GO Enrichment Analysis of Co-expressed Genes with
AT3G15352
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006337: nucleosome disassembly | 0.00E+00 |
| 2 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 3 | GO:0090069: regulation of ribosome biogenesis | 0.00E+00 |
| 4 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 5 | GO:0042430: indole-containing compound metabolic process | 0.00E+00 |
| 6 | GO:0030149: sphingolipid catabolic process | 0.00E+00 |
| 7 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 8 | GO:0046686: response to cadmium ion | 2.14E-08 |
| 9 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 5.86E-07 |
| 10 | GO:2000232: regulation of rRNA processing | 1.06E-04 |
| 11 | GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine | 1.06E-04 |
| 12 | GO:0019752: carboxylic acid metabolic process | 2.48E-04 |
| 13 | GO:0031648: protein destabilization | 2.48E-04 |
| 14 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 2.48E-04 |
| 15 | GO:0010167: response to nitrate | 2.81E-04 |
| 16 | GO:0034976: response to endoplasmic reticulum stress | 3.14E-04 |
| 17 | GO:0000027: ribosomal large subunit assembly | 3.49E-04 |
| 18 | GO:0030150: protein import into mitochondrial matrix | 3.49E-04 |
| 19 | GO:0006364: rRNA processing | 3.76E-04 |
| 20 | GO:0006486: protein glycosylation | 3.76E-04 |
| 21 | GO:0045039: protein import into mitochondrial inner membrane | 4.12E-04 |
| 22 | GO:0043044: ATP-dependent chromatin remodeling | 4.12E-04 |
| 23 | GO:0015031: protein transport | 4.43E-04 |
| 24 | GO:0045454: cell redox homeostasis | 5.59E-04 |
| 25 | GO:0001676: long-chain fatty acid metabolic process | 5.92E-04 |
| 26 | GO:0048194: Golgi vesicle budding | 5.92E-04 |
| 27 | GO:0046345: abscisic acid catabolic process | 7.86E-04 |
| 28 | GO:0000460: maturation of 5.8S rRNA | 7.86E-04 |
| 29 | GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA | 7.86E-04 |
| 30 | GO:0010188: response to microbial phytotoxin | 7.86E-04 |
| 31 | GO:0006564: L-serine biosynthetic process | 9.92E-04 |
| 32 | GO:0031365: N-terminal protein amino acid modification | 9.92E-04 |
| 33 | GO:0000470: maturation of LSU-rRNA | 1.21E-03 |
| 34 | GO:0043248: proteasome assembly | 1.21E-03 |
| 35 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 1.21E-03 |
| 36 | GO:0010405: arabinogalactan protein metabolic process | 1.21E-03 |
| 37 | GO:1901001: negative regulation of response to salt stress | 1.45E-03 |
| 38 | GO:1900056: negative regulation of leaf senescence | 1.70E-03 |
| 39 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 1.97E-03 |
| 40 | GO:0006491: N-glycan processing | 1.97E-03 |
| 41 | GO:0006098: pentose-phosphate shunt | 2.53E-03 |
| 42 | GO:0006189: 'de novo' IMP biosynthetic process | 2.53E-03 |
| 43 | GO:0006457: protein folding | 2.68E-03 |
| 44 | GO:0016192: vesicle-mediated transport | 2.80E-03 |
| 45 | GO:0030042: actin filament depolymerization | 2.84E-03 |
| 46 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 2.84E-03 |
| 47 | GO:0010162: seed dormancy process | 3.15E-03 |
| 48 | GO:0016485: protein processing | 3.47E-03 |
| 49 | GO:0015706: nitrate transport | 3.81E-03 |
| 50 | GO:0071365: cellular response to auxin stimulus | 3.81E-03 |
