co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G13520

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010394: homogalacturonan metabolic process	0.00E+00
2	GO:0080094: response to trehalose-6-phosphate	0.00E+00
3	GO:0007638: mechanosensory behavior	0.00E+00
4	GO:0010411: xyloglucan metabolic process	1.50E-07
5	GO:0006633: fatty acid biosynthetic process	6.52E-07
6	GO:0042546: cell wall biogenesis	8.52E-07
7	GO:0010583: response to cyclopentenone	2.20E-06
8	GO:0071555: cell wall organization	9.64E-06
9	GO:0015976: carbon utilization	1.25E-05
10	GO:0006169: adenosine salvage	1.22E-04
11	GO:0010442: guard cell morphogenesis	1.22E-04
12	GO:0071370: cellular response to gibberellin stimulus	1.22E-04
13	GO:0042547: cell wall modification involved in multidimensional cell growth	1.22E-04
14	GO:0045488: pectin metabolic process	1.22E-04
15	GO:0000038: very long-chain fatty acid metabolic process	2.00E-04
16	GO:0030036: actin cytoskeleton organization	2.65E-04
17	GO:0071258: cellular response to gravity	2.82E-04
18	GO:2000123: positive regulation of stomatal complex development	2.82E-04
19	GO:0052541: plant-type cell wall cellulose metabolic process	2.82E-04
20	GO:0060919: auxin influx	2.82E-04
21	GO:0006833: water transport	3.77E-04
22	GO:0009826: unidimensional cell growth	3.81E-04
23	GO:2001295: malonyl-CoA biosynthetic process	4.65E-04
24	GO:0006065: UDP-glucuronate biosynthetic process	4.65E-04
25	GO:0046739: transport of virus in multicellular host	6.66E-04
26	GO:0007231: osmosensory signaling pathway	6.66E-04
27	GO:0051016: barbed-end actin filament capping	6.66E-04
28	GO:0034220: ion transmembrane transport	7.61E-04
29	GO:0042335: cuticle development	7.61E-04
30	GO:0045489: pectin biosynthetic process	8.17E-04
31	GO:0033500: carbohydrate homeostasis	8.84E-04
32	GO:2000038: regulation of stomatal complex development	8.84E-04
33	GO:0010037: response to carbon dioxide	8.84E-04
34	GO:0006085: acetyl-CoA biosynthetic process	8.84E-04
35	GO:0006183: GTP biosynthetic process	8.84E-04
36	GO:2000122: negative regulation of stomatal complex development	8.84E-04
37	GO:0044209: AMP salvage	1.12E-03
38	GO:0010375: stomatal complex patterning	1.12E-03
39	GO:0007267: cell-cell signaling	1.27E-03
40	GO:0009635: response to herbicide	1.37E-03
41	GO:0045490: pectin catabolic process	1.46E-03
42	GO:0042372: phylloquinone biosynthetic process	1.64E-03
43	GO:0009612: response to mechanical stimulus	1.64E-03
44	GO:0006694: steroid biosynthetic process	1.64E-03
45	GO:0009645: response to low light intensity stimulus	1.92E-03
46	GO:0030497: fatty acid elongation	1.92E-03
47	GO:0045010: actin nucleation	2.22E-03
48	GO:0007155: cell adhesion	2.22E-03
49	GO:0009416: response to light stimulus	2.40E-03
50	GO:0009808: lignin metabolic process	2.54E-03
51	GO:0009932: cell tip growth	2.54E-03
52	GO:0010497: plasmodesmata-mediated intercellular transport	2.54E-03
53	GO:0006754: ATP biosynthetic process	2.87E-03
54	GO:0055085: transmembrane transport	3.45E-03
55	GO:0009870: defense response signaling pathway, resistance gene-dependent	3.57E-03
56	GO:0043069: negative regulation of programmed cell death	3.57E-03
57	GO:0048829: root cap development	3.57E-03
58	GO:0009641: shade avoidance	3.57E-03
59	GO:0009089: lysine biosynthetic process via diaminopimelate	3.94E-03
60	GO:0006816: calcium ion transport	3.94E-03
61	GO:0019684: photosynthesis, light reaction	3.94E-03
62	GO:0006857: oligopeptide transport	4.30E-03
63	GO:0015706: nitrate transport	4.32E-03
64	GO:0009725: response to hormone	4.71E-03
65	GO:0070588: calcium ion transmembrane transport	5.54E-03
66	GO:0010167: response to nitrate	5.54E-03
67	GO:0005985: sucrose metabolic process	5.54E-03
