Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G12220

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071327: cellular response to trehalose stimulus0.00E+00
2GO:1900367: positive regulation of defense response to insect0.00E+00
3GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.35E-08
4GO:0009816: defense response to bacterium, incompatible interaction9.19E-07
5GO:0009627: systemic acquired resistance1.01E-06
6GO:0051707: response to other organism3.21E-06
7GO:1901183: positive regulation of camalexin biosynthetic process1.21E-05
8GO:0046244: salicylic acid catabolic process1.21E-05
9GO:2000022: regulation of jasmonic acid mediated signaling pathway2.22E-05
10GO:0031348: negative regulation of defense response2.22E-05
11GO:0080185: effector dependent induction by symbiont of host immune response3.21E-05
12GO:0010618: aerenchyma formation3.21E-05
13GO:0031349: positive regulation of defense response3.21E-05
14GO:0055074: calcium ion homeostasis5.78E-05
15GO:0015696: ammonium transport8.79E-05
16GO:0002239: response to oomycetes8.79E-05
17GO:0009751: response to salicylic acid1.16E-04
18GO:0080142: regulation of salicylic acid biosynthetic process1.22E-04
19GO:0072488: ammonium transmembrane transport1.22E-04
20GO:0009697: salicylic acid biosynthetic process1.59E-04
21GO:0046283: anthocyanin-containing compound metabolic process1.59E-04
22GO:0010225: response to UV-C1.59E-04
23GO:0010942: positive regulation of cell death1.98E-04
24GO:0009737: response to abscisic acid2.22E-04
25GO:0010224: response to UV-B2.34E-04
26GO:0010310: regulation of hydrogen peroxide metabolic process2.39E-04
27GO:0009626: plant-type hypersensitive response2.86E-04
28GO:0006468: protein phosphorylation2.88E-04
29GO:0009624: response to nematode3.24E-04
30GO:0031540: regulation of anthocyanin biosynthetic process3.27E-04
31GO:0009787: regulation of abscisic acid-activated signaling pathway3.27E-04
32GO:0030162: regulation of proteolysis3.27E-04
33GO:0010204: defense response signaling pathway, resistance gene-independent3.73E-04
34GO:0043562: cellular response to nitrogen levels3.73E-04
35GO:2000031: regulation of salicylic acid mediated signaling pathway3.73E-04
36GO:1900426: positive regulation of defense response to bacterium4.69E-04
37GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway4.69E-04
38GO:0010150: leaf senescence5.51E-04
39GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process6.14E-04
40GO:0010105: negative regulation of ethylene-activated signaling pathway6.23E-04
41GO:0006790: sulfur compound metabolic process6.23E-04
42GO:0002213: defense response to insect6.23E-04
43GO:0042742: defense response to bacterium6.45E-04
44GO:0009617: response to bacterium6.54E-04
45GO:0007034: vacuolar transport7.31E-04
46GO:0046854: phosphatidylinositol phosphorylation7.88E-04
47GO:0010200: response to chitin1.06E-03
48GO:0009814: defense response, incompatible interaction1.08E-03
49GO:0019748: secondary metabolic process1.08E-03
50GO:0009625: response to insect1.14E-03
51GO:0000302: response to reactive oxygen species1.61E-03
52GO:0006891: intra-Golgi vesicle-mediated transport1.61E-03
53GO:0002229: defense response to oomycetes1.61E-03
54GO:0001666: response to hypoxia2.06E-03
55GO:0009615: response to virus2.06E-03
56GO:0016311: dephosphorylation2.38E-03
57GO:0009817: defense response to fungus, incompatible interaction2.46E-03
58GO:0048527: lateral root development2.71E-03
59GO:0035556: intracellular signal transduction2.74E-03
