GO Enrichment Analysis of Co-expressed Genes with
AT3G12685
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 2 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 3 | GO:0006429: leucyl-tRNA aminoacylation | 0.00E+00 |
| 4 | GO:0045176: apical protein localization | 0.00E+00 |
| 5 | GO:0006223: uracil salvage | 0.00E+00 |
| 6 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 7 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 8 | GO:0080114: positive regulation of glycine hydroxymethyltransferase activity | 0.00E+00 |
| 9 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 10 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 11 | GO:1904966: positive regulation of vitamin E biosynthetic process | 0.00E+00 |
| 12 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 13 | GO:1904964: positive regulation of phytol biosynthetic process | 0.00E+00 |
| 14 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 15 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 0.00E+00 |
| 16 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 17 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 18 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 19 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 20 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 21 | GO:0015979: photosynthesis | 1.40E-16 |
| 22 | GO:0032544: plastid translation | 4.44E-14 |
| 23 | GO:0009773: photosynthetic electron transport in photosystem I | 2.17E-12 |
| 24 | GO:0009658: chloroplast organization | 4.31E-12 |
| 25 | GO:0010027: thylakoid membrane organization | 2.84E-08 |
| 26 | GO:0009735: response to cytokinin | 6.65E-07 |
| 27 | GO:0006412: translation | 1.34E-06 |
| 28 | GO:0010196: nonphotochemical quenching | 1.49E-06 |
| 29 | GO:0018298: protein-chromophore linkage | 2.13E-05 |
| 30 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 2.87E-05 |
| 31 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 2.87E-05 |
| 32 | GO:0042254: ribosome biogenesis | 4.16E-05 |
| 33 | GO:1901259: chloroplast rRNA processing | 4.20E-05 |
| 34 | GO:0010207: photosystem II assembly | 4.50E-05 |
| 35 | GO:0006810: transport | 8.52E-05 |
| 36 | GO:0006518: peptide metabolic process | 9.13E-05 |
| 37 | GO:0006000: fructose metabolic process | 9.13E-05 |
| 38 | GO:0009657: plastid organization | 1.26E-04 |
| 39 | GO:0015995: chlorophyll biosynthetic process | 1.55E-04 |
| 40 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.87E-04 |
| 41 | GO:0016117: carotenoid biosynthetic process | 2.31E-04 |
| 42 | GO:0006546: glycine catabolic process | 3.11E-04 |
| 43 | GO:0009765: photosynthesis, light harvesting | 3.11E-04 |
| 44 | GO:0045727: positive regulation of translation | 3.11E-04 |
| 45 | GO:0055114: oxidation-reduction process | 4.10E-04 |
| 46 | GO:0032543: mitochondrial translation | 4.64E-04 |
| 47 | GO:0010236: plastoquinone biosynthetic process | 4.64E-04 |
| 48 | GO:0045038: protein import into chloroplast thylakoid membrane | 4.64E-04 |
| 49 | GO:0031365: N-terminal protein amino acid modification | 4.64E-04 |
| 50 | GO:0032502: developmental process | 4.71E-04 |
| 51 | GO:0006094: gluconeogenesis | 4.72E-04 |
| 52 | GO:0009409: response to cold | 5.01E-04 |
| 53 | GO:0019253: reductive pentose-phosphate cycle | 5.53E-04 |
| 54 | GO:0042549: photosystem II stabilization | 6.43E-04 |
| 55 | GO:0010190: cytochrome b6f complex assembly | 6.43E-04 |
| 56 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 6.43E-04 |
| 57 | GO:1902458: positive regulation of stomatal opening | 8.29E-04 |
| 58 | GO:0009443: pyridoxal 5'-phosphate salvage | 8.29E-04 |
| 59 | GO:0071588: hydrogen peroxide mediated signaling pathway | 8.29E-04 |
| 60 | GO:0060627: regulation of vesicle-mediated transport | 8.29E-04 |
| 61 | GO:0043489: RNA stabilization | 8.29E-04 |
| 62 | GO:0033481: galacturonate biosynthetic process | 8.29E-04 |
