Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G13050

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0072660: maintenance of protein location in plasma membrane0.00E+00
2GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)0.00E+00
3GO:0019428: allantoin biosynthetic process0.00E+00
4GO:0006144: purine nucleobase metabolic process1.39E-05
5GO:0001560: regulation of cell growth by extracellular stimulus1.39E-05
6GO:0000077: DNA damage checkpoint1.39E-05
7GO:0019628: urate catabolic process1.39E-05
8GO:0051245: negative regulation of cellular defense response1.39E-05
9GO:0016998: cell wall macromolecule catabolic process2.43E-05
10GO:0080181: lateral root branching3.65E-05
11GO:0040020: regulation of meiotic nuclear division3.65E-05
12GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)3.65E-05
13GO:0051258: protein polymerization3.65E-05
14GO:1900140: regulation of seedling development6.55E-05
15GO:0072661: protein targeting to plasma membrane6.55E-05
16GO:0015695: organic cation transport6.55E-05
17GO:0006612: protein targeting to membrane9.94E-05
18GO:0015696: ammonium transport9.94E-05
19GO:0071323: cellular response to chitin9.94E-05
20GO:0051289: protein homotetramerization9.94E-05
21GO:0000187: activation of MAPK activity9.94E-05
22GO:0046713: borate transport9.94E-05
23GO:0010148: transpiration9.94E-05
24GO:0000460: maturation of 5.8S rRNA1.37E-04
25GO:0060548: negative regulation of cell death1.37E-04
26GO:0072488: ammonium transmembrane transport1.37E-04
27GO:0010363: regulation of plant-type hypersensitive response1.37E-04
28GO:0060918: auxin transport2.22E-04
29GO:0000470: maturation of LSU-rRNA2.22E-04
30GO:0071446: cellular response to salicylic acid stimulus3.15E-04
31GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline3.65E-04
32GO:0006468: protein phosphorylation3.99E-04
33GO:0009742: brassinosteroid mediated signaling pathway4.04E-04
34GO:2000031: regulation of salicylic acid mediated signaling pathway4.16E-04
35GO:0010497: plasmodesmata-mediated intercellular transport4.16E-04
36GO:0010332: response to gamma radiation4.68E-04
37GO:2000280: regulation of root development5.23E-04
38GO:0006032: chitin catabolic process5.78E-04
39GO:0043069: negative regulation of programmed cell death5.78E-04
40GO:0007166: cell surface receptor signaling pathway7.35E-04
41GO:0080147: root hair cell development1.00E-03
42GO:0009863: salicylic acid mediated signaling pathway1.00E-03
43GO:0048278: vesicle docking1.13E-03
44GO:0009409: response to cold1.15E-03
45GO:0009814: defense response, incompatible interaction1.20E-03
46GO:0031348: negative regulation of defense response1.20E-03
47GO:0009306: protein secretion1.34E-03
48GO:0009789: positive regulation of abscisic acid-activated signaling pathway1.41E-03
49GO:0010051: xylem and phloem pattern formation1.49E-03
50GO:0061025: membrane fusion1.64E-03
51GO:0006906: vesicle fusion2.48E-03
52GO:0008219: cell death2.75E-03
53GO:0010311: lateral root formation2.84E-03
54GO:0010119: regulation of stomatal movement3.03E-03
55GO:0009631: cold acclimation3.03E-03
56GO:0009867: jasmonic acid mediated signaling pathway3.22E-03
57GO:0045087: innate immune response3.22E-03
58GO:0006887: exocytosis3.63E-03
59GO:0000165: MAPK cascade4.36E-03
60GO:0031347: regulation of defense response4.36E-03
61GO:0009620: response to fungus5.62E-03
62GO:0018105: peptidyl-serine phosphorylation6.10E-03
63GO:0006413: translational initiation8.32E-03
64GO:0010150: leaf senescence8.74E-03
65GO:0009737: response to abscisic acid1.31E-02
66GO:0080167: response to karrikin1.38E-02
67GO:0010200: response to chitin1.42E-02
