell morphogenesis | 2.33E-03 |
| 62 | GO:0006098: pentose-phosphate shunt | 2.33E-03 |
| 63 | GO:0000103: sulfate assimilation | 2.90E-03 |
| 64 | GO:0010192: mucilage biosynthetic process | 2.90E-03 |
| 65 | GO:0009970: cellular response to sulfate starvation | 2.90E-03 |
| 66 | GO:0019538: protein metabolic process | 2.90E-03 |
| 67 | GO:0018119: peptidyl-cysteine S-nitrosylation | 3.20E-03 |
| 68 | GO:0009773: photosynthetic electron transport in photosystem I | 3.20E-03 |
| 69 | GO:0006415: translational termination | 3.20E-03 |
| 70 | GO:0006108: malate metabolic process | 3.82E-03 |
| 71 | GO:0009767: photosynthetic electron transport chain | 3.82E-03 |
| 72 | GO:0005986: sucrose biosynthetic process | 3.82E-03 |
| 73 | GO:0030048: actin filament-based movement | 3.82E-03 |
| 74 | GO:0042343: indole glucosinolate metabolic process | 4.49E-03 |
| 75 | GO:0006636: unsaturated fatty acid biosynthetic process | 4.83E-03 |
| 76 | GO:0009833: plant-type primary cell wall biogenesis | 4.83E-03 |
| 77 | GO:0006833: water transport | 4.83E-03 |
| 78 | GO:0098542: defense response to other organism | 5.93E-03 |
| 79 | GO:0061077: chaperone-mediated protein folding | 5.93E-03 |
| 80 | GO:0030433: ubiquitin-dependent ERAD pathway | 6.31E-03 |
| 81 | GO:0006730: one-carbon metabolic process | 6.31E-03 |
| 82 | GO:0016226: iron-sulfur cluster assembly | 6.31E-03 |
| 83 | GO:0016117: carotenoid biosynthetic process | 7.51E-03 |
| 84 | GO:0034220: ion transmembrane transport | 7.93E-03 |
| 85 | GO:0042631: cellular response to water deprivation | 7.93E-03 |
| 86 | GO:0006520: cellular amino acid metabolic process | 8.35E-03 |
| 87 | GO:0007018: microtubule-based movement | 8.79E-03 |
| 88 | GO:0007059: chromosome segregation | 8.79E-03 |
| 89 | GO:0019252: starch biosynthetic process | 9.23E-03 |
| 90 | GO:0008654: phospholipid biosynthetic process | 9.23E-03 |
| 91 | GO:0009791: post-embryonic development | 9.23E-03 |
| 92 | GO:0016032: viral process | 1.01E-02 |
| 93 | GO:0007264: small GTPase mediated signal transduction | 1.01E-02 |
| 94 | GO:0010583: response to cyclopentenone | 1.01E-02 |
| 95 | GO:0010090: trichome morphogenesis | 1.06E-02 |
| 96 | GO:0051607: defense response to virus | 1.20E-02 |
| 97 | GO:0000910: cytokinesis | 1.20E-02 |
| 98 | GO:0007049: cell cycle | 1.25E-02 |
| 99 | GO:0009723: response to ethylene | 1.30E-02 |
| 100 | GO:0010029: regulation of seed germination | 1.30E-02 |
| 101 | GO:0080167: response to karrikin | 1.39E-02 |
| 102 | GO:0055114: oxidation-reduction process | 1.40E-02 |
| 103 | GO:0030244: cellulose biosynthetic process | 1.51E-02 |
| 104 | GO:0009832: plant-type cell wall biogenesis | 1.57E-02 |
| 105 | GO:0016051: carbohydrate biosynthetic process | 1.79E-02 |
| 106 | GO:0009637: response to blue light | 1.79E-02 |
| 107 | GO:0006099: tricarboxylic acid cycle | 1.85E-02 |
| 108 | GO:0042742: defense response to bacterium | 1.86E-02 |
| 109 | GO:0000209: protein polyubiquitination | 2.20E-02 |
| 110 | GO:0006417: regulation of translation | 2.85E-02 |
| 111 | GO:0006096: glycolytic process | 2.99E-02 |
| 112 | GO:0005975: carbohydrate metabolic process | 3.14E-02 |
| 113 | GO:0009735: response to cytokinin | 3.34E-02 |
| 114 | GO:0006396: RNA processing | 3.48E-02 |