| 63 | GO:0042371: vitamin K biosynthetic process | 8.29E-04 |
| 64 | GO:0043686: co-translational protein modification | 8.29E-04 |
| 65 | GO:0030488: tRNA methylation | 8.48E-04 |
| 66 | GO:0042026: protein refolding | 8.48E-04 |
| 67 | GO:0061077: chaperone-mediated protein folding | 1.08E-03 |
| 68 | GO:0006096: glycolytic process | 1.14E-03 |
| 69 | GO:0042255: ribosome assembly | 1.34E-03 |
| 70 | GO:0006353: DNA-templated transcription, termination | 1.34E-03 |
| 71 | GO:0048564: photosystem I assembly | 1.34E-03 |
| 72 | GO:0008610: lipid biosynthetic process | 1.34E-03 |
| 73 | GO:0006002: fructose 6-phosphate metabolic process | 1.64E-03 |
| 74 | GO:0009853: photorespiration | 1.64E-03 |
| 75 | GO:0071482: cellular response to light stimulus | 1.64E-03 |
| 76 | GO:0034755: iron ion transmembrane transport | 1.80E-03 |
| 77 | GO:0006729: tetrahydrobiopterin biosynthetic process | 1.80E-03 |
| 78 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 1.80E-03 |
| 79 | GO:0010270: photosystem II oxygen evolving complex assembly | 1.80E-03 |
| 80 | GO:0009662: etioplast organization | 1.80E-03 |
| 81 | GO:0097054: L-glutamate biosynthetic process | 1.80E-03 |
| 82 | GO:1904143: positive regulation of carotenoid biosynthetic process | 1.80E-03 |
| 83 | GO:0080183: response to photooxidative stress | 1.80E-03 |
| 84 | GO:0045454: cell redox homeostasis | 1.81E-03 |
| 85 | GO:0042335: cuticle development | 1.86E-03 |
| 86 | GO:0000373: Group II intron splicing | 1.98E-03 |
| 87 | GO:1900865: chloroplast RNA modification | 2.34E-03 |
| 88 | GO:0019252: starch biosynthetic process | 2.46E-03 |
| 89 | GO:0006457: protein folding | 2.51E-03 |
| 90 | GO:0045036: protein targeting to chloroplast | 2.74E-03 |
| 91 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 2.98E-03 |
| 92 | GO:0090506: axillary shoot meristem initiation | 2.98E-03 |
| 93 | GO:0000913: preprophase band assembly | 2.98E-03 |
| 94 | GO:0090391: granum assembly | 2.98E-03 |
| 95 | GO:0051604: protein maturation | 2.98E-03 |
| 96 | GO:0071492: cellular response to UV-A | 2.98E-03 |
| 97 | GO:0006696: ergosterol biosynthetic process | 2.98E-03 |
| 98 | GO:0015675: nickel cation transport | 2.98E-03 |
| 99 | GO:0010581: regulation of starch biosynthetic process | 2.98E-03 |
| 100 | GO:0030865: cortical cytoskeleton organization | 2.98E-03 |
| 101 | GO:0006013: mannose metabolic process | 2.98E-03 |
| 102 | GO:0006415: translational termination | 3.18E-03 |
| 103 | GO:0009073: aromatic amino acid family biosynthetic process | 3.18E-03 |
| 104 | GO:0043085: positive regulation of catalytic activity | 3.18E-03 |
| 105 | GO:0006352: DNA-templated transcription, initiation | 3.18E-03 |
| 106 | GO:0018119: peptidyl-cysteine S-nitrosylation | 3.18E-03 |
| 107 | GO:0045037: protein import into chloroplast stroma | 3.65E-03 |
| 108 | GO:0009767: photosynthetic electron transport chain | 4.15E-03 |
| 109 | GO:0005986: sucrose biosynthetic process | 4.15E-03 |
| 110 | GO:0016556: mRNA modification | 4.34E-03 |
| 111 | GO:0006537: glutamate biosynthetic process | 4.34E-03 |
| 112 | GO:0051085: chaperone mediated protein folding requiring cofactor | 4.34E-03 |
| 113 | GO:0009152: purine ribonucleotide biosynthetic process | 4.34E-03 |
| 114 | GO:0010731: protein glutathionylation | 4.34E-03 |
| 115 | GO:0006424: glutamyl-tRNA aminoacylation | 4.34E-03 |
| 116 | GO:0046653: tetrahydrofolate metabolic process | 4.34E-03 |
| 117 | GO:1901332: negative regulation of lateral root development | 4.34E-03 |
| 118 | GO:0006241: CTP biosynthetic process | 4.34E-03 |
| 119 | GO:0043572: plastid fission | 4.34E-03 |
| 120 | GO:0055070: copper ion homeostasis | 4.34E-03 |
| 121 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 4.34E-03 |
| 122 | GO:2001141: regulation of RNA biosynthetic process | 4.34E-03 |
| 123 | GO:0006165: nucleoside diphosphate phosphorylation | 4.34E-03 |
