co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G10060

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1904964: positive regulation of phytol biosynthetic process	0.00E+00
2	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
3	GO:0006399: tRNA metabolic process	0.00E+00
4	GO:0034337: RNA folding	0.00E+00
5	GO:0006429: leucyl-tRNA aminoacylation	0.00E+00
6	GO:0002184: cytoplasmic translational termination	0.00E+00
7	GO:0045014: negative regulation of transcription by glucose	0.00E+00
8	GO:0016553: base conversion or substitution editing	0.00E+00
9	GO:0090627: plant epidermal cell differentiation	0.00E+00
10	GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate	0.00E+00
11	GO:0006780: uroporphyrinogen III biosynthetic process	0.00E+00
12	GO:0090071: negative regulation of ribosome biogenesis	0.00E+00
13	GO:0099131: ATP hydrolysis coupled ion transmembrane transport	0.00E+00
14	GO:1904966: positive regulation of vitamin E biosynthetic process	0.00E+00
15	GO:0061635: regulation of protein complex stability	0.00E+00
16	GO:0015979: photosynthesis	1.44E-17
17	GO:0015995: chlorophyll biosynthetic process	2.34E-10
18	GO:0009773: photosynthetic electron transport in photosystem I	2.21E-09
19	GO:0010027: thylakoid membrane organization	3.37E-09
20	GO:0006412: translation	9.19E-09
21	GO:0010207: photosystem II assembly	9.32E-09
22	GO:0032544: plastid translation	1.78E-08
23	GO:0042254: ribosome biogenesis	5.74E-08
24	GO:0090391: granum assembly	1.91E-07
25	GO:0009735: response to cytokinin	1.65E-06
26	GO:1902326: positive regulation of chlorophyll biosynthetic process	1.49E-05
27	GO:0009772: photosynthetic electron transport in photosystem II	2.79E-05
28	GO:0010196: nonphotochemical quenching	2.79E-05
29	GO:0010206: photosystem II repair	7.74E-05
30	GO:0009306: protein secretion	7.88E-05
31	GO:0010205: photoinhibition	1.01E-04
32	GO:0080170: hydrogen peroxide transmembrane transport	1.05E-04
33	GO:0015994: chlorophyll metabolic process	1.80E-04
34	GO:0016024: CDP-diacylglycerol biosynthetic process	1.95E-04
35	GO:0045038: protein import into chloroplast thylakoid membrane	2.73E-04
36	GO:0042549: photosystem II stabilization	3.83E-04
37	GO:0006655: phosphatidylglycerol biosynthetic process	3.83E-04
38	GO:1901259: chloroplast rRNA processing	5.09E-04
39	GO:0018298: protein-chromophore linkage	5.10E-04
40	GO:0010480: microsporocyte differentiation	5.87E-04
41	GO:0043953: protein transport by the Tat complex	5.87E-04
42	GO:0000481: maturation of 5S rRNA	5.87E-04
43	GO:0042759: long-chain fatty acid biosynthetic process	5.87E-04
44	GO:0042371: vitamin K biosynthetic process	5.87E-04
45	GO:0065002: intracellular protein transmembrane transport	5.87E-04
46	GO:0006106: fumarate metabolic process	5.87E-04
47	GO:0043686: co-translational protein modification	5.87E-04
48	GO:1902458: positive regulation of stomatal opening	5.87E-04
49	GO:0010028: xanthophyll cycle	5.87E-04
50	GO:0071588: hydrogen peroxide mediated signaling pathway	5.87E-04
51	GO:0043489: RNA stabilization	5.87E-04
52	GO:0008610: lipid biosynthetic process	8.10E-04
53	GO:0009658: chloroplast organization	9.24E-04
54	GO:0034220: ion transmembrane transport	9.57E-04
55	GO:0000413: protein peptidyl-prolyl isomerization	9.57E-04
56	GO:0034755: iron ion transmembrane transport	1.26E-03
57	GO:0016122: xanthophyll metabolic process	1.26E-03
58	GO:0006729: tetrahydrobiopterin biosynthetic process	1.26E-03
