Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G13100

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0046109: uridine biosynthetic process0.00E+00
2GO:0080052: response to histidine0.00E+00
3GO:0080053: response to phenylalanine0.00E+00
4GO:0046865: terpenoid transport0.00E+00
5GO:1901183: positive regulation of camalexin biosynthetic process0.00E+00
6GO:0006182: cGMP biosynthetic process0.00E+00
7GO:0072722: response to amitrole0.00E+00
8GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
9GO:0071327: cellular response to trehalose stimulus0.00E+00
10GO:0010055: atrichoblast differentiation0.00E+00
11GO:0043201: response to leucine0.00E+00
12GO:1900367: positive regulation of defense response to insect0.00E+00
13GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
14GO:0009617: response to bacterium7.47E-12
15GO:0042742: defense response to bacterium2.02E-11
16GO:0006468: protein phosphorylation8.60E-08
17GO:0010120: camalexin biosynthetic process2.09E-07
18GO:0009627: systemic acquired resistance2.32E-07
19GO:0071456: cellular response to hypoxia2.94E-07
20GO:0010112: regulation of systemic acquired resistance3.34E-07
21GO:0080142: regulation of salicylic acid biosynthetic process5.80E-07
22GO:0009697: salicylic acid biosynthetic process1.31E-06
23GO:0080151: positive regulation of salicylic acid mediated signaling pathway5.13E-06
24GO:0010150: leaf senescence5.39E-06
25GO:0009620: response to fungus9.62E-06
26GO:0009751: response to salicylic acid1.77E-05
27GO:1900426: positive regulation of defense response to bacterium2.79E-05
28GO:0051707: response to other organism2.98E-05
29GO:0006952: defense response6.36E-05
30GO:0009626: plant-type hypersensitive response9.78E-05
31GO:0031348: negative regulation of defense response2.12E-04
32GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response2.20E-04
33GO:0010230: alternative respiration3.37E-04
34GO:0046244: salicylic acid catabolic process3.37E-04
35GO:0019276: UDP-N-acetylgalactosamine metabolic process3.37E-04
36GO:0032107: regulation of response to nutrient levels3.37E-04
37GO:0034975: protein folding in endoplasmic reticulum3.37E-04
38GO:0006047: UDP-N-acetylglucosamine metabolic process3.37E-04
39GO:0042350: GDP-L-fucose biosynthetic process3.37E-04
40GO:0099132: ATP hydrolysis coupled cation transmembrane transport3.37E-04
41GO:0010421: hydrogen peroxide-mediated programmed cell death3.37E-04
42GO:0009700: indole phytoalexin biosynthetic process3.37E-04
43GO:0030091: protein repair3.60E-04
44GO:0048544: recognition of pollen4.05E-04
45GO:0009699: phenylpropanoid biosynthetic process4.41E-04
46GO:0002229: defense response to oomycetes4.85E-04
47GO:0050832: defense response to fungus5.18E-04
48GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway6.25E-04
49GO:0055114: oxidation-reduction process7.03E-04
50GO:0006032: chitin catabolic process7.29E-04
51GO:0044419: interspecies interaction between organisms7.34E-04
52GO:0031349: positive regulation of defense response7.34E-04
53GO:0030003: cellular cation homeostasis7.34E-04
54GO:0042939: tripeptide transport7.34E-04
55GO:0080183: response to photooxidative stress7.34E-04
56GO:0010618: aerenchyma formation7.34E-04
57GO:0009805: coumarin biosynthetic process7.34E-04
58GO:0009615: response to virus7.75E-04
59GO:0009816: defense response to bacterium, incompatible interaction8.32E-04
60GO:0009682: induced systemic resistance8.40E-04
61GO:0002213: defense response to insect9.59E-04
62GO:0080168: abscisic acid transport1.19E-03
63GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.19E-03
64GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.19E-03
65GO:0002230: positive regulation of defense response to virus by host1.19E-03
66GO:0034051: negative regulation of plant-type hypersensitive response1.19E-03
67GO:0042351: 'de novo' GDP-L-fucose biosynthetic process1.19E-03
68GO:0006011: UDP-glucose metabolic process1.19E-03
69GO:0010272: response to silver ion1.19E-03
70GO:0015692: lead ion transport1.19E-03
71GO:0002237: response to molecule of bacterial origin1.22E-03
72GO:0070588: calcium ion transmembrane transport1.36E-03
73GO:0009737: response to abscisic acid1.59E-03
74GO:0009052: pentose-phosphate shunt, non-oxidative branch1.71E-03
75GO:0009226: nucleotide-sugar biosynthetic process1.71E-03
76GO:1902290: positive regulation of defense response to oomycetes1.71E-03
77GO:0046836: glycolipid transport1.71E-03
78GO:0019438: aromatic compound biosynthetic process1.71E-03
79GO:0033169: histone H3-K9 demethylation1.71E-03
80GO:0070301: cellular response to hydrogen peroxide1.71E-03
81GO:0002239: response to oomycetes1.71E-03
82GO:0006874: cellular calcium ion homeostasis1.86E-03
83GO:0016998: cell wall macromolecule catabolic process2.04E-03
84GO:0019748: secondary metabolic process2.23E-03
85GO:0071219: cellular response to molecule of bacterial origin2.30E-03
86GO:0042938: dipeptide transport2.30E-03
87GO:0045088: regulation of innate immune response2.30E-03
88GO:1901002: positive regulation of response to salt stress2.30E-03
89GO:0009636: response to toxic substance2.33E-03
90GO:0009625: response to insect2.43E-03
91GO:0006855: drug transmembrane transport2.44E-03
92GO:0042538: hyperosmotic salinity response2.68E-03
93GO:0030041: actin filament polymerization2.93E-03
94GO:0010225: response to UV-C2.93E-03
95GO:0034052: positive regulation of plant-type hypersensitive response2.93E-03
96GO:0000304: response to singlet oxygen2.93E-03
97GO:0006561: proline biosynthetic process3.63E-03
98GO:0010942: positive regulation of cell death3.63E-03
99GO:0006555: methionine metabolic process3.63E-03
100GO:0010193: response to ozone4.12E-03
101GO:0000302: response to reactive oxygen species4.12E-03
102GO:0042372: phylloquinone biosynthetic process4.37E-03
103GO:0010555: response to mannitol4.37E-03
104GO:0010310: regulation of hydrogen peroxide metabolic process4.37E-03
105GO:2000067: regulation of root morphogenesis4.37E-03
106GO:0019509: L-methionine salvage from methylthioadenosine4.37E-03
107GO:0010252: auxin homeostasis4.99E-03
108GO:0050829: defense response to Gram-negative bacterium5.15E-03
109GO:1900057: positive regulation of leaf senescence5.15E-03
110GO:0000122: negative regulation of transcription from RNA polymerase II promoter5.15E-03
111GO:1900056: negative regulation of leaf senescence5.15E-03
112GO:0019745: pentacyclic triterpenoid biosynthetic process5.15E-03
113GO:0051607: defense response to virus5.63E-03
114GO:0009850: auxin metabolic process5.99E-03
115GO:0031540: regulation of anthocyanin biosynthetic process5.99E-03
116GO:0009787: regulation of abscisic acid-activated signaling pathway5.99E-03
117GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline5.99E-03
118GO:0010497: plasmodesmata-mediated intercellular transport6.87E-03
119GO:0010204: defense response signaling pathway, resistance gene-independent6.87E-03
120GO:2000031: regulation of salicylic acid mediated signaling pathway6.87E-03
121GO:0007186: G-protein coupled receptor signaling pathway6.87E-03
122GO:0006979: response to oxidative stress7.40E-03