| 124 | GO:0006228: UTP biosynthetic process | 4.34E-03 |
| 125 | GO:0046686: response to cadmium ion | 4.57E-03 |
| 126 | GO:0010020: chloroplast fission | 4.70E-03 |
| 127 | GO:0090351: seedling development | 5.27E-03 |
| 128 | GO:0044206: UMP salvage | 5.87E-03 |
| 129 | GO:0019676: ammonia assimilation cycle | 5.87E-03 |
| 130 | GO:0071486: cellular response to high light intensity | 5.87E-03 |
| 131 | GO:0051781: positive regulation of cell division | 5.87E-03 |
| 132 | GO:0031122: cytoplasmic microtubule organization | 5.87E-03 |
| 133 | GO:0019464: glycine decarboxylation via glycine cleavage system | 5.87E-03 |
| 134 | GO:0006183: GTP biosynthetic process | 5.87E-03 |
| 135 | GO:0071483: cellular response to blue light | 5.87E-03 |
| 136 | GO:0015994: chlorophyll metabolic process | 5.87E-03 |
| 137 | GO:0010021: amylopectin biosynthetic process | 5.87E-03 |
| 138 | GO:0006808: regulation of nitrogen utilization | 5.87E-03 |
| 139 | GO:0010025: wax biosynthetic process | 5.89E-03 |
| 140 | GO:0009817: defense response to fungus, incompatible interaction | 6.10E-03 |
| 141 | GO:0009793: embryo development ending in seed dormancy | 6.51E-03 |
| 142 | GO:0006869: lipid transport | 6.98E-03 |
| 143 | GO:0007017: microtubule-based process | 7.24E-03 |
| 144 | GO:0009768: photosynthesis, light harvesting in photosystem I | 7.24E-03 |
| 145 | GO:0006418: tRNA aminoacylation for protein translation | 7.24E-03 |
| 146 | GO:0006461: protein complex assembly | 7.55E-03 |
| 147 | GO:0043097: pyrimidine nucleoside salvage | 7.55E-03 |
| 148 | GO:0000304: response to singlet oxygen | 7.55E-03 |
| 149 | GO:0016123: xanthophyll biosynthetic process | 7.55E-03 |
| 150 | GO:0080110: sporopollenin biosynthetic process | 7.55E-03 |
| 151 | GO:0006564: L-serine biosynthetic process | 7.55E-03 |
| 152 | GO:0016120: carotene biosynthetic process | 7.55E-03 |
| 153 | GO:0031408: oxylipin biosynthetic process | 7.97E-03 |
| 154 | GO:0016226: iron-sulfur cluster assembly | 8.74E-03 |
| 155 | GO:0048827: phyllome development | 9.39E-03 |
| 156 | GO:0009913: epidermal cell differentiation | 9.39E-03 |
| 157 | GO:0006655: phosphatidylglycerol biosynthetic process | 9.39E-03 |
| 158 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 9.39E-03 |
| 159 | GO:0000470: maturation of LSU-rRNA | 9.39E-03 |
| 160 | GO:0010358: leaf shaping | 9.39E-03 |
| 161 | GO:0006014: D-ribose metabolic process | 9.39E-03 |
| 162 | GO:0006828: manganese ion transport | 9.39E-03 |
| 163 | GO:0006206: pyrimidine nucleobase metabolic process | 9.39E-03 |
| 164 | GO:0032973: amino acid export | 9.39E-03 |
| 165 | GO:0009411: response to UV | 9.55E-03 |
| 166 | GO:0009416: response to light stimulus | 1.00E-02 |
| 167 | GO:2000033: regulation of seed dormancy process | 1.14E-02 |
| 168 | GO:0042372: phylloquinone biosynthetic process | 1.14E-02 |
| 169 | GO:0009955: adaxial/abaxial pattern specification | 1.14E-02 |
| 170 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.14E-02 |
| 171 | GO:0006458: 'de novo' protein folding | 1.14E-02 |
| 172 | GO:0017148: negative regulation of translation | 1.14E-02 |
| 173 | GO:0010189: vitamin E biosynthetic process | 1.14E-02 |
| 174 | GO:0010067: procambium histogenesis | 1.14E-02 |
| 175 | GO:0009854: oxidative photosynthetic carbon pathway | 1.14E-02 |
| 176 | GO:0010019: chloroplast-nucleus signaling pathway | 1.14E-02 |
| 177 | GO:0000413: protein peptidyl-prolyl isomerization | 1.22E-02 |
| 178 | GO:0009644: response to high light intensity | 1.27E-02 |
| 179 | GO:0009741: response to brassinosteroid | 1.32E-02 |
| 180 | GO:0050829: defense response to Gram-negative bacterium | 1.35E-02 |
| 181 | GO:0006826: iron ion transport | 1.35E-02 |
| 182 | GO:0009772: photosynthetic electron transport in photosystem II | 1.35E-02 |
| 183 | GO:0043090: amino acid import | 1.35E-02 |