59	GO:1903426: regulation of reactive oxygen species biosynthetic process	1.26E-03
60	GO:0006568: tryptophan metabolic process	1.26E-03
61	GO:0030388: fructose 1,6-bisphosphate metabolic process	1.26E-03
62	GO:0010289: homogalacturonan biosynthetic process	1.26E-03
63	GO:0010275: NAD(P)H dehydrogenase complex assembly	1.26E-03
64	GO:0035304: regulation of protein dephosphorylation	1.26E-03
65	GO:0043255: regulation of carbohydrate biosynthetic process	1.26E-03
66	GO:1900871: chloroplast mRNA modification	1.26E-03
67	GO:0010541: acropetal auxin transport	1.26E-03
68	GO:0018026: peptidyl-lysine monomethylation	1.26E-03
69	GO:0006779: porphyrin-containing compound biosynthetic process	1.39E-03
70	GO:0006782: protoporphyrinogen IX biosynthetic process	1.62E-03
71	GO:0009409: response to cold	1.67E-03
72	GO:0055085: transmembrane transport	1.80E-03
73	GO:0051604: protein maturation	2.07E-03
74	GO:0010160: formation of animal organ boundary	2.07E-03
75	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	2.07E-03
76	GO:1902448: positive regulation of shade avoidance	2.07E-03
77	GO:0006518: peptide metabolic process	2.07E-03
78	GO:0006000: fructose metabolic process	2.07E-03
79	GO:0006006: glucose metabolic process	2.45E-03
80	GO:0019253: reductive pentose-phosphate cycle	2.77E-03
81	GO:0055070: copper ion homeostasis	3.01E-03
82	GO:2001141: regulation of RNA biosynthetic process	3.01E-03
83	GO:0051513: regulation of monopolar cell growth	3.01E-03
84	GO:0071484: cellular response to light intensity	3.01E-03
85	GO:0009102: biotin biosynthetic process	3.01E-03
86	GO:0051639: actin filament network formation	3.01E-03
87	GO:0009052: pentose-phosphate shunt, non-oxidative branch	3.01E-03
88	GO:0010239: chloroplast mRNA processing	3.01E-03
89	GO:1901332: negative regulation of lateral root development	3.01E-03
90	GO:0043481: anthocyanin accumulation in tissues in response to UV light	3.01E-03
91	GO:0006833: water transport	3.47E-03
92	GO:0010025: wax biosynthetic process	3.47E-03
93	GO:0009631: cold acclimation	3.73E-03
94	GO:0008152: metabolic process	3.74E-03
95	GO:0010021: amylopectin biosynthetic process	4.06E-03
96	GO:0010109: regulation of photosynthesis	4.06E-03
97	GO:0051764: actin crosslink formation	4.06E-03
98	GO:0030104: water homeostasis	4.06E-03
99	GO:0009765: photosynthesis, light harvesting	4.06E-03
100	GO:0045727: positive regulation of translation	4.06E-03
101	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	4.06E-03
102	GO:0009637: response to blue light	4.20E-03
103	GO:0034599: cellular response to oxidative stress	4.45E-03
104	GO:0016998: cell wall macromolecule catabolic process	4.68E-03
105	GO:0030001: metal ion transport	4.97E-03
106	GO:0006564: L-serine biosynthetic process	5.21E-03
107	GO:0010236: plastoquinone biosynthetic process	5.21E-03
108	GO:0016120: carotene biosynthetic process	5.21E-03
109	GO:0031365: N-terminal protein amino acid modification	5.21E-03
110	GO:0035434: copper ion transmembrane transport	5.21E-03
111	GO:0010438: cellular response to sulfur starvation	5.21E-03
112	GO:0032543: mitochondrial translation	5.21E-03
113	GO:0071369: cellular response to ethylene stimulus	5.60E-03
114	GO:0048443: stamen development	6.09E-03
115	GO:0009759: indole glucosinolate biosynthetic process	6.46E-03
116	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	6.46E-03
117	GO:0009913: epidermal cell differentiation	6.46E-03
118	GO:0000470: maturation of LSU-rRNA	6.46E-03
