co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G13690

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090627: plant epidermal cell differentiation	0.00E+00
2	GO:0045014: negative regulation of transcription by glucose	0.00E+00
3	GO:0051513: regulation of monopolar cell growth	8.75E-07
4	GO:0010206: photosystem II repair	1.99E-05
5	GO:0000476: maturation of 4.5S rRNA	3.77E-05
6	GO:0000967: rRNA 5'-end processing	3.77E-05
7	GO:0010480: microsporocyte differentiation	3.77E-05
8	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	3.77E-05
9	GO:0034470: ncRNA processing	9.40E-05
10	GO:0045493: xylan catabolic process	1.63E-04
11	GO:0042335: cuticle development	1.63E-04
12	GO:0010306: rhamnogalacturonan II biosynthetic process	2.40E-04
13	GO:0080170: hydrogen peroxide transmembrane transport	2.40E-04
14	GO:0030104: water homeostasis	3.24E-04
15	GO:0015995: chlorophyll biosynthetic process	3.80E-04
16	GO:0009913: epidermal cell differentiation	5.07E-04
17	GO:0009942: longitudinal axis specification	6.05E-04
18	GO:0009926: auxin polar transport	6.76E-04
19	GO:0048437: floral organ development	7.07E-04
20	GO:0050829: defense response to Gram-negative bacterium	7.07E-04
21	GO:0046620: regulation of organ growth	8.13E-04
22	GO:0009664: plant-type cell wall organization	8.40E-04
23	GO:0007389: pattern specification process	9.23E-04
24	GO:0048589: developmental growth	1.04E-03
25	GO:0009245: lipid A biosynthetic process	1.04E-03
26	GO:0009734: auxin-activated signaling pathway	1.18E-03
27	GO:1903507: negative regulation of nucleic acid-templated transcription	1.40E-03
28	GO:0048229: gametophyte development	1.40E-03
29	GO:0010152: pollen maturation	1.53E-03
30	GO:0010075: regulation of meristem growth	1.67E-03
31	GO:0010207: photosystem II assembly	1.81E-03
32	GO:0009934: regulation of meristem structural organization	1.81E-03
33	GO:0010030: positive regulation of seed germination	1.95E-03
34	GO:0007623: circadian rhythm	2.13E-03
35	GO:0045490: pectin catabolic process	2.13E-03
36	GO:0007017: microtubule-based process	2.40E-03
37	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.72E-03
38	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	2.89E-03
39	GO:0048443: stamen development	3.05E-03
40	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	3.22E-03
41	GO:0034220: ion transmembrane transport	3.40E-03
42	GO:0048653: anther development	3.40E-03
43	GO:0042631: cellular response to water deprivation	3.40E-03
44	GO:0048868: pollen tube development	3.58E-03
45	GO:0048825: cotyledon development	3.94E-03
46	GO:0000302: response to reactive oxygen species	4.13E-03
47	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.19E-03
48	GO:0010583: response to cyclopentenone	4.32E-03
49	GO:1901657: glycosyl compound metabolic process	4.51E-03
50	GO:0030163: protein catabolic process	4.51E-03
51	GO:0009828: plant-type cell wall loosening	4.70E-03
52	GO:0010252: auxin homeostasis	4.70E-03
53	GO:0009627: systemic acquired resistance	5.73E-03
54	GO:0010411: xyloglucan metabolic process	5.94E-03
55	GO:0034599: cellular response to oxidative stress	7.75E-03
56	GO:0006855: drug transmembrane transport	9.99E-03
57	GO:0031347: regulation of defense response	1.02E-02
58	GO:0042545: cell wall modification	1.39E-02
59	GO:0009624: response to nematode	1.42E-02
60	GO:0006468: protein phosphorylation	1.45E-02
61	GO:0009845: seed germination	1.76E-02
62	GO:0042744: hydrogen peroxide catabolic process	1.82E-02
63	GO:0006633: fatty acid biosynthetic process	1.95E-02
64	GO:0009733: response to auxin	2.41E-02
65	GO:0009826: unidimensional cell growth	2.78E-02
66	GO:0009658: chloroplast organization	2.85E-02
67	GO:0009860: pollen tube growth	3.01E-02
68	GO:0015979: photosynthesis	3.65E-02
69	GO:0007275: multicellular organism development	4.21E-02