| 184 | GO:0009645: response to low light intensity stimulus | 1.35E-02 |
| 185 | GO:0006400: tRNA modification | 1.35E-02 |
| 186 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 1.35E-02 |
| 187 | GO:0008654: phospholipid biosynthetic process | 1.53E-02 |
| 188 | GO:0042538: hyperosmotic salinity response | 1.54E-02 |
| 189 | GO:0009938: negative regulation of gibberellic acid mediated signaling pathway | 1.58E-02 |
| 190 | GO:0045292: mRNA cis splicing, via spliceosome | 1.58E-02 |
| 191 | GO:0006605: protein targeting | 1.58E-02 |
| 192 | GO:0009704: de-etiolation | 1.58E-02 |
| 193 | GO:2000070: regulation of response to water deprivation | 1.58E-02 |
| 194 | GO:0045010: actin nucleation | 1.58E-02 |
| 195 | GO:0010492: maintenance of shoot apical meristem identity | 1.58E-02 |
| 196 | GO:0006364: rRNA processing | 1.68E-02 |
| 197 | GO:0016032: viral process | 1.75E-02 |
| 198 | GO:0017004: cytochrome complex assembly | 1.81E-02 |
| 199 | GO:0019430: removal of superoxide radicals | 1.81E-02 |
| 200 | GO:0015996: chlorophyll catabolic process | 1.81E-02 |
| 201 | GO:0007186: G-protein coupled receptor signaling pathway | 1.81E-02 |
| 202 | GO:0000902: cell morphogenesis | 2.06E-02 |
| 203 | GO:0010206: photosystem II repair | 2.06E-02 |
| 204 | GO:0080144: amino acid homeostasis | 2.06E-02 |
| 205 | GO:0009051: pentose-phosphate shunt, oxidative branch | 2.06E-02 |
| 206 | GO:0006098: pentose-phosphate shunt | 2.06E-02 |
| 207 | GO:0048507: meristem development | 2.06E-02 |
| 208 | GO:0031425: chloroplast RNA processing | 2.32E-02 |
| 209 | GO:0042761: very long-chain fatty acid biosynthetic process | 2.32E-02 |
| 210 | GO:0010380: regulation of chlorophyll biosynthetic process | 2.32E-02 |
| 211 | GO:0006535: cysteine biosynthetic process from serine | 2.60E-02 |
| 212 | GO:0019538: protein metabolic process | 2.60E-02 |
| 213 | GO:0006396: RNA processing | 2.73E-02 |
| 214 | GO:0000038: very long-chain fatty acid metabolic process | 2.88E-02 |
| 215 | GO:0006879: cellular iron ion homeostasis | 2.88E-02 |
| 216 | GO:0006816: calcium ion transport | 2.88E-02 |
| 217 | GO:0000272: polysaccharide catabolic process | 2.88E-02 |
| 218 | GO:0006508: proteolysis | 3.01E-02 |
| 219 | GO:0016024: CDP-diacylglycerol biosynthetic process | 3.17E-02 |
| 220 | GO:0010628: positive regulation of gene expression | 3.48E-02 |
| 221 | GO:0006006: glucose metabolic process | 3.48E-02 |
| 222 | GO:0010229: inflorescence development | 3.48E-02 |
| 223 | GO:0030036: actin cytoskeleton organization | 3.48E-02 |
| 224 | GO:0009631: cold acclimation | 3.59E-02 |
| 225 | GO:0010540: basipetal auxin transport | 3.79E-02 |
| 226 | GO:0010143: cutin biosynthetic process | 3.79E-02 |
| 227 | GO:0010223: secondary shoot formation | 3.79E-02 |
| 228 | GO:0009637: response to blue light | 3.93E-02 |
| 229 | GO:0009867: jasmonic acid mediated signaling pathway | 3.93E-02 |
| 230 | GO:0016051: carbohydrate biosynthetic process | 3.93E-02 |
| 231 | GO:0042744: hydrogen peroxide catabolic process | 4.09E-02 |
| 232 | GO:0055085: transmembrane transport | 4.10E-02 |
| 233 | GO:0046688: response to copper ion | 4.11E-02 |
| 234 | GO:0009225: nucleotide-sugar metabolic process | 4.11E-02 |
| 235 | GO:0010039: response to iron ion | 4.11E-02 |
| 236 | GO:0034599: cellular response to oxidative stress | 4.11E-02 |
| 237 | GO:0005985: sucrose metabolic process | 4.11E-02 |
| 238 | GO:0009790: embryo development | 4.21E-02 |
| 239 | GO:0019762: glucosinolate catabolic process | 4.44E-02 |
| 240 | GO:0006839: mitochondrial transport | 4.47E-02 |
| 241 | GO:0006633: fatty acid biosynthetic process | 4.61E-02 |
| 242 | GO:0010187: negative regulation of seed germination | 4.78E-02 |
| 243 | GO:0019344: cysteine biosynthetic process | 4.78E-02 |
| 244 | GO:0009116: nucleoside metabolic process | 4.78E-02 |