68	GO:0010025: wax biosynthetic process	5.98E-03
69	GO:0006071: glycerol metabolic process	5.98E-03
70	GO:0005992: trehalose biosynthetic process	6.42E-03
71	GO:0010026: trichome differentiation	6.87E-03
72	GO:0043622: cortical microtubule organization	6.87E-03
73	GO:0007017: microtubule-based process	6.87E-03
74	GO:0003333: amino acid transmembrane transport	7.34E-03
75	GO:0030245: cellulose catabolic process	7.81E-03
76	GO:0009814: defense response, incompatible interaction	7.81E-03
77	GO:0040007: growth	8.30E-03
78	GO:0009733: response to auxin	8.35E-03
79	GO:0009734: auxin-activated signaling pathway	8.41E-03
80	GO:0006284: base-excision repair	8.80E-03
81	GO:0019722: calcium-mediated signaling	8.80E-03
82	GO:0040008: regulation of growth	9.41E-03
83	GO:0000271: polysaccharide biosynthetic process	9.83E-03
84	GO:0080022: primary root development	9.83E-03
85	GO:0009741: response to brassinosteroid	1.04E-02
86	GO:0016132: brassinosteroid biosynthetic process	1.20E-02
87	GO:0071554: cell wall organization or biogenesis	1.20E-02
88	GO:0016032: viral process	1.26E-02
89	GO:0032502: developmental process	1.26E-02
90	GO:1901657: glycosyl compound metabolic process	1.32E-02
91	GO:0016126: sterol biosynthetic process	1.56E-02
92	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.62E-02
93	GO:0009627: systemic acquired resistance	1.69E-02
94	GO:0042128: nitrate assimilation	1.69E-02
95	GO:0030244: cellulose biosynthetic process	1.88E-02
96	GO:0000160: phosphorelay signal transduction system	1.95E-02
97	GO:0010311: lateral root formation	1.95E-02
98	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.97E-02
99	GO:0009834: plant-type secondary cell wall biogenesis	2.02E-02
100	GO:0010119: regulation of stomatal movement	2.09E-02
101	GO:0007568: aging	2.09E-02
102	GO:0006865: amino acid transport	2.16E-02
103	GO:0016051: carbohydrate biosynthetic process	2.23E-02
104	GO:0006631: fatty acid metabolic process	2.52E-02
105	GO:0009926: auxin polar transport	2.67E-02
106	GO:0009744: response to sucrose	2.67E-02
107	GO:0009414: response to water deprivation	2.67E-02
108	GO:0006629: lipid metabolic process	2.81E-02
109	GO:0008643: carbohydrate transport	2.82E-02
110	GO:0042538: hyperosmotic salinity response	3.14E-02
111	GO:0009736: cytokinin-activated signaling pathway	3.30E-02
112	GO:0048367: shoot system development	3.80E-02
113	GO:0009409: response to cold	4.00E-02
114	GO:0009742: brassinosteroid mediated signaling pathway	4.42E-02
115	GO:0005975: carbohydrate metabolic process	4.59E-02

Rank	GO Term	Adjusted P value
1	GO:0050613: delta14-sterol reductase activity	0.00E+00
2	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
3	GO:0019146: arabinose-5-phosphate isomerase activity	0.00E+00
4	GO:0050614: delta24-sterol reductase activity	0.00E+00
5	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.34E-08
6	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.50E-07
7	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.05E-06
8	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.25E-05
9	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.25E-05
10	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.25E-05
11	GO:0009922: fatty acid elongase activity	2.06E-05
12	GO:0030570: pectate lyase activity	2.79E-05
13	GO:0005200: structural constituent of cytoskeleton	9.50E-05
14	GO:0080132: fatty acid alpha-hydroxylase activity	1.22E-04
15	GO:0004001: adenosine kinase activity	1.22E-04
16	GO:0004089: carbonate dehydratase activity	2.65E-04
17	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	2.82E-04
18	GO:0003938: IMP dehydrogenase activity	2.82E-04
19	GO:0016297: acyl-[acyl-carrier-protein] hydrolase activity	2.82E-04
20	GO:0004075: biotin carboxylase activity	4.65E-04
