GO Enrichment Analysis of Co-expressed Genes with
AT3G14110
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 2 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 3 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 4 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 5 | GO:0006223: uracil salvage | 0.00E+00 |
| 6 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 7 | GO:0015805: S-adenosyl-L-methionine transport | 0.00E+00 |
| 8 | GO:0099131: ATP hydrolysis coupled ion transmembrane transport | 0.00E+00 |
| 9 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 10 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 11 | GO:0015979: photosynthesis | 1.95E-09 |
| 12 | GO:0032544: plastid translation | 9.72E-09 |
| 13 | GO:0006412: translation | 9.74E-08 |
| 14 | GO:0009658: chloroplast organization | 4.47E-06 |
| 15 | GO:0009735: response to cytokinin | 9.54E-06 |
| 16 | GO:0042549: photosystem II stabilization | 3.53E-05 |
| 17 | GO:0010196: nonphotochemical quenching | 6.70E-05 |
| 18 | GO:0071482: cellular response to light stimulus | 1.09E-04 |
| 19 | GO:0009657: plastid organization | 1.09E-04 |
| 20 | GO:0043489: RNA stabilization | 1.31E-04 |
| 21 | GO:1904966: positive regulation of vitamin E biosynthetic process | 1.31E-04 |
| 22 | GO:1904964: positive regulation of phytol biosynthetic process | 1.31E-04 |
| 23 | GO:0042371: vitamin K biosynthetic process | 1.31E-04 |
| 24 | GO:0009073: aromatic amino acid family biosynthetic process | 2.24E-04 |
| 25 | GO:0006352: DNA-templated transcription, initiation | 2.24E-04 |
| 26 | GO:0009767: photosynthetic electron transport chain | 2.95E-04 |
| 27 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 3.03E-04 |
| 28 | GO:0009662: etioplast organization | 3.03E-04 |
| 29 | GO:0042254: ribosome biogenesis | 4.92E-04 |
| 30 | GO:0000913: preprophase band assembly | 4.99E-04 |
| 31 | GO:0010581: regulation of starch biosynthetic process | 4.99E-04 |
| 32 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 4.99E-04 |
| 33 | GO:0030865: cortical cytoskeleton organization | 4.99E-04 |
| 34 | GO:0006241: CTP biosynthetic process | 7.14E-04 |
| 35 | GO:0006165: nucleoside diphosphate phosphorylation | 7.14E-04 |
| 36 | GO:0006228: UTP biosynthetic process | 7.14E-04 |
| 37 | GO:0006424: glutamyl-tRNA aminoacylation | 7.14E-04 |
| 38 | GO:0055070: copper ion homeostasis | 7.14E-04 |
| 39 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 7.14E-04 |
| 40 | GO:2001141: regulation of RNA biosynthetic process | 7.14E-04 |
| 41 | GO:0006183: GTP biosynthetic process | 9.47E-04 |
| 42 | GO:0044206: UMP salvage | 9.47E-04 |
| 43 | GO:0006546: glycine catabolic process | 9.47E-04 |
| 44 | GO:0071483: cellular response to blue light | 9.47E-04 |
| 45 | GO:0051781: positive regulation of cell division | 9.47E-04 |
| 46 | GO:0043097: pyrimidine nucleoside salvage | 1.20E-03 |
| 47 | GO:0032543: mitochondrial translation | 1.20E-03 |
| 48 | GO:0010236: plastoquinone biosynthetic process | 1.20E-03 |
| 49 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.20E-03 |
| 50 | GO:0031365: N-terminal protein amino acid modification | 1.20E-03 |
| 51 | GO:0035434: copper ion transmembrane transport | 1.20E-03 |
| 52 | GO:0006461: protein complex assembly | 1.20E-03 |
| 53 | GO:0009107: lipoate biosynthetic process | 1.20E-03 |
| 54 | GO:0008152: metabolic process | 1.37E-03 |
| 55 | GO:0000470: maturation of LSU-rRNA | 1.47E-03 |
| 56 | GO:0006206: pyrimidine nucleobase metabolic process | 1.47E-03 |
| 57 | GO:0010190: cytochrome b6f complex assembly | 1.47E-03 |
| 58 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.47E-03 |
| 59 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.76E-03 |
| 60 | GO:0030488: tRNA methylation | 1.76E-03 |