| 245 | GO:0000027: ribosomal large subunit assembly | 4.78E-02 |
| 246 | GO:0009863: salicylic acid mediated signaling pathway | 4.78E-02 |
| 247 | GO:2000377: regulation of reactive oxygen species metabolic process | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 2 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 3 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 4 | GO:0051738: xanthophyll binding | 0.00E+00 |
| 5 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 6 | GO:0005048: signal sequence binding | 0.00E+00 |
| 7 | GO:0046608: carotenoid isomerase activity | 0.00E+00 |
| 8 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 9 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 10 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 0.00E+00 |
| 11 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 12 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 13 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 14 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 15 | GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity | 0.00E+00 |
| 16 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 0.00E+00 |
| 17 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 18 | GO:0004823: leucine-tRNA ligase activity | 0.00E+00 |
| 19 | GO:0004561: alpha-N-acetylglucosaminidase activity | 0.00E+00 |
| 20 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 21 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 22 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 23 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 24 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 25 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 26 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 27 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 28 | GO:0019843: rRNA binding | 1.09E-24 |
| 29 | GO:0003735: structural constituent of ribosome | 5.86E-07 |
| 30 | GO:0016168: chlorophyll binding | 7.34E-07 |
| 31 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.22E-06 |
| 32 | GO:0004033: aldo-keto reductase (NADP) activity | 2.63E-06 |
| 33 | GO:0022891: substrate-specific transmembrane transporter activity | 1.28E-05 |
| 34 | GO:0004047: aminomethyltransferase activity | 2.87E-05 |
| 35 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 2.87E-05 |
| 36 | GO:0031072: heat shock protein binding | 3.50E-05 |
| 37 | GO:0051082: unfolded protein binding | 6.42E-05 |
| 38 | GO:0005528: FK506 binding | 8.65E-05 |
| 39 | GO:0002161: aminoacyl-tRNA editing activity | 9.13E-05 |
| 40 | GO:0004148: dihydrolipoyl dehydrogenase activity | 9.13E-05 |
| 41 | GO:0004176: ATP-dependent peptidase activity | 1.25E-04 |
| 42 | GO:0016149: translation release factor activity, codon specific | 1.87E-04 |
| 43 | GO:0004222: metalloendopeptidase activity | 2.34E-04 |
| 44 | GO:0043495: protein anchor | 3.11E-04 |
| 45 | GO:0001053: plastid sigma factor activity | 3.11E-04 |
| 46 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 3.11E-04 |
| 47 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 3.11E-04 |
| 48 | GO:0016987: sigma factor activity | 3.11E-04 |
| 49 | GO:0008266: poly(U) RNA binding | 5.53E-04 |
| 50 | GO:0008237: metallopeptidase activity | 6.32E-04 |
| 51 | GO:0042586: peptide deformylase activity | 8.29E-04 |
| 52 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 8.29E-04 |
| 53 | GO:0010012: steroid 22-alpha hydroxylase activity | 8.29E-04 |
| 54 | GO:0051996: squalene synthase activity | 8.29E-04 |
| 55 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 8.29E-04 |
| 56 | GO:0009496: plastoquinol--plastocyanin reductase activity | 8.29E-04 |
| 57 | GO:0047259: glucomannan 4-beta-mannosyltransferase activity | 8.29E-04 |
| 58 | GO:0008568: microtubule-severing ATPase activity | 8.29E-04 |
| 59 | GO:0004321: fatty-acyl-CoA synthase activity | 8.29E-04 |
| 60 | GO:0005080: protein kinase C binding | 8.29E-04 |