| 115 | GO:0051726: regulation of cell cycle | 3.55E-02 |
| 116 | GO:0051301: cell division | 3.98E-02 |
| 117 | GO:0009058: biosynthetic process | 4.15E-02 |
| 118 | GO:0006457: protein folding | 4.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 2 | GO:0008962: phosphatidylglycerophosphatase activity | 0.00E+00 |
| 3 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 4 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 5 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 6 | GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity | 0.00E+00 |
| 7 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 8 | GO:0004417: hydroxyethylthiazole kinase activity | 0.00E+00 |
| 9 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 10 | GO:0016719: carotene 7,8-desaturase activity | 0.00E+00 |
| 11 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 12 | GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity | 0.00E+00 |
| 13 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 14 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 4.47E-06 |
| 15 | GO:0008568: microtubule-severing ATPase activity | 9.69E-05 |
| 16 | GO:0010313: phytochrome binding | 9.69E-05 |
| 17 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.44E-04 |
| 18 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 2.28E-04 |
| 19 | GO:0004512: inositol-3-phosphate synthase activity | 2.28E-04 |
| 20 | GO:0004781: sulfate adenylyltransferase (ATP) activity | 3.80E-04 |
| 21 | GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity | 3.80E-04 |
| 22 | GO:0032947: protein complex scaffold | 3.80E-04 |
| 23 | GO:0004148: dihydrolipoyl dehydrogenase activity | 3.80E-04 |
| 24 | GO:0016149: translation release factor activity, codon specific | 5.46E-04 |
| 25 | GO:0048027: mRNA 5'-UTR binding | 5.46E-04 |
| 26 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 7.26E-04 |
| 27 | GO:0008453: alanine-glyoxylate transaminase activity | 7.26E-04 |
| 28 | GO:0048038: quinone binding | 7.47E-04 |
| 29 | GO:0016787: hydrolase activity | 9.76E-04 |
| 30 | GO:0000210: NAD+ diphosphatase activity | 1.12E-03 |
| 31 | GO:0016615: malate dehydrogenase activity | 1.12E-03 |
| 32 | GO:0080030: methyl indole-3-acetate esterase activity | 1.12E-03 |
| 33 | GO:0004332: fructose-bisphosphate aldolase activity | 1.12E-03 |
| 34 | GO:0042578: phosphoric ester hydrolase activity | 1.12E-03 |
| 35 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.34E-03 |
| 36 | GO:0030060: L-malate dehydrogenase activity | 1.34E-03 |
| 37 | GO:0004849: uridine kinase activity | 1.34E-03 |
| 38 | GO:0016788: hydrolase activity, acting on ester bonds | 1.75E-03 |
| 39 | GO:0003747: translation release factor activity | 2.33E-03 |
| 40 | GO:0047617: acyl-CoA hydrolase activity | 2.61E-03 |
| 41 | GO:0044183: protein binding involved in protein folding | 3.20E-03 |
| 42 | GO:0004860: protein kinase inhibitor activity | 3.20E-03 |
| 43 | GO:0008081: phosphoric diester hydrolase activity | 3.82E-03 |
| 44 | GO:0004089: carbonate dehydratase activity | 3.82E-03 |
| 45 | GO:0031072: heat shock protein binding | 3.82E-03 |
| 46 | GO:0008266: poly(U) RNA binding | 4.15E-03 |
| 47 | GO:0051082: unfolded protein binding | 4.20E-03 |