119	GO:0060918: auxin transport	6.46E-03
120	GO:0010337: regulation of salicylic acid metabolic process	6.46E-03
121	GO:0016554: cytidine to uridine editing	6.46E-03
122	GO:0045454: cell redox homeostasis	7.12E-03
123	GO:0009099: valine biosynthetic process	7.81E-03
124	GO:0010019: chloroplast-nucleus signaling pathway	7.81E-03
125	GO:0042372: phylloquinone biosynthetic process	7.81E-03
126	GO:0009082: branched-chain amino acid biosynthetic process	7.81E-03
127	GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	7.81E-03
128	GO:0017148: negative regulation of translation	7.81E-03
129	GO:0015986: ATP synthesis coupled proton transport	8.29E-03
130	GO:0006364: rRNA processing	8.52E-03
131	GO:0009395: phospholipid catabolic process	9.25E-03
132	GO:1900057: positive regulation of leaf senescence	9.25E-03
133	GO:0048437: floral organ development	9.25E-03
134	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	9.25E-03
135	GO:0000302: response to reactive oxygen species	9.54E-03
136	GO:0032508: DNA duplex unwinding	1.08E-02
137	GO:2000070: regulation of response to water deprivation	1.08E-02
138	GO:0006353: DNA-templated transcription, termination	1.08E-02
139	GO:0010492: maintenance of shoot apical meristem identity	1.08E-02
140	GO:0031540: regulation of anthocyanin biosynthetic process	1.08E-02
141	GO:0048564: photosystem I assembly	1.08E-02
142	GO:0006605: protein targeting	1.08E-02
143	GO:0009567: double fertilization forming a zygote and endosperm	1.16E-02
144	GO:0006002: fructose 6-phosphate metabolic process	1.24E-02
145	GO:0071482: cellular response to light stimulus	1.24E-02
146	GO:0009097: isoleucine biosynthetic process	1.24E-02
147	GO:0006754: ATP biosynthetic process	1.41E-02
148	GO:0048507: meristem development	1.41E-02
149	GO:0048589: developmental growth	1.41E-02
150	GO:0009051: pentose-phosphate shunt, oxidative branch	1.41E-02
151	GO:0009098: leucine biosynthetic process	1.59E-02
152	GO:1900865: chloroplast RNA modification	1.59E-02
153	GO:0009793: embryo development ending in seed dormancy	1.67E-02
154	GO:0006535: cysteine biosynthetic process from serine	1.77E-02
155	GO:0006032: chitin catabolic process	1.77E-02
156	GO:0018119: peptidyl-cysteine S-nitrosylation	1.96E-02
157	GO:0048229: gametophyte development	1.96E-02
158	GO:0019684: photosynthesis, light reaction	1.96E-02
159	GO:0009073: aromatic amino acid family biosynthetic process	1.96E-02
160	GO:0043085: positive regulation of catalytic activity	1.96E-02
161	GO:1903507: negative regulation of nucleic acid-templated transcription	1.96E-02
162	GO:0006879: cellular iron ion homeostasis	1.96E-02
163	GO:0006352: DNA-templated transcription, initiation	1.96E-02
164	GO:0010218: response to far red light	2.00E-02
165	GO:0042744: hydrogen peroxide catabolic process	2.10E-02
166	GO:0002213: defense response to insect	2.16E-02
167	GO:0008361: regulation of cell size	2.16E-02
168	GO:0010152: pollen maturation	2.16E-02
169	GO:0006108: malate metabolic process	2.37E-02
170	GO:0010229: inflorescence development	2.37E-02
171	GO:0009718: anthocyanin-containing compound biosynthetic process	2.37E-02
172	GO:0010075: regulation of meristem growth	2.37E-02
173	GO:0006094: gluconeogenesis	2.37E-02
174	GO:0009767: photosynthetic electron transport chain	2.37E-02
175	GO:0005986: sucrose biosynthetic process	2.37E-02
176	GO:0010628: positive regulation of gene expression	2.37E-02
177	GO:0010540: basipetal auxin transport	2.58E-02