| 61 | GO:0010189: vitamin E biosynthetic process | 1.76E-03 |
| 62 | GO:0009854: oxidative photosynthetic carbon pathway | 1.76E-03 |
| 63 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 2.06E-03 |
| 64 | GO:0006400: tRNA modification | 2.06E-03 |
| 65 | GO:0045010: actin nucleation | 2.39E-03 |
| 66 | GO:0019430: removal of superoxide radicals | 2.73E-03 |
| 67 | GO:0030001: metal ion transport | 2.94E-03 |
| 68 | GO:0009051: pentose-phosphate shunt, oxidative branch | 3.08E-03 |
| 69 | GO:0006098: pentose-phosphate shunt | 3.08E-03 |
| 70 | GO:0010206: photosystem II repair | 3.08E-03 |
| 71 | GO:0010380: regulation of chlorophyll biosynthetic process | 3.46E-03 |
| 72 | GO:0006535: cysteine biosynthetic process from serine | 3.84E-03 |
| 73 | GO:0048829: root cap development | 3.84E-03 |
| 74 | GO:0043085: positive regulation of catalytic activity | 4.24E-03 |
| 75 | GO:0018119: peptidyl-cysteine S-nitrosylation | 4.24E-03 |
| 76 | GO:0006790: sulfur compound metabolic process | 4.65E-03 |
| 77 | GO:0006006: glucose metabolic process | 5.08E-03 |
| 78 | GO:0030036: actin cytoskeleton organization | 5.08E-03 |
| 79 | GO:0006094: gluconeogenesis | 5.08E-03 |
| 80 | GO:0006096: glycolytic process | 5.28E-03 |
| 81 | GO:0010143: cutin biosynthetic process | 5.52E-03 |
| 82 | GO:0010020: chloroplast fission | 5.52E-03 |
| 83 | GO:0010207: photosystem II assembly | 5.52E-03 |
| 84 | GO:0090351: seedling development | 5.97E-03 |
| 85 | GO:0046854: phosphatidylinositol phosphorylation | 5.97E-03 |
| 86 | GO:0019344: cysteine biosynthetic process | 6.91E-03 |
| 87 | GO:0009116: nucleoside metabolic process | 6.91E-03 |
| 88 | GO:0000027: ribosomal large subunit assembly | 6.91E-03 |
| 89 | GO:0006418: tRNA aminoacylation for protein translation | 7.40E-03 |
| 90 | GO:0003333: amino acid transmembrane transport | 7.91E-03 |
| 91 | GO:0009793: embryo development ending in seed dormancy | 8.92E-03 |
| 92 | GO:0009411: response to UV | 8.95E-03 |
| 93 | GO:0016117: carotenoid biosynthetic process | 1.00E-02 |
| 94 | GO:0000226: microtubule cytoskeleton organization | 1.06E-02 |
| 95 | GO:0042335: cuticle development | 1.06E-02 |
| 96 | GO:0048868: pollen tube development | 1.12E-02 |
| 97 | GO:0009451: RNA modification | 1.12E-02 |
| 98 | GO:0008654: phospholipid biosynthetic process | 1.24E-02 |
| 99 | GO:0032502: developmental process | 1.36E-02 |
| 100 | GO:0030163: protein catabolic process | 1.42E-02 |
| 101 | GO:0010090: trichome morphogenesis | 1.42E-02 |
| 102 | GO:0001666: response to hypoxia | 1.68E-02 |
| 103 | GO:0010027: thylakoid membrane organization | 1.68E-02 |
| 104 | GO:0042128: nitrate assimilation | 1.82E-02 |
| 105 | GO:0009817: defense response to fungus, incompatible interaction | 2.03E-02 |
| 106 | GO:0048481: plant ovule development | 2.03E-02 |
| 107 | GO:0018298: protein-chromophore linkage | 2.03E-02 |
| 108 | GO:0009407: toxin catabolic process | 2.18E-02 |
| 109 | GO:0009631: cold acclimation | 2.25E-02 |
| 110 | GO:0006865: amino acid transport | 2.33E-02 |
| 111 | GO:0009853: photorespiration | 2.41E-02 |
| 112 | GO:0045087: innate immune response | 2.41E-02 |
| 113 | GO:0009637: response to blue light | 2.41E-02 |
| 114 | GO:0045454: cell redox homeostasis | 2.53E-02 |
| 115 | GO:0006839: mitochondrial transport | 2.64E-02 |
| 116 | GO:0042542: response to hydrogen peroxide | 2.80E-02 |
| 117 | GO:0010114: response to red light | 2.88E-02 |
| 118 | GO:0009636: response to toxic substance | 3.13E-02 |
| 119 | GO:0009585: red, far-red light phototransduction | 3.56E-02 |
| 120 | GO:0048316: seed development | 4.11E-02 |
| 121 | GO:0009734: auxin-activated signaling pathway | 4.39E-02 |