| 48 | GO:0003824: catalytic activity | 5.04E-03 |
| 49 | GO:0051536: iron-sulfur cluster binding | 5.19E-03 |
| 50 | GO:0016760: cellulose synthase (UDP-forming) activity | 6.70E-03 |
| 51 | GO:0003756: protein disulfide isomerase activity | 7.10E-03 |
| 52 | GO:0042802: identical protein binding | 9.20E-03 |
| 53 | GO:0019901: protein kinase binding | 9.23E-03 |
| 54 | GO:0004518: nuclease activity | 1.01E-02 |
| 55 | GO:0016759: cellulose synthase activity | 1.11E-02 |
| 56 | GO:0015250: water channel activity | 1.25E-02 |
| 57 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.62E-02 |
| 58 | GO:0004222: metalloendopeptidase activity | 1.62E-02 |
| 59 | GO:0050897: cobalt ion binding | 1.68E-02 |
| 60 | GO:0005198: structural molecule activity | 2.33E-02 |
| 61 | GO:0051287: NAD binding | 2.46E-02 |
| 62 | GO:0003777: microtubule motor activity | 2.85E-02 |
| 63 | GO:0031625: ubiquitin protein ligase binding | 2.85E-02 |
| 64 | GO:0016887: ATPase activity | 3.19E-02 |
| 65 | GO:0016758: transferase activity, transferring hexosyl groups | 3.92E-02 |
| 66 | GO:0019843: rRNA binding | 4.00E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042579: microbody | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 2.59E-18 |
| 3 | GO:0009570: chloroplast stroma | 2.71E-08 |
| 4 | GO:0009941: chloroplast envelope | 3.21E-07 |
| 5 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.02E-06 |
| 6 | GO:0005960: glycine cleavage complex | 4.47E-06 |
| 7 | GO:0048046: apoplast | 4.06E-05 |
| 8 | GO:0009535: chloroplast thylakoid membrane | 4.90E-05 |
| 9 | GO:0005777: peroxisome | 5.24E-05 |
| 10 | GO:0005779: integral component of peroxisomal membrane | 6.86E-05 |
| 11 | GO:0009344: nitrite reductase complex [NAD(P)H] | 9.69E-05 |
| 12 | GO:0009509: chromoplast | 3.80E-04 |
| 13 | GO:0009534: chloroplast thylakoid | 3.97E-04 |
| 14 | GO:0005778: peroxisomal membrane | 9.50E-04 |
| 15 | GO:0005819: spindle | 1.88E-03 |
| 16 | GO:0016324: apical plasma membrane | 2.90E-03 |
| 17 | GO:0005765: lysosomal membrane | 3.20E-03 |
| 18 | GO:0009508: plastid chromosome | 3.82E-03 |
| 19 | GO:0019013: viral nucleocapsid | 3.82E-03 |
| 20 | GO:0030095: chloroplast photosystem II | 4.15E-03 |
| 21 | GO:0009543: chloroplast thylakoid lumen | 5.25E-03 |
| 22 | GO:0005623: cell | 5.39E-03 |
| 23 | GO:0009654: photosystem II oxygen evolving complex | 5.55E-03 |
| 24 | GO:0005871: kinesin complex | 7.51E-03 |
| 25 | GO:0019898: extrinsic component of membrane | 9.23E-03 |
| 26 | GO:0009504: cell plate | 9.23E-03 |
| 27 | GO:0009579: thylakoid | 9.56E-03 |
| 28 | GO:0005694: chromosome | 1.01E-02 |
| 29 | GO:0010319: stromule | 1.16E-02 |
| 30 | GO:0009295: nucleoid | 1.16E-02 |
| 31 | GO:0030529: intracellular ribonucleoprotein complex | 1.25E-02 |
| 32 | GO:0009707: chloroplast outer membrane | 1.51E-02 |
| 33 | GO:0031902: late endosome membrane | 2.02E-02 |
| 34 | GO:0031977: thylakoid lumen | 2.02E-02 |
| 35 | GO:0005747: mitochondrial respiratory chain complex I | 3.05E-02 |
| 36 | GO:0005829: cytosol | 3.21E-02 |
| 37 | GO:0009706: chloroplast inner membrane | 3.41E-02 |
| 38 | GO:0010287: plastoglobule | 3.85E-02 |
| 39 | GO:0009524: phragmoplast | 4.15E-02 |
| 40 | GO:0005759: mitochondrial matrix | 4.70E-02 |