123GO:0009817: defense response to fungus, incompatible interaction7.79E-03
124GO:0009821: alkaloid biosynthetic process7.79E-03
125GO:0009407: toxin catabolic process8.59E-03
126GO:0006499: N-terminal protein myristoylation8.59E-03
127GO:2000280: regulation of root development8.75E-03
128GO:0007568: aging9.01E-03
129GO:0048527: lateral root development9.01E-03
130GO:0009870: defense response signaling pathway, resistance gene-dependent9.76E-03
131GO:0043069: negative regulation of programmed cell death9.76E-03
132GO:0045087: innate immune response9.89E-03
133GO:0009089: lysine biosynthetic process via diaminopimelate1.08E-02
134GO:0009073: aromatic amino acid family biosynthetic process1.08E-02
135GO:0000272: polysaccharide catabolic process1.08E-02
136GO:0009750: response to fructose1.08E-02
137GO:0006816: calcium ion transport1.08E-02
138GO:0007166: cell surface receptor signaling pathway1.10E-02
139GO:0007165: signal transduction1.14E-02
140GO:0006631: fatty acid metabolic process1.18E-02
141GO:0010105: negative regulation of ethylene-activated signaling pathway1.19E-02
142GO:0006790: sulfur compound metabolic process1.19E-02
143GO:0042542: response to hydrogen peroxide1.23E-02
144GO:0006807: nitrogen compound metabolic process1.30E-02
145GO:0009718: anthocyanin-containing compound biosynthetic process1.30E-02
146GO:0010143: cutin biosynthetic process1.42E-02
147GO:0046854: phosphatidylinositol phosphorylation1.54E-02
148GO:0010025: wax biosynthetic process1.66E-02
149GO:0000162: tryptophan biosynthetic process1.66E-02
150GO:0080147: root hair cell development1.79E-02
151GO:0010224: response to UV-B1.79E-02
152GO:0005992: trehalose biosynthetic process1.79E-02
153GO:0009863: salicylic acid mediated signaling pathway1.79E-02
154GO:0003333: amino acid transmembrane transport2.05E-02
155GO:0080167: response to karrikin2.11E-02
156GO:2000022: regulation of jasmonic acid mediated signaling pathway2.19E-02
157GO:0030433: ubiquitin-dependent ERAD pathway2.19E-02
158GO:0010200: response to chitin2.21E-02
159GO:0042545: cell wall modification2.39E-02
160GO:0009306: protein secretion2.47E-02
161GO:0042391: regulation of membrane potential2.77E-02
162GO:0010118: stomatal movement2.77E-02
163GO:0006885: regulation of pH2.92E-02
164GO:0009741: response to brassinosteroid2.92E-02
165GO:0009749: response to glucose3.23E-02
166GO:0006623: protein targeting to vacuole3.23E-02
167GO:0015031: protein transport3.25E-02
168GO:0009058: biosynthetic process3.25E-02
169GO:0032259: methylation3.26E-02
170GO:0016042: lipid catabolic process3.32E-02
171GO:0006629: lipid metabolic process3.44E-02
172GO:0009409: response to cold3.61E-02
173GO:0009753: response to jasmonic acid3.75E-02
174GO:0006633: fatty acid biosynthetic process3.86E-02
175GO:0006464: cellular protein modification process3.88E-02
176GO:0045490: pectin catabolic process4.24E-02
177GO:0001666: response to hypoxia4.40E-02
RankGO TermAdjusted P value
1GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
2GO:0016312: inositol bisphosphate phosphatase activity0.00E+00
3GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
4GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
5GO:0016301: kinase activity1.15E-11
6GO:0004674: protein serine/threonine kinase activity1.96E-09
7GO:0005524: ATP binding1.78E-07
8GO:0010279: indole-3-acetic acid amido synthetase activity7.15E-05
9GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.67E-04
10GO:0102391: decanoate--CoA ligase activity2.20E-04
11GO:0033743: peptide-methionine (R)-S-oxide reductase activity2.20E-04