21	GO:0003979: UDP-glucose 6-dehydrogenase activity	4.65E-04
22	GO:0003878: ATP citrate synthase activity	6.66E-04
23	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	6.66E-04
24	GO:0010328: auxin influx transmembrane transporter activity	8.84E-04
25	GO:0003989: acetyl-CoA carboxylase activity	1.12E-03
26	GO:0008725: DNA-3-methyladenine glycosylase activity	1.12E-03
27	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.27E-03
28	GO:0016208: AMP binding	1.37E-03
29	GO:0015250: water channel activity	1.42E-03
30	GO:0005215: transporter activity	2.03E-03
31	GO:0004564: beta-fructofuranosidase activity	2.22E-03
32	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	2.22E-03
33	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	2.87E-03
34	GO:0008889: glycerophosphodiester phosphodiesterase activity	2.87E-03
35	GO:0015112: nitrate transmembrane transporter activity	3.21E-03
36	GO:0004575: sucrose alpha-glucosidase activity	3.21E-03
37	GO:0015293: symporter activity	3.36E-03
38	GO:0004805: trehalose-phosphatase activity	3.57E-03
39	GO:0005507: copper ion binding	4.11E-03
40	GO:0005262: calcium channel activity	4.71E-03
41	GO:0004650: polygalacturonase activity	5.21E-03
42	GO:0003712: transcription cofactor activity	5.54E-03
43	GO:0016829: lyase activity	7.72E-03
44	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	7.81E-03
45	GO:0008810: cellulase activity	8.30E-03
46	GO:0008514: organic anion transmembrane transporter activity	8.80E-03
47	GO:0019901: protein kinase binding	1.15E-02
48	GO:0004872: receptor activity	1.15E-02
49	GO:0000156: phosphorelay response regulator activity	1.32E-02
50	GO:0051015: actin filament binding	1.32E-02
51	GO:0016759: cellulose synthase activity	1.38E-02
52	GO:0016413: O-acetyltransferase activity	1.50E-02
53	GO:0102483: scopolin beta-glucosidase activity	1.75E-02
54	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.09E-02
55	GO:0008422: beta-glucosidase activity	2.37E-02
56	GO:0051287: NAD binding	3.06E-02
57	GO:0015171: amino acid transmembrane transporter activity	3.55E-02
58	GO:0022857: transmembrane transporter activity	4.06E-02
59	GO:0003779: actin binding	4.15E-02
60	GO:0016887: ATPase activity	4.33E-02
61	GO:0016746: transferase activity, transferring acyl groups	4.33E-02
62	GO:0016758: transferase activity, transferring hexosyl groups	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0048046: apoplast	2.76E-13
2	GO:0031225: anchored component of membrane	8.65E-11
3	GO:0046658: anchored component of plasma membrane	1.20E-10
4	GO:0005618: cell wall	9.05E-10
5	GO:0005886: plasma membrane	3.89E-08
6	GO:0005576: extracellular region	2.06E-06
7	GO:0009505: plant-type cell wall	2.42E-06
8	GO:0009506: plasmodesma	1.02E-05
9	GO:0045298: tubulin complex	1.20E-04
10	GO:0016021: integral component of membrane	4.35E-04
11	GO:0016020: membrane	5.57E-04
12	GO:0005775: vacuolar lumen	6.66E-04
13	GO:0009346: citrate lyase complex	6.66E-04
14	GO:0000139: Golgi membrane	7.33E-04
15	GO:0005773: vacuole	1.15E-03
16	GO:0005794: Golgi apparatus	3.27E-03
17	GO:0005789: endoplasmic reticulum membrane	3.58E-03
18	GO:0005802: trans-Golgi network	4.91E-03
19	GO:0030176: integral component of endoplasmic reticulum membrane	5.54E-03
20	GO:0005768: endosome	5.98E-03
21	GO:0005769: early endosome	5.98E-03
22	GO:0005887: integral component of plasma membrane	8.02E-03
23	GO:0009504: cell plate	1.15E-02
24	GO:0005778: peroxisomal membrane	1.44E-02
25	GO:0005774: vacuolar membrane	1.48E-02
26	GO:0000325: plant-type vacuole	2.09E-02
27	GO:0009941: chloroplast envelope	2.49E-02
28	GO:0031902: late endosome membrane	2.52E-02
29	GO:0005856: cytoskeleton	2.90E-02
30	GO:0005783: endoplasmic reticulum	4.78E-02