| 51 | GO:0006626: protein targeting to mitochondrion | 4.16E-03 |
| 52 | GO:0006094: gluconeogenesis | 4.16E-03 |
| 53 | GO:0009553: embryo sac development | 4.61E-03 |
| 54 | GO:0006338: chromatin remodeling | 5.65E-03 |
| 55 | GO:0009944: polarity specification of adaxial/abaxial axis | 5.65E-03 |
| 56 | GO:0006334: nucleosome assembly | 6.46E-03 |
| 57 | GO:0007005: mitochondrion organization | 6.87E-03 |
| 58 | GO:0031348: negative regulation of defense response | 6.87E-03 |
| 59 | GO:0009294: DNA mediated transformation | 7.30E-03 |
| 60 | GO:0019722: calcium-mediated signaling | 7.74E-03 |
| 61 | GO:0006520: cellular amino acid metabolic process | 9.10E-03 |
| 62 | GO:0006662: glycerol ether metabolic process | 9.10E-03 |
| 63 | GO:0048868: pollen tube development | 9.10E-03 |
| 64 | GO:0009651: response to salt stress | 1.02E-02 |
| 65 | GO:0010193: response to ozone | 1.06E-02 |
| 66 | GO:0006635: fatty acid beta-oxidation | 1.06E-02 |
| 67 | GO:0007264: small GTPase mediated signal transduction | 1.11E-02 |
| 68 | GO:0030163: protein catabolic process | 1.16E-02 |
| 69 | GO:0009567: double fertilization forming a zygote and endosperm | 1.21E-02 |
| 70 | GO:0006464: cellular protein modification process | 1.21E-02 |
| 71 | GO:0010286: heat acclimation | 1.26E-02 |
| 72 | GO:0042254: ribosome biogenesis | 1.30E-02 |
| 73 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.32E-02 |
| 74 | GO:0007049: cell cycle | 1.42E-02 |
| 75 | GO:0042128: nitrate assimilation | 1.48E-02 |
| 76 | GO:0016049: cell growth | 1.59E-02 |
| 77 | GO:0048527: lateral root development | 1.83E-02 |
| 78 | GO:0006886: intracellular protein transport | 1.95E-02 |
| 79 | GO:0045087: innate immune response | 1.95E-02 |
| 80 | GO:0034599: cellular response to oxidative stress | 2.02E-02 |
| 81 | GO:0006979: response to oxidative stress | 2.20E-02 |
| 82 | GO:0006631: fatty acid metabolic process | 2.21E-02 |
| 83 | GO:0000154: rRNA modification | 2.54E-02 |
| 84 | GO:0008152: metabolic process | 2.57E-02 |
| 85 | GO:0009846: pollen germination | 2.75E-02 |
| 86 | GO:0009909: regulation of flower development | 3.11E-02 |
| 87 | GO:0006096: glycolytic process | 3.26E-02 |
| 88 | GO:0016569: covalent chromatin modification | 3.56E-02 |
| 89 | GO:0006396: RNA processing | 3.80E-02 |
| 90 | GO:0000398: mRNA splicing, via spliceosome | 4.12E-02 |
| 91 | GO:0009555: pollen development | 4.13E-02 |
| 92 | GO:0051301: cell division | 4.49E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008117: sphinganine-1-phosphate aldolase activity | 0.00E+00 |
| 2 | GO:0004164: diphthine synthase activity | 0.00E+00 |
| 3 | GO:0051670: inulinase activity | 0.00E+00 |
| 4 | GO:0000166: nucleotide binding | 4.90E-06 |
| 5 | GO:0030515: snoRNA binding | 4.78E-05 |
| 6 | GO:0008320: protein transmembrane transporter activity | 4.78E-05 |
| 7 | GO:0051669: fructan beta-fructosidase activity | 1.06E-04 |
| 8 | GO:0031219: levanase activity | 1.06E-04 |
| 9 | GO:0042134: rRNA primary transcript binding | 1.06E-04 |
| 10 | GO:0004638: phosphoribosylaminoimidazole carboxylase activity | 1.06E-04 |
| 11 | GO:0003746: translation elongation factor activity | 1.78E-04 |
| 12 | GO:0004617: phosphoglycerate dehydrogenase activity | 2.48E-04 |
