co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G10525

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006982: response to lipid hydroperoxide	0.00E+00
2	GO:0010335: response to non-ionic osmotic stress	0.00E+00
3	GO:0015822: ornithine transport	0.00E+00
4	GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene	0.00E+00
5	GO:0036172: thiamine salvage	0.00E+00
6	GO:0019265: glycine biosynthetic process, by transamination of glyoxylate	0.00E+00
7	GO:0046471: phosphatidylglycerol metabolic process	0.00E+00
8	GO:0031022: nuclear migration along microfilament	1.53E-06
9	GO:0006094: gluconeogenesis	3.06E-06
10	GO:0042823: pyridoxal phosphate biosynthetic process	3.65E-06
11	GO:0019464: glycine decarboxylation via glycine cleavage system	6.94E-06
12	GO:0006546: glycine catabolic process	6.94E-06
13	GO:0009854: oxidative photosynthetic carbon pathway	2.53E-05
14	GO:0009903: chloroplast avoidance movement	2.53E-05
15	GO:0052543: callose deposition in cell wall	4.50E-05
16	GO:0006098: pentose-phosphate shunt	7.10E-05
17	GO:0080093: regulation of photorespiration	8.61E-05
18	GO:0000066: mitochondrial ornithine transport	8.61E-05
19	GO:0031998: regulation of fatty acid beta-oxidation	8.61E-05
20	GO:1902265: abscisic acid homeostasis	8.61E-05
21	GO:0006659: phosphatidylserine biosynthetic process	8.61E-05
22	GO:0019253: reductive pentose-phosphate cycle	1.86E-04
23	GO:0043100: pyrimidine nucleobase salvage	2.04E-04
24	GO:0030388: fructose 1,6-bisphosphate metabolic process	2.04E-04
25	GO:0010275: NAD(P)H dehydrogenase complex assembly	2.04E-04
26	GO:0042819: vitamin B6 biosynthetic process	2.04E-04
27	GO:0044375: regulation of peroxisome size	3.42E-04
28	GO:0005977: glycogen metabolic process	3.42E-04
29	GO:0006011: UDP-glucose metabolic process	3.42E-04
30	GO:0000913: preprophase band assembly	3.42E-04
31	GO:0006000: fructose metabolic process	3.42E-04
32	GO:0046417: chorismate metabolic process	3.42E-04
33	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	4.92E-04
34	GO:0006166: purine ribonucleoside salvage	4.92E-04
35	GO:0008615: pyridoxine biosynthetic process	4.92E-04
36	GO:0006168: adenine salvage	4.92E-04
37	GO:0006520: cellular amino acid metabolic process	5.23E-04
38	GO:0051781: positive regulation of cell division	6.55E-04
39	GO:0015994: chlorophyll metabolic process	6.55E-04
40	GO:0006021: inositol biosynthetic process	6.55E-04
41	GO:0009902: chloroplast relocation	6.55E-04
42	GO:0006097: glyoxylate cycle	8.29E-04
43	GO:0009229: thiamine diphosphate biosynthetic process	8.29E-04
44	GO:0044209: AMP salvage	8.29E-04
45	GO:0016120: carotene biosynthetic process	8.29E-04
46	GO:0043097: pyrimidine nucleoside salvage	8.29E-04
47	GO:0009904: chloroplast accumulation movement	8.29E-04
48	GO:0010942: positive regulation of cell death	1.01E-03
49	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	1.01E-03
50	GO:0070814: hydrogen sulfide biosynthetic process	1.01E-03
51	GO:0006206: pyrimidine nucleobase metabolic process	1.01E-03
52	GO:0009228: thiamine biosynthetic process	1.01E-03
53	GO:0009635: response to herbicide	1.01E-03
54	GO:0050665: hydrogen peroxide biosynthetic process	1.01E-03
55	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.20E-03
56	GO:0045926: negative regulation of growth	1.20E-03