| 61 | GO:0016041: glutamate synthase (ferredoxin) activity | 8.29E-04 |
| 62 | GO:0003867: 4-aminobutyrate transaminase activity | 8.29E-04 |
| 63 | GO:0030941: chloroplast targeting sequence binding | 8.29E-04 |
| 64 | GO:0051920: peroxiredoxin activity | 8.48E-04 |
| 65 | GO:0003723: RNA binding | 8.60E-04 |
| 66 | GO:0019899: enzyme binding | 1.08E-03 |
| 67 | GO:0016209: antioxidant activity | 1.34E-03 |
| 68 | GO:0005525: GTP binding | 1.78E-03 |
| 69 | GO:0004618: phosphoglycerate kinase activity | 1.80E-03 |
| 70 | GO:0010297: heteropolysaccharide binding | 1.80E-03 |
| 71 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 1.80E-03 |
| 72 | GO:0008967: phosphoglycolate phosphatase activity | 1.80E-03 |
| 73 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.80E-03 |
| 74 | GO:0016630: protochlorophyllide reductase activity | 1.80E-03 |
| 75 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 1.80E-03 |
| 76 | GO:0033201: alpha-1,4-glucan synthase activity | 1.80E-03 |
| 77 | GO:0004802: transketolase activity | 1.80E-03 |
| 78 | GO:0015099: nickel cation transmembrane transporter activity | 1.80E-03 |
| 79 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 1.80E-03 |
| 80 | GO:0050017: L-3-cyanoalanine synthase activity | 1.80E-03 |
| 81 | GO:0047746: chlorophyllase activity | 1.80E-03 |
| 82 | GO:0003747: translation release factor activity | 1.98E-03 |
| 83 | GO:0050662: coenzyme binding | 2.25E-03 |
| 84 | GO:0008047: enzyme activator activity | 2.74E-03 |
| 85 | GO:0003924: GTPase activity | 2.88E-03 |
| 86 | GO:0008864: formyltetrahydrofolate deformylase activity | 2.98E-03 |
| 87 | GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | 2.98E-03 |
| 88 | GO:0070330: aromatase activity | 2.98E-03 |
| 89 | GO:0004373: glycogen (starch) synthase activity | 2.98E-03 |
| 90 | GO:0017150: tRNA dihydrouridine synthase activity | 2.98E-03 |
| 91 | GO:0003913: DNA photolyase activity | 2.98E-03 |
| 92 | GO:0030267: glyoxylate reductase (NADP) activity | 2.98E-03 |
| 93 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 2.98E-03 |
| 94 | GO:0070402: NADPH binding | 2.98E-03 |
| 95 | GO:0044183: protein binding involved in protein folding | 3.18E-03 |
| 96 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.18E-03 |
| 97 | GO:0016851: magnesium chelatase activity | 4.34E-03 |
| 98 | GO:0008508: bile acid:sodium symporter activity | 4.34E-03 |
| 99 | GO:0048487: beta-tubulin binding | 4.34E-03 |
| 100 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 4.34E-03 |
| 101 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 4.34E-03 |
| 102 | GO:0004550: nucleoside diphosphate kinase activity | 4.34E-03 |
| 103 | GO:0043023: ribosomal large subunit binding | 4.34E-03 |
| 104 | GO:0004845: uracil phosphoribosyltransferase activity | 5.87E-03 |
| 105 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 5.87E-03 |
| 106 | GO:0051861: glycolipid binding | 5.87E-03 |
| 107 | GO:0009011: starch synthase activity | 5.87E-03 |
| 108 | GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed | 5.87E-03 |
| 109 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 5.87E-03 |
| 110 | GO:0050378: UDP-glucuronate 4-epimerase activity | 5.87E-03 |
| 111 | GO:0004659: prenyltransferase activity | 5.87E-03 |
| 112 | GO:0031409: pigment binding | 5.89E-03 |
| 113 | GO:0051536: iron-sulfur cluster binding | 6.55E-03 |
| 114 | GO:0016491: oxidoreductase activity | 6.71E-03 |
| 115 | GO:0015079: potassium ion transmembrane transporter activity | 7.24E-03 |
| 116 | GO:0043424: protein histidine kinase binding | 7.24E-03 |
| 117 | GO:0004040: amidase activity | 7.55E-03 |
| 118 | GO:0003959: NADPH dehydrogenase activity | 7.55E-03 |
| 119 | GO:0008374: O-acyltransferase activity | 7.55E-03 |
| 120 | GO:0018685: alkane 1-monooxygenase activity | 7.55E-03 |