| 13 | GO:0043021: ribonucleoprotein complex binding | 2.48E-04 |
| 14 | GO:0000774: adenyl-nucleotide exchange factor activity | 2.48E-04 |
| 15 | GO:0048531: beta-1,3-galactosyltransferase activity | 2.48E-04 |
| 16 | GO:0005093: Rab GDP-dissociation inhibitor activity | 4.12E-04 |
| 17 | GO:0003756: protein disulfide isomerase activity | 5.47E-04 |
| 18 | GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | 5.92E-04 |
| 19 | GO:0031386: protein tag | 9.92E-04 |
| 20 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 1.21E-03 |
| 21 | GO:0004332: fructose-bisphosphate aldolase activity | 1.21E-03 |
| 22 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 1.21E-03 |
| 23 | GO:0102391: decanoate--CoA ligase activity | 1.45E-03 |
| 24 | GO:0004012: phospholipid-translocating ATPase activity | 1.45E-03 |
| 25 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.45E-03 |
| 26 | GO:0004559: alpha-mannosidase activity | 1.45E-03 |
| 27 | GO:0016831: carboxy-lyase activity | 1.70E-03 |
| 28 | GO:0008235: metalloexopeptidase activity | 1.70E-03 |
| 29 | GO:0004467: long-chain fatty acid-CoA ligase activity | 1.70E-03 |
| 30 | GO:0008135: translation factor activity, RNA binding | 2.24E-03 |
| 31 | GO:0015112: nitrate transmembrane transporter activity | 2.84E-03 |
| 32 | GO:0008794: arsenate reductase (glutaredoxin) activity | 3.47E-03 |
| 33 | GO:0004177: aminopeptidase activity | 3.47E-03 |
| 34 | GO:0008378: galactosyltransferase activity | 3.81E-03 |
| 35 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 4.16E-03 |
| 36 | GO:0051082: unfolded protein binding | 4.75E-03 |
| 37 | GO:0003712: transcription cofactor activity | 4.88E-03 |
| 38 | GO:0004190: aspartic-type endopeptidase activity | 4.88E-03 |
| 39 | GO:0015035: protein disulfide oxidoreductase activity | 4.89E-03 |
| 40 | GO:0004407: histone deacetylase activity | 5.65E-03 |
| 41 | GO:0005528: FK506 binding | 5.65E-03 |
| 42 | GO:0031418: L-ascorbic acid binding | 5.65E-03 |
| 43 | GO:0016758: transferase activity, transferring hexosyl groups | 5.78E-03 |
| 44 | GO:0051087: chaperone binding | 6.05E-03 |
| 45 | GO:0016887: ATPase activity | 7.50E-03 |
| 46 | GO:0047134: protein-disulfide reductase activity | 8.19E-03 |
| 47 | GO:0004527: exonuclease activity | 9.10E-03 |
| 48 | GO:0003713: transcription coactivator activity | 9.10E-03 |
| 49 | GO:0004791: thioredoxin-disulfide reductase activity | 9.58E-03 |
| 50 | GO:0016853: isomerase activity | 9.58E-03 |
| 51 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.16E-02 |
| 52 | GO:0016597: amino acid binding | 1.31E-02 |
| 53 | GO:0004721: phosphoprotein phosphatase activity | 1.54E-02 |
| 54 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.65E-02 |
| 55 | GO:0005525: GTP binding | 1.68E-02 |
| 56 | GO:0005096: GTPase activator activity | 1.71E-02 |
| 57 | GO:0005515: protein binding | 1.72E-02 |
| 58 | GO:0050897: cobalt ion binding | 1.83E-02 |
| 59 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.95E-02 |
| 60 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 2.08E-02 |
| 61 | GO:0042393: histone binding | 2.14E-02 |
| 62 | GO:0005198: structural molecule activity | 2.54E-02 |
| 63 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.61E-02 |