178	GO:0009934: regulation of meristem structural organization	2.58E-02
179	GO:0048467: gynoecium development	2.58E-02
180	GO:0010143: cutin biosynthetic process	2.58E-02
181	GO:0045490: pectin catabolic process	2.68E-02
182	GO:0007623: circadian rhythm	2.68E-02
183	GO:0006869: lipid transport	2.74E-02
184	GO:0009451: RNA modification	2.76E-02
185	GO:0005985: sucrose metabolic process	2.80E-02
186	GO:0010053: root epidermal cell differentiation	2.80E-02
187	GO:0009825: multidimensional cell growth	2.80E-02
188	GO:0071732: cellular response to nitric oxide	2.80E-02
189	GO:0010167: response to nitrate	2.80E-02
190	GO:0010114: response to red light	2.97E-02
191	GO:0042023: DNA endoreduplication	3.03E-02
192	GO:0000162: tryptophan biosynthetic process	3.03E-02
193	GO:0006636: unsaturated fatty acid biosynthetic process	3.03E-02
194	GO:0006810: transport	3.19E-02
195	GO:0019344: cysteine biosynthetic process	3.26E-02
196	GO:0000027: ribosomal large subunit assembly	3.26E-02
197	GO:0051017: actin filament bundle assembly	3.26E-02
198	GO:0006508: proteolysis	3.27E-02
199	GO:0006855: drug transmembrane transport	3.47E-02
200	GO:0009695: jasmonic acid biosynthetic process	3.50E-02
201	GO:0006418: tRNA aminoacylation for protein translation	3.50E-02
202	GO:0009768: photosynthesis, light harvesting in photosystem I	3.50E-02
203	GO:0031408: oxylipin biosynthetic process	3.74E-02
204	GO:0016114: terpenoid biosynthetic process	3.74E-02
205	GO:0035428: hexose transmembrane transport	3.99E-02
206	GO:0030245: cellulose catabolic process	3.99E-02
207	GO:2000022: regulation of jasmonic acid mediated signaling pathway	3.99E-02
208	GO:0009809: lignin biosynthetic process	4.00E-02
209	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	4.25E-02
210	GO:0055114: oxidation-reduction process	4.45E-02
211	GO:0009561: megagametogenesis	4.51E-02
212	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	4.77E-02

Rank	GO Term	Adjusted P value
1	GO:0004823: leucine-tRNA ligase activity	0.00E+00
2	GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity	0.00E+00
3	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
4	GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity	0.00E+00
5	GO:0004852: uroporphyrinogen-III synthase activity	0.00E+00
6	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
7	GO:0005048: signal sequence binding	0.00E+00
8	GO:0004076: biotin synthase activity	0.00E+00
9	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
10	GO:0046406: magnesium protoporphyrin IX methyltransferase activity	0.00E+00
11	GO:0047513: 1,2-alpha-L-fucosidase activity	0.00E+00
12	GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity	0.00E+00
13	GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity	0.00E+00
14	GO:0046422: violaxanthin de-epoxidase activity	0.00E+00
15	GO:0019843: rRNA binding	2.05E-19
16	GO:0003735: structural constituent of ribosome	8.24E-09
17	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.58E-07
18	GO:0016851: magnesium chelatase activity	9.06E-07
19	GO:0009977: proton motive force dependent protein transmembrane transporter activity	1.49E-05
20	GO:0008266: poly(U) RNA binding	1.58E-05
21	GO:0005528: FK506 binding	3.17E-05
22	GO:0016168: chlorophyll binding	3.88E-05
23	GO:0043023: ribosomal large subunit binding	1.05E-04
24	GO:0043495: protein anchor	1.80E-04
25	GO:0004130: cytochrome-c peroxidase activity	3.83E-04
26	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	3.83E-04