12GO:0004467: long-chain fatty acid-CoA ligase activity2.86E-04
13GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity3.37E-04
14GO:0008909: isochorismate synthase activity3.37E-04
15GO:0031957: very long-chain fatty acid-CoA ligase activity3.37E-04
16GO:0010285: L,L-diaminopimelate aminotransferase activity3.37E-04
17GO:0050577: GDP-L-fucose synthase activity3.37E-04
18GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity3.37E-04
19GO:0004425: indole-3-glycerol-phosphate synthase activity3.37E-04
20GO:0004568: chitinase activity7.29E-04
21GO:0004775: succinate-CoA ligase (ADP-forming) activity7.34E-04
22GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity7.34E-04
23GO:0050736: O-malonyltransferase activity7.34E-04
24GO:0042937: tripeptide transporter activity7.34E-04
25GO:0032454: histone demethylase activity (H3-K9 specific)7.34E-04
26GO:0004776: succinate-CoA ligase (GDP-forming) activity7.34E-04
27GO:0010297: heteropolysaccharide binding7.34E-04
28GO:0004806: triglyceride lipase activity9.50E-04
29GO:0050660: flavin adenine dinucleotide binding1.05E-03
30GO:0005262: calcium channel activity1.08E-03
31GO:0005388: calcium-transporting ATPase activity1.08E-03
32GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity1.19E-03
33GO:0031683: G-protein beta/gamma-subunit complex binding1.19E-03
34GO:0004751: ribose-5-phosphate isomerase activity1.19E-03
35GO:0004383: guanylate cyclase activity1.19E-03
36GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity1.19E-03
37GO:0001664: G-protein coupled receptor binding1.19E-03
38GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity1.19E-03
39GO:0005516: calmodulin binding1.22E-03
40GO:0005217: intracellular ligand-gated ion channel activity1.36E-03
41GO:0004970: ionotropic glutamate receptor activity1.36E-03
42GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.45E-03
43GO:0042299: lupeol synthase activity1.71E-03
44GO:0010178: IAA-amino acid conjugate hydrolase activity1.71E-03
45GO:0017089: glycolipid transporter activity1.71E-03
46GO:0035529: NADH pyrophosphatase activity1.71E-03
47GO:0016866: intramolecular transferase activity2.30E-03
48GO:0042936: dipeptide transporter activity2.30E-03
49GO:0051861: glycolipid binding2.30E-03
50GO:0009055: electron carrier activity2.66E-03
51GO:0047631: ADP-ribose diphosphatase activity2.93E-03
52GO:0015301: anion:anion antiporter activity2.93E-03
53GO:0005452: inorganic anion exchanger activity2.93E-03
54GO:0047714: galactolipase activity3.63E-03
55GO:0000210: NAD+ diphosphatase activity3.63E-03
56GO:0004029: aldehyde dehydrogenase (NAD) activity3.63E-03
57GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity3.63E-03
58GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity3.63E-03
59GO:0004866: endopeptidase inhibitor activity3.63E-03
60GO:0005261: cation channel activity4.37E-03
61GO:0004656: procollagen-proline 4-dioxygenase activity4.37E-03
62GO:0004723: calcium-dependent protein serine/threonine phosphatase activity4.37E-03
63GO:0008113: peptide-methionine (S)-S-oxide reductase activity4.37E-03
64GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity4.37E-03
65GO:0015035: protein disulfide oxidoreductase activity4.77E-03
66GO:0008320: protein transmembrane transporter activity5.15E-03
67GO:0051213: dioxygenase activity5.96E-03
68GO:0004033: aldo-keto reductase (NADP) activity5.99E-03
69GO:0052747: sinapyl alcohol dehydrogenase activity5.99E-03
70GO:0004564: beta-fructofuranosidase activity5.99E-03
71GO:0008970: phosphatidylcholine 1-acylhydrolase activity6.87E-03