| 64 | GO:0051287: NAD binding | 2.68E-02 |
| 65 | GO:0005524: ATP binding | 2.80E-02 |
| 66 | GO:0016298: lipase activity | 2.97E-02 |
| 67 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 3.49E-02 |
| 68 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 3.49E-02 |
| 69 | GO:0003779: actin binding | 3.64E-02 |
| 70 | GO:0016829: lyase activity | 4.61E-02 |
| 71 | GO:0030170: pyridoxal phosphate binding | 4.70E-02 |
| 72 | GO:0008565: protein transporter activity | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 2 | GO:0034457: Mpp10 complex | 0.00E+00 |
| 3 | GO:0034455: t-UTP complex | 0.00E+00 |
| 4 | GO:0005730: nucleolus | 1.77E-10 |
| 5 | GO:0070545: PeBoW complex | 5.86E-07 |
| 6 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.74E-05 |
| 7 | GO:0001405: presequence translocase-associated import motor | 1.06E-04 |
| 8 | GO:0005759: mitochondrial matrix | 1.23E-04 |
| 9 | GO:0005829: cytosol | 1.41E-04 |
| 10 | GO:0032040: small-subunit processome | 1.91E-04 |
| 11 | GO:0030134: ER to Golgi transport vesicle | 2.48E-04 |
| 12 | GO:0030089: phycobilisome | 2.48E-04 |
| 13 | GO:0005783: endoplasmic reticulum | 4.48E-04 |
| 14 | GO:0000228: nuclear chromosome | 9.92E-04 |
| 15 | GO:0032580: Golgi cisterna membrane | 1.01E-03 |
| 16 | GO:0031428: box C/D snoRNP complex | 1.21E-03 |
| 17 | GO:0016363: nuclear matrix | 1.45E-03 |
| 18 | GO:0005801: cis-Golgi network | 1.45E-03 |
| 19 | GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane | 1.70E-03 |
| 20 | GO:0030687: preribosome, large subunit precursor | 1.70E-03 |
| 21 | GO:0009506: plasmodesma | 2.35E-03 |
| 22 | GO:0015030: Cajal body | 2.84E-03 |
| 23 | GO:0005852: eukaryotic translation initiation factor 3 complex | 3.47E-03 |
| 24 | GO:0008541: proteasome regulatory particle, lid subcomplex | 3.47E-03 |
| 25 | GO:0019013: viral nucleocapsid | 4.16E-03 |
| 26 | GO:0005618: cell wall | 4.20E-03 |
| 27 | GO:0005834: heterotrimeric G-protein complex | 4.21E-03 |
| 28 | GO:0005794: Golgi apparatus | 5.08E-03 |
| 29 | GO:0005758: mitochondrial intermembrane space | 5.65E-03 |
| 30 | GO:0005654: nucleoplasm | 5.78E-03 |
| 31 | GO:0015629: actin cytoskeleton | 7.30E-03 |
| 32 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 7.74E-03 |
| 33 | GO:0005789: endoplasmic reticulum membrane | 1.01E-02 |
| 34 | GO:0005774: vacuolar membrane | 1.08E-02 |
| 35 | GO:0030529: intracellular ribonucleoprotein complex | 1.37E-02 |
| 36 | GO:0000932: P-body | 1.37E-02 |
| 37 | GO:0005788: endoplasmic reticulum lumen | 1.42E-02 |
| 38 | GO:0005802: trans-Golgi network | 1.62E-02 |
| 39 | GO:0019005: SCF ubiquitin ligase complex | 1.65E-02 |
| 40 | GO:0005622: intracellular | 1.85E-02 |
| 41 | GO:0005819: spindle | 2.08E-02 |
| 42 | GO:0005743: mitochondrial inner membrane | 2.17E-02 |
| 43 | GO:0005840: ribosome | 2.31E-02 |
| 44 | GO:0000502: proteasome complex | 2.89E-02 |
| 45 | GO:0005635: nuclear envelope | 3.04E-02 |
| 46 | GO:0000139: Golgi membrane | 3.18E-02 |
| 47 | GO:0005747: mitochondrial respiratory chain complex I | 3.33E-02 |
| 48 | GO:0048046: apoplast | 3.65E-02 |
| 49 | GO:0005732: small nucleolar ribonucleoprotein complex | 3.96E-02 |
| 50 | GO:0010287: plastoglobule | 4.20E-02 |
| 51 | GO:0009524: phragmoplast | 4.53E-02 |