57	GO:0009082: branched-chain amino acid biosynthetic process	1.20E-03
58	GO:0017148: negative regulation of translation	1.20E-03
59	GO:0009099: valine biosynthetic process	1.20E-03
60	GO:0098869: cellular oxidant detoxification	1.41E-03
61	GO:0055114: oxidation-reduction process	1.45E-03
62	GO:0009637: response to blue light	1.48E-03
63	GO:0009853: photorespiration	1.48E-03
64	GO:0016559: peroxisome fission	1.63E-03
65	GO:0048564: photosystem I assembly	1.63E-03
66	GO:0009787: regulation of abscisic acid-activated signaling pathway	1.63E-03
67	GO:0009850: auxin metabolic process	1.63E-03
68	GO:0080167: response to karrikin	1.84E-03
69	GO:0006002: fructose 6-phosphate metabolic process	1.86E-03
70	GO:0071482: cellular response to light stimulus	1.86E-03
71	GO:0009097: isoleucine biosynthetic process	1.86E-03
72	GO:0009056: catabolic process	2.10E-03
73	GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	2.35E-03
74	GO:0010192: mucilage biosynthetic process	2.61E-03
75	GO:0051555: flavonol biosynthetic process	2.61E-03
76	GO:0009970: cellular response to sulfate starvation	2.61E-03
77	GO:0000103: sulfate assimilation	2.61E-03
78	GO:0018119: peptidyl-cysteine S-nitrosylation	2.87E-03
79	GO:0009073: aromatic amino acid family biosynthetic process	2.87E-03
80	GO:0006096: glycolytic process	2.99E-03
81	GO:0071365: cellular response to auxin stimulus	3.15E-03
82	GO:0005986: sucrose biosynthetic process	3.43E-03
83	GO:0030048: actin filament-based movement	3.43E-03
84	GO:0006108: malate metabolic process	3.43E-03
85	GO:0007031: peroxisome organization	4.03E-03
86	GO:0042343: indole glucosinolate metabolic process	4.03E-03
87	GO:0009833: plant-type primary cell wall biogenesis	4.34E-03
88	GO:0006833: water transport	4.34E-03
89	GO:0006636: unsaturated fatty acid biosynthetic process	4.34E-03
90	GO:0098542: defense response to other organism	5.32E-03
91	GO:0080092: regulation of pollen tube growth	5.66E-03
92	GO:0006730: one-carbon metabolic process	5.66E-03
93	GO:0016226: iron-sulfur cluster assembly	5.66E-03
94	GO:0030433: ubiquitin-dependent ERAD pathway	5.66E-03
95	GO:0006810: transport	6.15E-03
96	GO:0019722: calcium-mediated signaling	6.36E-03
97	GO:0016117: carotenoid biosynthetic process	6.73E-03
98	GO:0046686: response to cadmium ion	6.73E-03
99	GO:0042631: cellular response to water deprivation	7.10E-03
100	GO:0034220: ion transmembrane transport	7.10E-03
101	GO:0009741: response to brassinosteroid	7.48E-03
102	GO:0007018: microtubule-based movement	7.87E-03
103	GO:0007059: chromosome segregation	7.87E-03
104	GO:0009646: response to absence of light	7.87E-03
105	GO:0019252: starch biosynthetic process	8.26E-03
106	GO:0008654: phospholipid biosynthetic process	8.26E-03
107	GO:0009791: post-embryonic development	8.26E-03
108	GO:0007264: small GTPase mediated signal transduction	9.07E-03
109	GO:0010583: response to cyclopentenone	9.07E-03
110	GO:0016032: viral process	9.07E-03
111	GO:0007267: cell-cell signaling	1.03E-02
112	GO:0051607: defense response to virus	1.08E-02
113	GO:0000910: cytokinesis	1.08E-02
114	GO:0010029: regulation of seed germination	1.17E-02
115	GO:0030244: cellulose biosynthetic process	1.35E-02
116	GO:0010311: lateral root formation	1.40E-02
117	GO:0009832: plant-type cell wall biogenesis	1.40E-02
118	GO:0042742: defense response to bacterium	1.52E-02
