GO Enrichment Analysis of Co-expressed Genes with
AT3G10940
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 2 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 3 | GO:0009773: photosynthetic electron transport in photosystem I | 4.47E-08 |
| 4 | GO:0010027: thylakoid membrane organization | 1.07E-07 |
| 5 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 7.96E-07 |
| 6 | GO:0000373: Group II intron splicing | 1.90E-06 |
| 7 | GO:0015979: photosynthesis | 1.01E-05 |
| 8 | GO:0015994: chlorophyll metabolic process | 1.33E-05 |
| 9 | GO:0010021: amylopectin biosynthetic process | 1.33E-05 |
| 10 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 3.28E-05 |
| 11 | GO:0010196: nonphotochemical quenching | 6.22E-05 |
| 12 | GO:0019252: starch biosynthetic process | 6.22E-05 |
| 13 | GO:0043953: protein transport by the Tat complex | 1.25E-04 |
| 14 | GO:0051775: response to redox state | 1.25E-04 |
| 15 | GO:0010206: photosystem II repair | 1.25E-04 |
| 16 | GO:1904966: positive regulation of vitamin E biosynthetic process | 1.25E-04 |
| 17 | GO:1904964: positive regulation of phytol biosynthetic process | 1.25E-04 |
| 18 | GO:0080051: cutin transport | 1.25E-04 |
| 19 | GO:0065002: intracellular protein transmembrane transport | 1.25E-04 |
| 20 | GO:0010205: photoinhibition | 1.51E-04 |
| 21 | GO:0009915: phloem sucrose loading | 2.90E-04 |
| 22 | GO:0015908: fatty acid transport | 2.90E-04 |
| 23 | GO:0080005: photosystem stoichiometry adjustment | 2.90E-04 |
| 24 | GO:1904143: positive regulation of carotenoid biosynthetic process | 2.90E-04 |
| 25 | GO:0016122: xanthophyll metabolic process | 2.90E-04 |
| 26 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 2.90E-04 |
| 27 | GO:0010020: chloroplast fission | 3.14E-04 |
| 28 | GO:0006000: fructose metabolic process | 4.78E-04 |
| 29 | GO:0051604: protein maturation | 4.78E-04 |
| 30 | GO:0016050: vesicle organization | 4.78E-04 |
| 31 | GO:0009152: purine ribonucleotide biosynthetic process | 6.85E-04 |
| 32 | GO:0046653: tetrahydrofolate metabolic process | 6.85E-04 |
| 33 | GO:0006107: oxaloacetate metabolic process | 6.85E-04 |
| 34 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 6.85E-04 |
| 35 | GO:0006020: inositol metabolic process | 6.85E-04 |
| 36 | GO:0009765: photosynthesis, light harvesting | 9.08E-04 |
| 37 | GO:0006109: regulation of carbohydrate metabolic process | 9.08E-04 |
| 38 | GO:0045727: positive regulation of translation | 9.08E-04 |
| 39 | GO:0006021: inositol biosynthetic process | 9.08E-04 |
| 40 | GO:0006734: NADH metabolic process | 9.08E-04 |
| 41 | GO:0010222: stem vascular tissue pattern formation | 9.08E-04 |
| 42 | GO:0009247: glycolipid biosynthetic process | 1.15E-03 |
| 43 | GO:0046855: inositol phosphate dephosphorylation | 1.41E-03 |
| 44 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.41E-03 |
| 45 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.41E-03 |
| 46 | GO:1901259: chloroplast rRNA processing | 1.68E-03 |
| 47 | GO:0010189: vitamin E biosynthetic process | 1.68E-03 |
| 48 | GO:0018298: protein-chromophore linkage | 1.93E-03 |
| 49 | GO:0009772: photosynthetic electron transport in photosystem II | 1.98E-03 |
| 50 | GO:0009645: response to low light intensity stimulus | 1.98E-03 |