60GO:0045087: innate immune response2.89E-03
61GO:0006457: protein folding3.35E-03
62GO:0006855: drug transmembrane transport3.80E-03
63GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process3.90E-03
64GO:0009620: response to fungus5.02E-03
65GO:0018105: peptidyl-serine phosphorylation5.45E-03
66GO:0006952: defense response5.49E-03
67GO:0010468: regulation of gene expression8.82E-03
68GO:0007165: signal transduction1.09E-02
69GO:0009860: pollen tube growth1.11E-02
70GO:0016192: vesicle-mediated transport1.28E-02
71GO:0046777: protein autophosphorylation1.29E-02
72GO:0006886: intracellular protein transport1.43E-02
73GO:0016042: lipid catabolic process1.59E-02
74GO:0006629: lipid metabolic process1.62E-02
75GO:0009408: response to heat1.62E-02
76GO:0009873: ethylene-activated signaling pathway1.95E-02
77GO:0009738: abscisic acid-activated signaling pathway2.38E-02
78GO:0009414: response to water deprivation3.97E-02
79GO:0015031: protein transport4.79E-02
RankGO TermAdjusted P value
1GO:0016312: inositol bisphosphate phosphatase activity0.00E+00
2GO:0010857: calcium-dependent protein kinase activity0.00E+00
3GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity1.21E-05
4GO:1901149: salicylic acid binding1.21E-05
5GO:0016301: kinase activity3.14E-05
6GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity5.78E-05
7GO:0035529: NADH pyrophosphatase activity8.79E-05
8GO:0004674: protein serine/threonine kinase activity1.18E-04
9GO:0047631: ADP-ribose diphosphatase activity1.59E-04
10GO:0000210: NAD+ diphosphatase activity1.98E-04
11GO:0008519: ammonium transmembrane transporter activity1.98E-04
12GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.39E-04
13GO:0015095: magnesium ion transmembrane transporter activity6.76E-04
14GO:0004707: MAP kinase activity1.02E-03
15GO:0005524: ATP binding1.62E-03
16GO:0051213: dioxygenase activity2.06E-03
17GO:0009931: calcium-dependent protein serine/threonine kinase activity2.22E-03
18GO:0004683: calmodulin-dependent protein kinase activity2.30E-03
19GO:0004806: triglyceride lipase activity2.30E-03
20GO:0015238: drug transmembrane transporter activity2.55E-03
21GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2.89E-03
22GO:0000987: core promoter proximal region sequence-specific DNA binding2.97E-03
23GO:0005515: protein binding3.07E-03
24GO:0051287: NAD binding3.90E-03
25GO:0016298: lipase activity4.30E-03
26GO:0031625: ubiquitin protein ligase binding4.50E-03
27GO:0005509: calcium ion binding4.81E-03
28GO:0051082: unfolded protein binding5.34E-03
29GO:0008565: protein transporter activity7.06E-03
30GO:0015297: antiporter activity7.55E-03
31GO:0004672: protein kinase activity7.65E-03
32GO:0061630: ubiquitin protein ligase activity1.28E-02
33GO:0016740: transferase activity2.81E-02
34GO:0030246: carbohydrate binding3.02E-02
35GO:0005516: calmodulin binding3.27E-02
36GO:0044212: transcription regulatory region DNA binding4.04E-02
37GO:0005215: transporter activity4.34E-02
RankGO TermAdjusted P value
1GO:0005901: caveola3.21E-05
2GO:0005788: endoplasmic reticulum lumen7.63E-05
3GO:0005795: Golgi stack7.88E-04
4GO:0005769: early endosome8.44E-04
5GO:0016592: mediator complex1.68E-03
6GO:0005778: peroxisomal membrane1.91E-03
7GO:0019005: SCF ubiquitin ligase complex2.46E-03
8GO:0005886: plasma membrane8.05E-03
9GO:0031969: chloroplast membrane1.23E-02
10GO:0005777: peroxisome2.69E-02
11GO:0005622: intracellular3.68E-02
12GO:0009536: plastid4.67E-02
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Gene type



Gene DE type