119	GO:0016051: carbohydrate biosynthetic process	1.60E-02
120	GO:0006099: tricarboxylic acid cycle	1.65E-02
121	GO:0006839: mitochondrial transport	1.76E-02
122	GO:0008152: metabolic process	1.94E-02
123	GO:0000209: protein polyubiquitination	1.97E-02
124	GO:0042538: hyperosmotic salinity response	2.25E-02
125	GO:0009585: red, far-red light phototransduction	2.37E-02
126	GO:0010224: response to UV-B	2.43E-02
127	GO:0009735: response to cytokinin	2.85E-02
128	GO:0051726: regulation of cell cycle	3.17E-02
129	GO:0009742: brassinosteroid mediated signaling pathway	3.17E-02
130	GO:0051301: cell division	3.40E-02
131	GO:0009058: biosynthetic process	3.71E-02
132	GO:0016310: phosphorylation	4.66E-02

Rank	GO Term	Adjusted P value
1	GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity	0.00E+00
2	GO:0008465: glycerate dehydrogenase activity	0.00E+00
3	GO:0004417: hydroxyethylthiazole kinase activity	0.00E+00
4	GO:0050281: serine-glyoxylate transaminase activity	0.00E+00
5	GO:0016719: carotene 7,8-desaturase activity	0.00E+00
6	GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity	0.00E+00
7	GO:0015205: nucleobase transmembrane transporter activity	0.00E+00
8	GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity	0.00E+00
9	GO:0004760: serine-pyruvate transaminase activity	0.00E+00
10	GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity	0.00E+00
11	GO:0036361: racemase activity, acting on amino acids and derivatives	0.00E+00
12	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
13	GO:0008974: phosphoribulokinase activity	0.00E+00
14	GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives	0.00E+00
15	GO:0004375: glycine dehydrogenase (decarboxylating) activity	3.65E-06
16	GO:0004332: fructose-bisphosphate aldolase activity	1.77E-05
17	GO:0010313: phytochrome binding	8.61E-05
18	GO:0052638: indole-3-butyrate beta-glucosyltransferase activity	8.61E-05
19	GO:0003984: acetolactate synthase activity	8.61E-05
20	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	2.04E-04
21	GO:0000064: L-ornithine transmembrane transporter activity	2.04E-04
22	GO:0004512: inositol-3-phosphate synthase activity	2.04E-04
23	GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity	2.04E-04
24	GO:0004106: chorismate mutase activity	2.04E-04
25	GO:0004781: sulfate adenylyltransferase (ATP) activity	3.42E-04
26	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	3.42E-04
27	GO:0032947: protein complex scaffold	3.42E-04
28	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	4.92E-04
29	GO:0001872: (1->3)-beta-D-glucan binding	4.92E-04
30	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	4.92E-04
31	GO:0048027: mRNA 5'-UTR binding	4.92E-04
32	GO:0003999: adenine phosphoribosyltransferase activity	4.92E-04
33	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	4.92E-04
34	GO:0008080: N-acetyltransferase activity	5.23E-04
35	GO:0048038: quinone binding	6.42E-04
36	GO:0008891: glycolate oxidase activity	6.55E-04
37	GO:0004737: pyruvate decarboxylase activity	6.55E-04
38	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	6.55E-04
39	GO:0008453: alanine-glyoxylate transaminase activity	6.55E-04
40	GO:0008194: UDP-glycosyltransferase activity	9.41E-04
41	GO:0016615: malate dehydrogenase activity	1.01E-03