| 51 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 1.98E-03 |
| 52 | GO:0009395: phospholipid catabolic process | 1.98E-03 |
| 53 | GO:0009735: response to cytokinin | 2.24E-03 |
| 54 | GO:0048564: photosystem I assembly | 2.29E-03 |
| 55 | GO:0005978: glycogen biosynthetic process | 2.29E-03 |
| 56 | GO:0009642: response to light intensity | 2.29E-03 |
| 57 | GO:0030091: protein repair | 2.29E-03 |
| 58 | GO:0019375: galactolipid biosynthetic process | 2.29E-03 |
| 59 | GO:0009704: de-etiolation | 2.29E-03 |
| 60 | GO:0016559: peroxisome fission | 2.29E-03 |
| 61 | GO:0006002: fructose 6-phosphate metabolic process | 2.61E-03 |
| 62 | GO:0007186: G-protein coupled receptor signaling pathway | 2.61E-03 |
| 63 | GO:0032544: plastid translation | 2.61E-03 |
| 64 | GO:0009658: chloroplast organization | 2.67E-03 |
| 65 | GO:0055114: oxidation-reduction process | 2.93E-03 |
| 66 | GO:0034765: regulation of ion transmembrane transport | 2.95E-03 |
| 67 | GO:0006754: ATP biosynthetic process | 2.95E-03 |
| 68 | GO:0005982: starch metabolic process | 3.31E-03 |
| 69 | GO:0009644: response to high light intensity | 3.37E-03 |
| 70 | GO:0006508: proteolysis | 4.02E-03 |
| 71 | GO:0043085: positive regulation of catalytic activity | 4.06E-03 |
| 72 | GO:0006790: sulfur compound metabolic process | 4.45E-03 |
| 73 | GO:0005986: sucrose biosynthetic process | 4.86E-03 |
| 74 | GO:0010588: cotyledon vascular tissue pattern formation | 4.86E-03 |
| 75 | GO:0006108: malate metabolic process | 4.86E-03 |
| 76 | GO:0006094: gluconeogenesis | 4.86E-03 |
| 77 | GO:0009767: photosynthetic electron transport chain | 4.86E-03 |
| 78 | GO:0019253: reductive pentose-phosphate cycle | 5.28E-03 |
| 79 | GO:0009266: response to temperature stimulus | 5.28E-03 |
| 80 | GO:0005985: sucrose metabolic process | 5.71E-03 |
| 81 | GO:0046854: phosphatidylinositol phosphorylation | 5.71E-03 |
| 82 | GO:0019762: glucosinolate catabolic process | 6.15E-03 |
| 83 | GO:0008299: isoprenoid biosynthetic process | 7.08E-03 |
| 84 | GO:0006874: cellular calcium ion homeostasis | 7.08E-03 |
| 85 | GO:0007017: microtubule-based process | 7.08E-03 |
| 86 | GO:0009768: photosynthesis, light harvesting in photosystem I | 7.08E-03 |
| 87 | GO:0009269: response to desiccation | 7.56E-03 |
| 88 | GO:0016226: iron-sulfur cluster assembly | 8.05E-03 |
| 89 | GO:0042391: regulation of membrane potential | 1.01E-02 |
| 90 | GO:0006662: glycerol ether metabolic process | 1.07E-02 |
| 91 | GO:0009741: response to brassinosteroid | 1.07E-02 |
| 92 | GO:0048544: recognition of pollen | 1.12E-02 |
| 93 | GO:0015986: ATP synthesis coupled proton transport | 1.12E-02 |
| 94 | GO:0006814: sodium ion transport | 1.12E-02 |
| 95 | GO:0009646: response to absence of light | 1.12E-02 |
| 96 | GO:0009409: response to cold | 1.19E-02 |
| 97 | GO:0009416: response to light stimulus | 1.19E-02 |
| 98 | GO:0009611: response to wounding | 1.23E-02 |
| 99 | GO:0019761: glucosinolate biosynthetic process | 1.30E-02 |
| 100 | GO:0032502: developmental process | 1.30E-02 |
| 101 | GO:0030163: protein catabolic process | 1.36E-02 |
| 102 | GO:0009567: double fertilization forming a zygote and endosperm | 1.42E-02 |
| 103 | GO:0071805: potassium ion transmembrane transport | 1.48E-02 |