72GO:0030247: polysaccharide binding7.03E-03
73GO:0008757: S-adenosylmethionine-dependent methyltransferase activity7.40E-03
74GO:0015238: drug transmembrane transporter activity8.19E-03
75GO:0031490: chromatin DNA binding8.75E-03
76GO:0016844: strictosidine synthase activity8.75E-03
77GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity8.75E-03
78GO:0004575: sucrose alpha-glucosidase activity8.75E-03
79GO:0030145: manganese ion binding9.01E-03
80GO:0008171: O-methyltransferase activity9.76E-03
81GO:0030246: carbohydrate binding1.08E-02
82GO:0000976: transcription regulatory region sequence-specific DNA binding1.19E-02
83GO:0045551: cinnamyl-alcohol dehydrogenase activity1.19E-02
84GO:0004364: glutathione transferase activity1.23E-02
85GO:0004022: alcohol dehydrogenase (NAD) activity1.30E-02
86GO:0008061: chitin binding1.54E-02
87GO:0030552: cAMP binding1.54E-02
88GO:0030553: cGMP binding1.54E-02
89GO:0001046: core promoter sequence-specific DNA binding1.79E-02
90GO:0031418: L-ascorbic acid binding1.79E-02
91GO:0005509: calcium ion binding1.90E-02
92GO:0008234: cysteine-type peptidase activity1.91E-02
93GO:0045330: aspartyl esterase activity1.91E-02
94GO:0005216: ion channel activity1.92E-02
95GO:0045735: nutrient reservoir activity2.04E-02
96GO:0004707: MAP kinase activity2.05E-02
97GO:0016779: nucleotidyltransferase activity2.19E-02
98GO:0030599: pectinesterase activity2.32E-02
99GO:0004499: N,N-dimethylaniline monooxygenase activity2.47E-02
100GO:0003756: protein disulfide isomerase activity2.47E-02
101GO:0005451: monovalent cation:proton antiporter activity2.77E-02
102GO:0005249: voltage-gated potassium channel activity2.77E-02
103GO:0030551: cyclic nucleotide binding2.77E-02
104GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.92E-02
105GO:0005199: structural constituent of cell wall2.92E-02
106GO:0016740: transferase activity2.94E-02
107GO:0050662: coenzyme binding3.07E-02
108GO:0016853: isomerase activity3.07E-02
109GO:0015299: solute:proton antiporter activity3.07E-02
110GO:0043565: sequence-specific DNA binding3.28E-02
111GO:0046872: metal ion binding3.37E-02
112GO:0030170: pyridoxal phosphate binding3.42E-02
113GO:0005507: copper ion binding3.68E-02
114GO:0015385: sodium:proton antiporter activity3.72E-02
115GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.72E-02
116GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.96E-02
117GO:0046910: pectinesterase inhibitor activity3.96E-02
118GO:0008237: metallopeptidase activity4.05E-02
119GO:0015297: antiporter activity4.05E-02
120GO:0008483: transaminase activity4.05E-02
121GO:0004683: calmodulin-dependent protein kinase activity4.94E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane1.78E-06
2GO:0016021: integral component of membrane4.44E-06
3GO:0005911: cell-cell junction3.37E-04
4GO:0030134: ER to Golgi transport vesicle7.34E-04
5GO:0005783: endoplasmic reticulum1.16E-03
6GO:0009530: primary cell wall1.19E-03
7GO:0005576: extracellular region1.57E-03
8GO:0005618: cell wall3.12E-03
9GO:0071944: cell periphery4.69E-03
10GO:0048046: apoplast1.54E-02
11GO:0005829: cytosol2.04E-02
12GO:0005770: late endosome2.92E-02
13GO:0000785: chromatin3.55E-02
14GO:0016592: mediator complex3.55E-02
15GO:0032580: Golgi cisterna membrane3.88E-02
16GO:0043231: intracellular membrane-bounded organelle3.88E-02
17GO:0005788: endoplasmic reticulum lumen4.58E-02
18GO:0005887: integral component of plasma membrane5.00E-02
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Gene type



Gene DE type