| 122 | GO:0006396: RNA processing | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046608: carotenoid isomerase activity | 0.00E+00 |
| 2 | GO:0004561: alpha-N-acetylglucosaminidase activity | 0.00E+00 |
| 3 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 4 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 5 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 6 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 7 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 8 | GO:0005048: signal sequence binding | 0.00E+00 |
| 9 | GO:0019843: rRNA binding | 5.57E-15 |
| 10 | GO:0003735: structural constituent of ribosome | 3.30E-08 |
| 11 | GO:0016987: sigma factor activity | 1.44E-05 |
| 12 | GO:0001053: plastid sigma factor activity | 1.44E-05 |
| 13 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 1.31E-04 |
| 14 | GO:0009496: plastoquinol--plastocyanin reductase activity | 1.31E-04 |
| 15 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 1.31E-04 |
| 16 | GO:0005080: protein kinase C binding | 1.31E-04 |
| 17 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 1.31E-04 |
| 18 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 3.03E-04 |
| 19 | GO:0000774: adenyl-nucleotide exchange factor activity | 3.03E-04 |
| 20 | GO:0004802: transketolase activity | 3.03E-04 |
| 21 | GO:0050017: L-3-cyanoalanine synthase activity | 3.03E-04 |
| 22 | GO:0008266: poly(U) RNA binding | 3.34E-04 |
| 23 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.54E-04 |
| 24 | GO:0005528: FK506 binding | 4.64E-04 |
| 25 | GO:0016531: copper chaperone activity | 4.99E-04 |
| 26 | GO:0019829: cation-transporting ATPase activity | 4.99E-04 |
| 27 | GO:0016992: lipoate synthase activity | 4.99E-04 |
| 28 | GO:0002161: aminoacyl-tRNA editing activity | 4.99E-04 |
| 29 | GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | 4.99E-04 |
| 30 | GO:0030267: glyoxylate reductase (NADP) activity | 4.99E-04 |
| 31 | GO:0004550: nucleoside diphosphate kinase activity | 7.14E-04 |
| 32 | GO:0043023: ribosomal large subunit binding | 7.14E-04 |
| 33 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 9.47E-04 |
| 34 | GO:0010328: auxin influx transmembrane transporter activity | 9.47E-04 |
| 35 | GO:0043495: protein anchor | 9.47E-04 |
| 36 | GO:0004845: uracil phosphoribosyltransferase activity | 9.47E-04 |
| 37 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 9.47E-04 |
| 38 | GO:0003729: mRNA binding | 1.09E-03 |
| 39 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.20E-03 |
| 40 | GO:0003723: RNA binding | 1.31E-03 |
| 41 | GO:0004332: fructose-bisphosphate aldolase activity | 1.47E-03 |
| 42 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.47E-03 |
| 43 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.76E-03 |
| 44 | GO:0004849: uridine kinase activity | 1.76E-03 |
| 45 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.76E-03 |
| 46 | GO:0004124: cysteine synthase activity | 1.76E-03 |
| 47 | GO:0005509: calcium ion binding | 1.79E-03 |
| 48 | GO:0008236: serine-type peptidase activity | 1.95E-03 |
| 49 | GO:0008235: metalloexopeptidase activity | 2.06E-03 |
| 50 | GO:0019899: enzyme binding | 2.06E-03 |
| 51 | GO:0008312: 7S RNA binding | 2.39E-03 |
| 52 | GO:0004033: aldo-keto reductase (NADP) activity | 2.39E-03 |
| 53 | GO:0005375: copper ion transmembrane transporter activity | 2.73E-03 |
| 54 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.59E-03 |
| 55 | GO:0008047: enzyme activator activity | 3.84E-03 |
| 56 | GO:0004177: aminopeptidase activity | 4.24E-03 |
| 57 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.47E-03 |
| 58 | GO:0000049: tRNA binding | 4.65E-03 |
| 59 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 5.08E-03 |
| 60 | GO:0005525: GTP binding | 6.03E-03 |