| 104 | GO:0016126: sterol biosynthetic process | 1.61E-02 |
| 105 | GO:0015995: chlorophyll biosynthetic process | 1.81E-02 |
| 106 | GO:0080167: response to karrikin | 1.99E-02 |
| 107 | GO:0006811: ion transport | 2.08E-02 |
| 108 | GO:0009853: photorespiration | 2.30E-02 |
| 109 | GO:0034599: cellular response to oxidative stress | 2.37E-02 |
| 110 | GO:0006099: tricarboxylic acid cycle | 2.37E-02 |
| 111 | GO:0006631: fatty acid metabolic process | 2.60E-02 |
| 112 | GO:0006869: lipid transport | 2.61E-02 |
| 113 | GO:0032259: methylation | 2.81E-02 |
| 114 | GO:0042742: defense response to bacterium | 2.90E-02 |
| 115 | GO:0006979: response to oxidative stress | 2.93E-02 |
| 116 | GO:0006629: lipid metabolic process | 2.93E-02 |
| 117 | GO:0006855: drug transmembrane transport | 3.07E-02 |
| 118 | GO:0031347: regulation of defense response | 3.15E-02 |
| 119 | GO:0009809: lignin biosynthetic process | 3.40E-02 |
| 120 | GO:0006364: rRNA processing | 3.40E-02 |
| 121 | GO:0006417: regulation of translation | 3.66E-02 |
| 122 | GO:0006096: glycolytic process | 3.83E-02 |
| 123 | GO:0043086: negative regulation of catalytic activity | 3.83E-02 |
| 124 | GO:0048316: seed development | 3.92E-02 |
| 125 | GO:0009626: plant-type hypersensitive response | 4.01E-02 |
| 126 | GO:0009651: response to salt stress | 4.52E-02 |
| 127 | GO:0009742: brassinosteroid mediated signaling pathway | 4.56E-02 |
| 128 | GO:0006810: transport | 4.66E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 2 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 3 | GO:0009976: tocopherol cyclase activity | 0.00E+00 |
| 4 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 5 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 6 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 7 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 8 | GO:0051738: xanthophyll binding | 0.00E+00 |
| 9 | GO:0004222: metalloendopeptidase activity | 1.04E-05 |
| 10 | GO:0009011: starch synthase activity | 1.33E-05 |
| 11 | GO:0004176: ATP-dependent peptidase activity | 2.23E-05 |
| 12 | GO:0008237: metallopeptidase activity | 1.01E-04 |
| 13 | GO:0009496: plastoquinol--plastocyanin reductase activity | 1.25E-04 |
| 14 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 1.25E-04 |
| 15 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 1.25E-04 |
| 16 | GO:0008746: NAD(P)+ transhydrogenase activity | 1.25E-04 |
| 17 | GO:0015245: fatty acid transporter activity | 1.25E-04 |
| 18 | GO:0035671: enone reductase activity | 1.25E-04 |
| 19 | GO:0016168: chlorophyll binding | 1.30E-04 |
| 20 | GO:0030234: enzyme regulator activity | 1.79E-04 |
| 21 | GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity | 2.90E-04 |
| 22 | GO:0052832: inositol monophosphate 3-phosphatase activity | 2.90E-04 |
| 23 | GO:0033201: alpha-1,4-glucan synthase activity | 2.90E-04 |
| 24 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 2.90E-04 |
| 25 | GO:0008805: carbon-monoxide oxygenase activity | 2.90E-04 |
| 26 | GO:0008934: inositol monophosphate 1-phosphatase activity | 2.90E-04 |
| 27 | GO:0052833: inositol monophosphate 4-phosphatase activity | 2.90E-04 |
| 28 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 2.90E-04 |
| 29 | GO:0008967: phosphoglycolate phosphatase activity | 2.90E-04 |