70	GO:0032259: methylation	4.25E-02
71	GO:0016042: lipid catabolic process	4.30E-02
72	GO:0048364: root development	4.52E-02

Rank	GO Term	Adjusted P value
1	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
2	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
3	GO:0046406: magnesium protoporphyrin IX methyltransferase activity	0.00E+00
4	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	3.77E-05
5	GO:0016851: magnesium chelatase activity	2.40E-04
6	GO:0009044: xylan 1,4-beta-xylosidase activity	3.24E-04
7	GO:0046556: alpha-L-arabinofuranosidase activity	3.24E-04
8	GO:0010011: auxin binding	3.24E-04
9	GO:0031177: phosphopantetheine binding	5.07E-04
10	GO:0004130: cytochrome-c peroxidase activity	5.07E-04
11	GO:0004712: protein serine/threonine/tyrosine kinase activity	5.76E-04
12	GO:0000035: acyl binding	6.05E-04
13	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	8.13E-04
14	GO:0009672: auxin:proton symporter activity	1.15E-03
15	GO:0031072: heat shock protein binding	1.67E-03
16	GO:0010329: auxin efflux transmembrane transporter activity	1.67E-03
17	GO:0005528: FK506 binding	2.25E-03
18	GO:0003714: transcription corepressor activity	2.25E-03
19	GO:0033612: receptor serine/threonine kinase binding	2.56E-03
20	GO:0030570: pectate lyase activity	2.89E-03
21	GO:0003756: protein disulfide isomerase activity	3.05E-03
22	GO:0005200: structural constituent of cytoskeleton	4.90E-03
23	GO:0015250: water channel activity	5.31E-03
24	GO:0102483: scopolin beta-glucosidase activity	5.94E-03
25	GO:0008236: serine-type peptidase activity	6.16E-03
26	GO:0005096: GTPase activator activity	6.60E-03
27	GO:0003746: translation elongation factor activity	7.51E-03
28	GO:0008422: beta-glucosidase activity	7.99E-03
29	GO:0008289: lipid binding	8.28E-03
30	GO:0005198: structural molecule activity	9.73E-03
31	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	9.99E-03
32	GO:0045330: aspartyl esterase activity	1.19E-02
33	GO:0030599: pectinesterase activity	1.36E-02
34	GO:0005515: protein binding	1.38E-02
35	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.40E-02
36	GO:0051082: unfolded protein binding	1.42E-02
37	GO:0005525: GTP binding	1.74E-02
38	GO:0016829: lyase activity	1.76E-02
39	GO:0004252: serine-type endopeptidase activity	1.79E-02
40	GO:0046910: pectinesterase inhibitor activity	1.99E-02
41	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.48E-02
42	GO:0004601: peroxidase activity	2.85E-02
43	GO:0016788: hydrolase activity, acting on ester bonds	2.89E-02
44	GO:0004674: protein serine/threonine kinase activity	2.89E-02
45	GO:0004672: protein kinase activity	3.16E-02
46	GO:0052689: carboxylic ester hydrolase activity	3.57E-02
47	GO:0005524: ATP binding	4.09E-02
48	GO:0003924: GTPase activity	4.39E-02
49	GO:0016301: kinase activity	4.54E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0009534: chloroplast thylakoid	8.68E-11
3	GO:0009543: chloroplast thylakoid lumen	5.34E-06
4	GO:0009535: chloroplast thylakoid membrane	6.92E-06
5	GO:0009570: chloroplast stroma	2.44E-05
6	GO:0031977: thylakoid lumen	3.03E-05
7	GO:0043674: columella	3.77E-05
8	GO:0009507: chloroplast	4.55E-05
9	GO:0010007: magnesium chelatase complex	1.63E-04
10	GO:0009531: secondary cell wall	2.40E-04
11	GO:0042807: central vacuole	7.07E-04
12	GO:0009533: chloroplast stromal thylakoid	7.07E-04
13	GO:0045298: tubulin complex	1.04E-03
14	GO:0009941: chloroplast envelope	1.62E-03
15	GO:0009579: thylakoid	1.98E-03
16	GO:0071944: cell periphery	4.51E-03
17	GO:0005618: cell wall	5.28E-03
18	GO:0010287: plastoglobule	1.60E-02
19	GO:0016020: membrane	1.63E-02
20	GO:0009705: plant-type vacuole membrane	2.09E-02
21	GO:0009505: plant-type cell wall	2.69E-02
22	GO:0005886: plasma membrane	2.96E-02
23	GO:0005874: microtubule	3.24E-02
24	GO:0031969: chloroplast membrane	3.32E-02