| 121 | GO:0051538: 3 iron, 4 sulfur cluster binding | 7.55E-03 |
| 122 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 7.55E-03 |
| 123 | GO:0042578: phosphoric ester hydrolase activity | 9.39E-03 |
| 124 | GO:0004605: phosphatidate cytidylyltransferase activity | 9.39E-03 |
| 125 | GO:0080030: methyl indole-3-acetate esterase activity | 9.39E-03 |
| 126 | GO:0004332: fructose-bisphosphate aldolase activity | 9.39E-03 |
| 127 | GO:0016688: L-ascorbate peroxidase activity | 9.39E-03 |
| 128 | GO:0004130: cytochrome-c peroxidase activity | 9.39E-03 |
| 129 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 9.39E-03 |
| 130 | GO:0003824: catalytic activity | 9.92E-03 |
| 131 | GO:0003727: single-stranded RNA binding | 1.04E-02 |
| 132 | GO:0004812: aminoacyl-tRNA ligase activity | 1.13E-02 |
| 133 | GO:0004124: cysteine synthase activity | 1.14E-02 |
| 134 | GO:0051753: mannan synthase activity | 1.14E-02 |
| 135 | GO:0004849: uridine kinase activity | 1.14E-02 |
| 136 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.14E-02 |
| 137 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.14E-02 |
| 138 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.14E-02 |
| 139 | GO:0004747: ribokinase activity | 1.14E-02 |
| 140 | GO:0004559: alpha-mannosidase activity | 1.14E-02 |
| 141 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.27E-02 |
| 142 | GO:0005198: structural molecule activity | 1.33E-02 |
| 143 | GO:0008235: metalloexopeptidase activity | 1.35E-02 |
| 144 | GO:0009881: photoreceptor activity | 1.35E-02 |
| 145 | GO:0004620: phospholipase activity | 1.35E-02 |
| 146 | GO:0004791: thioredoxin-disulfide reductase activity | 1.42E-02 |
| 147 | GO:0005509: calcium ion binding | 1.57E-02 |
| 148 | GO:0008865: fructokinase activity | 1.58E-02 |
| 149 | GO:0052747: sinapyl alcohol dehydrogenase activity | 1.58E-02 |
| 150 | GO:0008312: 7S RNA binding | 1.58E-02 |
| 151 | GO:0043022: ribosome binding | 1.58E-02 |
| 152 | GO:0048038: quinone binding | 1.63E-02 |
| 153 | GO:0008173: RNA methyltransferase activity | 1.81E-02 |
| 154 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 1.81E-02 |
| 155 | GO:0000989: transcription factor activity, transcription factor binding | 2.06E-02 |
| 156 | GO:0016207: 4-coumarate-CoA ligase activity | 2.06E-02 |
| 157 | GO:0003729: mRNA binding | 2.09E-02 |
| 158 | GO:0005200: structural constituent of cytoskeleton | 2.11E-02 |
| 159 | GO:0005384: manganese ion transmembrane transporter activity | 2.32E-02 |
| 160 | GO:0005381: iron ion transmembrane transporter activity | 2.32E-02 |
| 161 | GO:0016874: ligase activity | 2.44E-02 |
| 162 | GO:0030234: enzyme regulator activity | 2.60E-02 |
| 163 | GO:0005515: protein binding | 2.77E-02 |
| 164 | GO:0009055: electron carrier activity | 2.88E-02 |
| 165 | GO:0047372: acylglycerol lipase activity | 2.88E-02 |
| 166 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 2.88E-02 |
| 167 | GO:0015386: potassium:proton antiporter activity | 2.88E-02 |
| 168 | GO:0004177: aminopeptidase activity | 2.88E-02 |
| 169 | GO:0008236: serine-type peptidase activity | 2.95E-02 |
| 170 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 3.17E-02 |
| 171 | GO:0000049: tRNA binding | 3.17E-02 |
| 172 | GO:0015238: drug transmembrane transporter activity | 3.26E-02 |
| 173 | GO:0015095: magnesium ion transmembrane transporter activity | 3.48E-02 |
| 174 | GO:0004022: alcohol dehydrogenase (NAD) activity | 3.48E-02 |
| 175 | GO:0004565: beta-galactosidase activity | 3.48E-02 |
| 176 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 3.79E-02 |
| 177 | GO:0008289: lipid binding | 4.43E-02 |
| 178 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 4.44E-02 |
| 179 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 4.44E-02 |
| 180 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 4.44E-02 |
| 181 | GO:0004407: histone deacetylase activity | 4.78E-02 |