| 30 | GO:0047746: chlorophyllase activity | 2.90E-04 |
| 31 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 2.90E-04 |
| 32 | GO:0043169: cation binding | 4.78E-04 |
| 33 | GO:0004373: glycogen (starch) synthase activity | 4.78E-04 |
| 34 | GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | 4.78E-04 |
| 35 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 4.78E-04 |
| 36 | GO:0070402: NADPH binding | 4.78E-04 |
| 37 | GO:0008864: formyltetrahydrofolate deformylase activity | 4.78E-04 |
| 38 | GO:0022891: substrate-specific transmembrane transporter activity | 6.28E-04 |
| 39 | GO:0035250: UDP-galactosyltransferase activity | 6.85E-04 |
| 40 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 6.85E-04 |
| 41 | GO:0008508: bile acid:sodium symporter activity | 6.85E-04 |
| 42 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 9.08E-04 |
| 43 | GO:0004506: squalene monooxygenase activity | 9.08E-04 |
| 44 | GO:0043495: protein anchor | 9.08E-04 |
| 45 | GO:0004930: G-protein coupled receptor activity | 9.08E-04 |
| 46 | GO:0005319: lipid transporter activity | 9.08E-04 |
| 47 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 9.08E-04 |
| 48 | GO:0016853: isomerase activity | 9.12E-04 |
| 49 | GO:0016615: malate dehydrogenase activity | 1.41E-03 |
| 50 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.68E-03 |
| 51 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.68E-03 |
| 52 | GO:0030060: L-malate dehydrogenase activity | 1.68E-03 |
| 53 | GO:0005242: inward rectifier potassium channel activity | 1.68E-03 |
| 54 | GO:0019899: enzyme binding | 1.98E-03 |
| 55 | GO:0042802: identical protein binding | 2.08E-03 |
| 56 | GO:0046872: metal ion binding | 2.18E-03 |
| 57 | GO:0052747: sinapyl alcohol dehydrogenase activity | 2.29E-03 |
| 58 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 2.95E-03 |
| 59 | GO:0008047: enzyme activator activity | 3.68E-03 |
| 60 | GO:0047372: acylglycerol lipase activity | 4.06E-03 |
| 61 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 4.45E-03 |
| 62 | GO:0008266: poly(U) RNA binding | 5.28E-03 |
| 63 | GO:0005217: intracellular ligand-gated ion channel activity | 5.71E-03 |
| 64 | GO:0004970: ionotropic glutamate receptor activity | 5.71E-03 |
| 65 | GO:0031409: pigment binding | 6.15E-03 |
| 66 | GO:0004857: enzyme inhibitor activity | 6.61E-03 |
| 67 | GO:0051536: iron-sulfur cluster binding | 6.61E-03 |
| 68 | GO:0019843: rRNA binding | 7.46E-03 |
| 69 | GO:0047134: protein-disulfide reductase activity | 9.60E-03 |
| 70 | GO:0030551: cyclic nucleotide binding | 1.01E-02 |
| 71 | GO:0005249: voltage-gated potassium channel activity | 1.01E-02 |
| 72 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.07E-02 |
| 73 | GO:0050662: coenzyme binding | 1.12E-02 |
| 74 | GO:0004791: thioredoxin-disulfide reductase activity | 1.12E-02 |
| 75 | GO:0016491: oxidoreductase activity | 1.14E-02 |
| 76 | GO:0048038: quinone binding | 1.24E-02 |
| 77 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.36E-02 |
| 78 | GO:0008168: methyltransferase activity | 1.54E-02 |
| 79 | GO:0051213: dioxygenase activity | 1.61E-02 |
| 80 | GO:0008236: serine-type peptidase activity | 1.87E-02 |
| 81 | GO:0008233: peptidase activity | 1.95E-02 |
| 82 | GO:0015238: drug transmembrane transporter activity | 2.01E-02 |