| 61 | GO:0051536: iron-sulfur cluster binding | 6.91E-03 |
| 62 | GO:0051087: chaperone binding | 7.40E-03 |
| 63 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 7.91E-03 |
| 64 | GO:0022891: substrate-specific transmembrane transporter activity | 8.95E-03 |
| 65 | GO:0004812: aminoacyl-tRNA ligase activity | 1.00E-02 |
| 66 | GO:0016853: isomerase activity | 1.18E-02 |
| 67 | GO:0050662: coenzyme binding | 1.18E-02 |
| 68 | GO:0004791: thioredoxin-disulfide reductase activity | 1.18E-02 |
| 69 | GO:0046872: metal ion binding | 1.35E-02 |
| 70 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.42E-02 |
| 71 | GO:0016791: phosphatase activity | 1.49E-02 |
| 72 | GO:0016740: transferase activity | 1.67E-02 |
| 73 | GO:0016168: chlorophyll binding | 1.75E-02 |
| 74 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 1.96E-02 |
| 75 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.96E-02 |
| 76 | GO:0003746: translation elongation factor activity | 2.41E-02 |
| 77 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 2.48E-02 |
| 78 | GO:0050661: NADP binding | 2.64E-02 |
| 79 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.64E-02 |
| 80 | GO:0042803: protein homodimerization activity | 2.66E-02 |
| 81 | GO:0004364: glutathione transferase activity | 2.80E-02 |
| 82 | GO:0003924: GTPase activity | 3.12E-02 |
| 83 | GO:0005198: structural molecule activity | 3.13E-02 |
| 84 | GO:0015293: symporter activity | 3.13E-02 |
| 85 | GO:0015171: amino acid transmembrane transporter activity | 3.83E-02 |
| 86 | GO:0051082: unfolded protein binding | 4.58E-02 |
| 87 | GO:0016746: transferase activity, transferring acyl groups | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.93E-54 |
| 2 | GO:0009570: chloroplast stroma | 4.61E-41 |
| 3 | GO:0009941: chloroplast envelope | 7.71E-35 |
| 4 | GO:0009579: thylakoid | 8.49E-26 |
| 5 | GO:0009543: chloroplast thylakoid lumen | 1.66E-18 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 2.26E-18 |
| 7 | GO:0031977: thylakoid lumen | 1.66E-15 |
| 8 | GO:0005840: ribosome | 9.43E-10 |
| 9 | GO:0009654: photosystem II oxygen evolving complex | 4.34E-09 |
| 10 | GO:0019898: extrinsic component of membrane | 3.69E-08 |
| 11 | GO:0009534: chloroplast thylakoid | 2.22E-06 |
| 12 | GO:0030095: chloroplast photosystem II | 1.02E-05 |
| 13 | GO:0009536: plastid | 2.79E-05 |
| 14 | GO:0009533: chloroplast stromal thylakoid | 6.70E-05 |
| 15 | GO:0009523: photosystem II | 6.86E-05 |
| 16 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 1.31E-04 |
| 17 | GO:0009547: plastid ribosome | 1.31E-04 |
| 18 | GO:0030981: cortical microtubule cytoskeleton | 3.03E-04 |
| 19 | GO:0080085: signal recognition particle, chloroplast targeting | 3.03E-04 |
| 20 | GO:0000312: plastid small ribosomal subunit | 3.34E-04 |
| 21 | GO:0042651: thylakoid membrane | 5.12E-04 |
| 22 | GO:0009706: chloroplast inner membrane | 8.48E-04 |
| 23 | GO:0009512: cytochrome b6f complex | 1.20E-03 |
| 24 | GO:0031209: SCAR complex | 1.47E-03 |
| 25 | GO:0005759: mitochondrial matrix | 1.48E-03 |
| 26 | GO:0015934: large ribosomal subunit | 2.37E-03 |
| 27 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 2.73E-03 |
| 28 | GO:0045298: tubulin complex | 3.08E-03 |
| 29 | GO:0031969: chloroplast membrane | 3.81E-03 |
| 30 | GO:0022625: cytosolic large ribosomal subunit | 4.06E-03 |
| 31 | GO:0000311: plastid large ribosomal subunit | 4.65E-03 |
| 32 | GO:0030659: cytoplasmic vesicle membrane | 5.52E-03 |
| 33 | GO:0015935: small ribosomal subunit | 7.91E-03 |
| 34 | GO:0022626: cytosolic ribosome | 1.22E-02 |
| 35 | GO:0022627: cytosolic small ribosomal subunit | 1.46E-02 |
| 36 | GO:0030529: intracellular ribonucleoprotein complex | 1.68E-02 |
| 37 | GO:0016020: membrane | 1.87E-02 |