68GO:0016192: vesicle-mediated transport1.43E-02
69GO:0046777: protein autophosphorylation1.45E-02
70GO:0006886: intracellular protein transport1.61E-02
71GO:0016042: lipid catabolic process1.79E-02
72GO:0050832: defense response to fungus1.84E-02
73GO:0035556: intracellular signal transduction2.85E-02
74GO:0006952: defense response3.43E-02
75GO:0042742: defense response to bacterium4.54E-02
RankGO TermAdjusted P value
1GO:0033971: hydroxyisourate hydrolase activity0.00E+00
2GO:0051997: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity0.00E+00
3GO:0052861: glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group0.00E+00
4GO:0008061: chitin binding1.46E-05
5GO:0043021: ribonucleoprotein complex binding3.65E-05
6GO:0043495: protein anchor1.37E-04
7GO:0008519: ammonium transmembrane transporter activity2.22E-04
8GO:0004656: procollagen-proline 4-dioxygenase activity2.68E-04
9GO:0004708: MAP kinase kinase activity3.65E-04
10GO:0004714: transmembrane receptor protein tyrosine kinase activity3.65E-04
11GO:0004568: chitinase activity5.78E-04
12GO:0004675: transmembrane receptor protein serine/threonine kinase activity6.05E-04
13GO:0033612: receptor serine/threonine kinase binding1.13E-03
14GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity2.13E-03
15GO:0009931: calcium-dependent protein serine/threonine kinase activity2.48E-03
16GO:0004683: calmodulin-dependent protein kinase activity2.57E-03
17GO:0016798: hydrolase activity, acting on glycosyl bonds2.57E-03
18GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity2.75E-03
19GO:0030145: manganese ion binding3.03E-03
20GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.22E-03
21GO:0000149: SNARE binding3.42E-03
22GO:0005484: SNAP receptor activity3.83E-03
23GO:0005515: protein binding4.58E-03
24GO:0016298: lipase activity4.81E-03
25GO:0031625: ubiquitin protein ligase binding5.03E-03
26GO:0045735: nutrient reservoir activity5.26E-03
27GO:0016301: kinase activity6.79E-03
28GO:0004672: protein kinase activity9.04E-03
29GO:0003743: translation initiation factor activity9.75E-03
30GO:0016788: hydrolase activity, acting on ester bonds1.20E-02
31GO:0052689: carboxylic ester hydrolase activity1.48E-02
32GO:0042803: protein homodimerization activity1.62E-02
33GO:0005524: ATP binding2.54E-02
34GO:0000166: nucleotide binding2.74E-02
35GO:0004674: protein serine/threonine kinase activity3.05E-02
36GO:0005516: calmodulin binding3.67E-02
37GO:0005525: GTP binding3.91E-02
38GO:0005509: calcium ion binding4.28E-02
RankGO TermAdjusted P value
1GO:0031234: extrinsic component of cytoplasmic side of plasma membrane1.39E-05
2GO:0070545: PeBoW complex3.65E-05
3GO:0005851: eukaryotic translation initiation factor 2B complex2.22E-04
4GO:0030687: preribosome, large subunit precursor3.15E-04
5GO:0005802: trans-Golgi network5.96E-04
6GO:0009506: plasmodesma1.03E-03
7GO:0009504: cell plate1.72E-03
8GO:0000151: ubiquitin ligase complex2.75E-03
9GO:0031201: SNARE complex3.63E-03
10GO:0005886: plasma membrane4.47E-03
11GO:0031225: anchored component of membrane4.75E-03
12GO:0005834: heterotrimeric G-protein complex5.50E-03
13GO:0005768: endosome5.54E-03
14GO:0005654: nucleoplasm6.86E-03
15GO:0046658: anchored component of plasma membrane1.06E-02
16GO:0080008: Cul4-RING E3 ubiquitin ligase complex1.27E-02
17GO:0005887: integral component of plasma membrane2.27E-02
18GO:0005576: extracellular region2.45E-02
19GO:0005618: cell wall2.45E-02
20GO:0005794: Golgi apparatus3.01E-02
21GO:0005777: peroxisome3.03E-02
22GO:0016021: integral component of membrane4.36E-02
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Gene type



Gene DE type