| 83 | GO:0030145: manganese ion binding | 2.15E-02 |
| 84 | GO:0005525: GTP binding | 2.24E-02 |
| 85 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.30E-02 |
| 86 | GO:0016787: hydrolase activity | 2.35E-02 |
| 87 | GO:0003993: acid phosphatase activity | 2.37E-02 |
| 88 | GO:0042803: protein homodimerization activity | 2.49E-02 |
| 89 | GO:0043621: protein self-association | 2.91E-02 |
| 90 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.91E-02 |
| 91 | GO:0003924: GTPase activity | 2.93E-02 |
| 92 | GO:0005198: structural molecule activity | 2.99E-02 |
| 93 | GO:0003824: catalytic activity | 3.26E-02 |
| 94 | GO:0005515: protein binding | 3.60E-02 |
| 95 | GO:0003777: microtubule motor activity | 3.66E-02 |
| 96 | GO:0045735: nutrient reservoir activity | 3.83E-02 |
| 97 | GO:0016874: ligase activity | 4.19E-02 |
| 98 | GO:0015035: protein disulfide oxidoreductase activity | 4.47E-02 |
| 99 | GO:0016887: ATPase activity | 4.52E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043235: receptor complex | 0.00E+00 |
| 2 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 2.41E-35 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 5.46E-20 |
| 5 | GO:0009534: chloroplast thylakoid | 8.54E-20 |
| 6 | GO:0009941: chloroplast envelope | 6.68E-18 |
| 7 | GO:0009570: chloroplast stroma | 2.15E-16 |
| 8 | GO:0009579: thylakoid | 2.42E-11 |
| 9 | GO:0010287: plastoglobule | 3.10E-07 |
| 10 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.90E-06 |
| 11 | GO:0009706: chloroplast inner membrane | 4.78E-06 |
| 12 | GO:0009501: amyloplast | 8.08E-05 |
| 13 | GO:0009782: photosystem I antenna complex | 1.25E-04 |
| 14 | GO:0043190: ATP-binding cassette (ABC) transporter complex | 1.25E-04 |
| 15 | GO:0031361: integral component of thylakoid membrane | 1.25E-04 |
| 16 | GO:0009897: external side of plasma membrane | 4.78E-04 |
| 17 | GO:0033281: TAT protein transport complex | 4.78E-04 |
| 18 | GO:0042651: thylakoid membrane | 4.81E-04 |
| 19 | GO:0009517: PSII associated light-harvesting complex II | 9.08E-04 |
| 20 | GO:0009526: plastid envelope | 9.08E-04 |
| 21 | GO:0009544: chloroplast ATP synthase complex | 9.08E-04 |
| 22 | GO:0030286: dynein complex | 9.08E-04 |
| 23 | GO:0009523: photosystem II | 9.76E-04 |
| 24 | GO:0055035: plastid thylakoid membrane | 1.15E-03 |
| 25 | GO:0009512: cytochrome b6f complex | 1.15E-03 |
| 26 | GO:0010319: stromule | 1.32E-03 |
| 27 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 1.41E-03 |
| 28 | GO:0048046: apoplast | 1.72E-03 |
| 29 | GO:0009707: chloroplast outer membrane | 1.93E-03 |
| 30 | GO:0031977: thylakoid lumen | 2.88E-03 |
| 31 | GO:0031969: chloroplast membrane | 3.51E-03 |
| 32 | GO:0009508: plastid chromosome | 4.86E-03 |
| 33 | GO:0030076: light-harvesting complex | 5.71E-03 |
| 34 | GO:0005875: microtubule associated complex | 6.15E-03 |
| 35 | GO:0009654: photosystem II oxygen evolving complex | 7.08E-03 |
| 36 | GO:0016021: integral component of membrane | 1.10E-02 |
| 37 | GO:0019898: extrinsic component of membrane | 1.18E-02 |
| 38 | GO:0009295: nucleoid | 1.48E-02 |
| 39 | GO:0016020: membrane | 1.54E-02 |
| 40 | GO:0030529: intracellular ribonucleoprotein complex | 1.61E-02 |
| 41 | GO:0009536: plastid | 3.74E-02 |