42	GO:0030976: thiamine pyrophosphate binding	1.01E-03
43	GO:0042578: phosphoric ester hydrolase activity	1.01E-03
44	GO:0000210: NAD+ diphosphatase activity	1.01E-03
45	GO:0016688: L-ascorbate peroxidase activity	1.01E-03
46	GO:0030060: L-malate dehydrogenase activity	1.20E-03
47	GO:0004849: uridine kinase activity	1.20E-03
48	GO:0016787: hydrolase activity	2.83E-03
49	GO:0005089: Rho guanyl-nucleotide exchange factor activity	2.87E-03
50	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.28E-03
51	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.28E-03
52	GO:0004089: carbonate dehydratase activity	3.43E-03
53	GO:0008266: poly(U) RNA binding	3.73E-03
54	GO:0016758: transferase activity, transferring hexosyl groups	4.37E-03
55	GO:0051536: iron-sulfur cluster binding	4.65E-03
56	GO:0016760: cellulose synthase (UDP-forming) activity	6.01E-03
57	GO:0042802: identical protein binding	7.85E-03
58	GO:0010181: FMN binding	7.87E-03
59	GO:0019901: protein kinase binding	8.26E-03
60	GO:0004518: nuclease activity	9.07E-03
61	GO:0046982: protein heterodimerization activity	9.38E-03
62	GO:0016759: cellulose synthase activity	9.91E-03
63	GO:0015250: water channel activity	1.12E-02
64	GO:0030247: polysaccharide binding	1.26E-02
65	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.45E-02
66	GO:0004871: signal transducer activity	1.49E-02
67	GO:0005198: structural molecule activity	2.08E-02
68	GO:0016757: transferase activity, transferring glycosyl groups	2.18E-02
69	GO:0051287: NAD binding	2.19E-02
70	GO:0003777: microtubule motor activity	2.55E-02
71	GO:0031625: ubiquitin protein ligase binding	2.55E-02
72	GO:0015035: protein disulfide oxidoreductase activity	3.11E-02
73	GO:0008017: microtubule binding	4.64E-02

Rank	GO Term	Adjusted P value
1	GO:0042579: microbody	0.00E+00
2	GO:0009507: chloroplast	1.34E-15
3	GO:0009570: chloroplast stroma	9.55E-09
4	GO:0048046: apoplast	3.42E-07
5	GO:0009941: chloroplast envelope	1.19E-06
6	GO:0005960: glycine cleavage complex	3.65E-06
7	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	7.10E-05
8	GO:0005777: peroxisome	2.68E-04
9	GO:0009509: chromoplast	3.42E-04
10	GO:0009526: plastid envelope	6.55E-04
11	GO:0009579: thylakoid	1.54E-03
12	GO:0005819: spindle	1.61E-03
13	GO:0005779: integral component of peroxisomal membrane	1.86E-03
14	GO:0005765: lysosomal membrane	2.87E-03
15	GO:0009535: chloroplast thylakoid membrane	3.05E-03
16	GO:0019013: viral nucleocapsid	3.43E-03
17	GO:0005829: cytosol	4.19E-03
18	GO:0010287: plastoglobule	4.25E-03
19	GO:0005623: cell	4.61E-03
20	GO:0005871: kinesin complex	6.73E-03
21	GO:0009504: cell plate	8.26E-03
22	GO:0005694: chromosome	9.07E-03
23	GO:0005778: peroxisomal membrane	1.03E-02
24	GO:0010319: stromule	1.03E-02
25	GO:0031969: chloroplast membrane	1.19E-02
26	GO:0019005: SCF ubiquitin ligase complex	1.35E-02
27	GO:0009707: chloroplast outer membrane	1.35E-02
28	GO:0031902: late endosome membrane	1.81E-02
29	GO:0031977: thylakoid lumen	1.81E-02
30	GO:0043231: intracellular membrane-bounded organelle	1.94E-02
31	GO:0009536: plastid	1.97E-02
32	GO:0005834: heterotrimeric G-protein complex	2.79E-02
33	GO:0012505: endomembrane system	2.98E-02
34	GO:0009543: chloroplast thylakoid lumen	3.57E-02
35	GO:0009524: phragmoplast	3.71E-02
36	GO:0009534: chloroplast thylakoid	3.76E-02