27	GO:0004163: diphosphomevalonate decarboxylase activity	5.87E-04
28	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	5.87E-04
29	GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity	5.87E-04
30	GO:0042586: peptide deformylase activity	5.87E-04
31	GO:0045485: omega-6 fatty acid desaturase activity	5.87E-04
32	GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity	5.87E-04
33	GO:0004333: fumarate hydratase activity	5.87E-04
34	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	5.87E-04
35	GO:0050139: nicotinate-N-glucosyltransferase activity	5.87E-04
36	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	5.87E-04
37	GO:0004425: indole-3-glycerol-phosphate synthase activity	5.87E-04
38	GO:0004856: xylulokinase activity	5.87E-04
39	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	5.87E-04
40	GO:0004321: fatty-acyl-CoA synthase activity	5.87E-04
41	GO:0005080: protein kinase C binding	5.87E-04
42	GO:0010242: oxygen evolving activity	5.87E-04
43	GO:0019899: enzyme binding	6.51E-04
44	GO:0022891: substrate-specific transmembrane transporter activity	7.04E-04
45	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	1.26E-03
46	GO:0047746: chlorophyllase activity	1.26E-03
47	GO:0004617: phosphoglycerate dehydrogenase activity	1.26E-03
48	GO:0033201: alpha-1,4-glucan synthase activity	1.26E-03
49	GO:0016630: protochlorophyllide reductase activity	1.26E-03
50	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	1.26E-03
51	GO:0004751: ribose-5-phosphate isomerase activity	2.07E-03
52	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	2.07E-03
53	GO:0016531: copper chaperone activity	2.07E-03
54	GO:0004373: glycogen (starch) synthase activity	2.07E-03
55	GO:0019829: cation-transporting ATPase activity	2.07E-03
56	GO:0002161: aminoacyl-tRNA editing activity	2.07E-03
57	GO:0015250: water channel activity	2.20E-03
58	GO:0031072: heat shock protein binding	2.45E-03
59	GO:0004565: beta-galactosidase activity	2.45E-03
60	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.51E-03
61	GO:0008236: serine-type peptidase activity	2.90E-03
62	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	3.01E-03
63	GO:0052654: L-leucine transaminase activity	3.01E-03
64	GO:0008097: 5S rRNA binding	3.01E-03
65	GO:0052655: L-valine transaminase activity	3.01E-03
66	GO:0052656: L-isoleucine transaminase activity	3.01E-03
67	GO:0016788: hydrolase activity, acting on ester bonds	3.68E-03
68	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	4.06E-03
69	GO:0004659: prenyltransferase activity	4.06E-03
70	GO:0016279: protein-lysine N-methyltransferase activity	4.06E-03
71	GO:0001053: plastid sigma factor activity	4.06E-03
72	GO:0010011: auxin binding	4.06E-03
73	GO:0004345: glucose-6-phosphate dehydrogenase activity	4.06E-03
74	GO:0004045: aminoacyl-tRNA hydrolase activity	4.06E-03
75	GO:0009011: starch synthase activity	4.06E-03
76	GO:0016987: sigma factor activity	4.06E-03
77	GO:0004084: branched-chain-amino-acid transaminase activity	4.06E-03
78	GO:0016491: oxidoreductase activity	4.07E-03
79	GO:0016773: phosphotransferase activity, alcohol group as acceptor	5.21E-03
80	GO:0004040: amidase activity	5.21E-03
81	GO:0003959: NADPH dehydrogenase activity	5.21E-03
82	GO:0030570: pectate lyase activity	5.60E-03
83	GO:0016787: hydrolase activity	5.88E-03
84	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	6.46E-03
85	GO:0016688: L-ascorbate peroxidase activity	6.46E-03