| 182 | GO:0004364: glutathione transferase activity | 4.85E-02 |
| 183 | GO:0016787: hydrolase activity | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009571: proplastid stroma | 0.00E+00 |
| 2 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 0.00E+00 |
| 3 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 4 | GO:0009507: chloroplast | 3.81E-132 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 1.38E-68 |
| 6 | GO:0009570: chloroplast stroma | 4.10E-64 |
| 7 | GO:0009941: chloroplast envelope | 7.26E-64 |
| 8 | GO:0009579: thylakoid | 5.71E-38 |
| 9 | GO:0009534: chloroplast thylakoid | 6.33E-34 |
| 10 | GO:0009543: chloroplast thylakoid lumen | 8.55E-28 |
| 11 | GO:0031977: thylakoid lumen | 3.02E-18 |
| 12 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.42E-13 |
| 13 | GO:0009654: photosystem II oxygen evolving complex | 1.39E-10 |
| 14 | GO:0031969: chloroplast membrane | 2.62E-10 |
| 15 | GO:0005840: ribosome | 5.19E-10 |
| 16 | GO:0019898: extrinsic component of membrane | 1.15E-07 |
| 17 | GO:0009523: photosystem II | 1.15E-07 |
| 18 | GO:0010287: plastoglobule | 1.41E-07 |
| 19 | GO:0042651: thylakoid membrane | 2.26E-07 |
| 20 | GO:0048046: apoplast | 9.14E-07 |
| 21 | GO:0010319: stromule | 6.96E-06 |
| 22 | GO:0009536: plastid | 8.93E-06 |
| 23 | GO:0030095: chloroplast photosystem II | 4.50E-05 |
| 24 | GO:0009533: chloroplast stromal thylakoid | 6.40E-05 |
| 25 | GO:0016020: membrane | 2.12E-04 |
| 26 | GO:0009706: chloroplast inner membrane | 3.63E-04 |
| 27 | GO:0000311: plastid large ribosomal subunit | 3.97E-04 |
| 28 | GO:0055035: plastid thylakoid membrane | 4.64E-04 |
| 29 | GO:0009547: plastid ribosome | 8.29E-04 |
| 30 | GO:0009515: granal stacked thylakoid | 8.29E-04 |
| 31 | GO:0009782: photosystem I antenna complex | 8.29E-04 |
| 32 | GO:0009344: nitrite reductase complex [NAD(P)H] | 8.29E-04 |
| 33 | GO:0016021: integral component of membrane | 8.92E-04 |
| 34 | GO:0009532: plastid stroma | 1.08E-03 |
| 35 | GO:0015934: large ribosomal subunit | 1.42E-03 |
| 36 | GO:0080085: signal recognition particle, chloroplast targeting | 1.80E-03 |
| 37 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 1.80E-03 |
| 38 | GO:0030981: cortical microtubule cytoskeleton | 1.80E-03 |
| 39 | GO:0046658: anchored component of plasma membrane | 1.94E-03 |
| 40 | GO:0045298: tubulin complex | 1.98E-03 |
| 41 | GO:0009528: plastid inner membrane | 2.98E-03 |
| 42 | GO:0010007: magnesium chelatase complex | 2.98E-03 |
| 43 | GO:0009508: plastid chromosome | 4.15E-03 |
| 44 | GO:0030529: intracellular ribonucleoprotein complex | 4.33E-03 |
| 45 | GO:0015630: microtubule cytoskeleton | 4.34E-03 |
| 46 | GO:0005960: glycine cleavage complex | 4.34E-03 |
| 47 | GO:0000312: plastid small ribosomal subunit | 4.70E-03 |
| 48 | GO:0030076: light-harvesting complex | 5.27E-03 |
| 49 | GO:0009527: plastid outer membrane | 5.87E-03 |
| 50 | GO:0009526: plastid envelope | 5.87E-03 |
| 51 | GO:0009517: PSII associated light-harvesting complex II | 5.87E-03 |
| 52 | GO:0009512: cytochrome b6f complex | 7.55E-03 |
| 53 | GO:0022626: cytosolic ribosome | 9.11E-03 |
| 54 | GO:0031209: SCAR complex | 9.39E-03 |
| 55 | GO:0005759: mitochondrial matrix | 1.32E-02 |
| 56 | GO:0031359: integral component of chloroplast outer membrane | 1.35E-02 |
| 57 | GO:0009501: amyloplast | 1.58E-02 |
| 58 | GO:0009539: photosystem II reaction center | 1.81E-02 |
| 59 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 1.81E-02 |
| 60 | GO:0005763: mitochondrial small ribosomal subunit | 2.06E-02 |
| 61 | GO:0009295: nucleoid | 2.11E-02 |
| 62 | GO:0016324: apical plasma membrane | 2.60E-02 |
| 63 | GO:0009707: chloroplast outer membrane | 3.10E-02 |
| 64 | GO:0005618: cell wall | 3.10E-02 |
| 65 | GO:0005874: microtubule | 3.81E-02 |
| 66 | GO:0043234: protein complex | 4.44E-02 |