86	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	7.71E-03
87	GO:0004124: cysteine synthase activity	7.81E-03
88	GO:0051920: peroxiredoxin activity	7.81E-03
89	GO:0004620: phospholipase activity	9.25E-03
90	GO:0042802: identical protein binding	9.79E-03
91	GO:0004033: aldo-keto reductase (NADP) activity	1.08E-02
92	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.08E-02
93	GO:0016209: antioxidant activity	1.08E-02
94	GO:0008312: 7S RNA binding	1.08E-02
95	GO:0052747: sinapyl alcohol dehydrogenase activity	1.08E-02
96	GO:0043022: ribosome binding	1.08E-02
97	GO:0005509: calcium ion binding	1.22E-02
98	GO:0005375: copper ion transmembrane transporter activity	1.24E-02
99	GO:0003723: RNA binding	1.26E-02
100	GO:0003729: mRNA binding	1.38E-02
101	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	1.41E-02
102	GO:0016207: 4-coumarate-CoA ligase activity	1.41E-02
103	GO:0005381: iron ion transmembrane transporter activity	1.59E-02
104	GO:0030234: enzyme regulator activity	1.77E-02
105	GO:0004568: chitinase activity	1.77E-02
106	GO:0008047: enzyme activator activity	1.77E-02
107	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.82E-02
108	GO:0047372: acylglycerol lipase activity	1.96E-02
109	GO:0004252: serine-type endopeptidase activity	2.04E-02
110	GO:0045551: cinnamyl-alcohol dehydrogenase activity	2.16E-02
111	GO:0008378: galactosyltransferase activity	2.16E-02
112	GO:0010329: auxin efflux transmembrane transporter activity	2.37E-02
113	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	2.37E-02
114	GO:0009982: pseudouridine synthase activity	2.37E-02
115	GO:0004022: alcohol dehydrogenase (NAD) activity	2.37E-02
116	GO:0050661: NADP binding	2.63E-02
117	GO:0005515: protein binding	2.76E-02
118	GO:0031409: pigment binding	3.03E-02
119	GO:0003714: transcription corepressor activity	3.26E-02
120	GO:0043424: protein histidine kinase binding	3.50E-02
121	GO:0051287: NAD binding	3.60E-02
122	GO:0004176: ATP-dependent peptidase activity	3.74E-02
123	GO:0033612: receptor serine/threonine kinase binding	3.74E-02
124	GO:0004707: MAP kinase activity	3.74E-02
125	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	3.99E-02
126	GO:0008810: cellulase activity	4.25E-02
127	GO:0003756: protein disulfide isomerase activity	4.51E-02
128	GO:0004601: peroxidase activity	4.60E-02
129	GO:0047134: protein-disulfide reductase activity	4.77E-02
130	GO:0004812: aminoacyl-tRNA ligase activity	4.77E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0043235: receptor complex	0.00E+00
3	GO:0098572: stromal side of plastid thylakoid membrane	0.00E+00
4	GO:0009515: granal stacked thylakoid	0.00E+00
5	GO:0009507: chloroplast	5.38E-91
6	GO:0009570: chloroplast stroma	8.04E-58
7	GO:0009535: chloroplast thylakoid membrane	2.00E-53
8	GO:0009941: chloroplast envelope	1.42E-46
9	GO:0009534: chloroplast thylakoid	3.04E-41
10	GO:0009579: thylakoid	3.31E-30
11	GO:0009543: chloroplast thylakoid lumen	2.84E-27
12	GO:0031977: thylakoid lumen	9.09E-22
13	GO:0005840: ribosome	4.11E-12
14	GO:0030095: chloroplast photosystem II	1.47E-10
15	GO:0009654: photosystem II oxygen evolving complex	9.06E-10
16	GO:0019898: extrinsic component of membrane	1.74E-08
17	GO:0033281: TAT protein transport complex	1.91E-07
18	GO:0010007: magnesium chelatase complex	1.91E-07
19	GO:0009533: chloroplast stromal thylakoid	4.56E-07
20	GO:0010287: plastoglobule	2.22E-06
21	GO:0009523: photosystem II	1.15E-05
22	GO:0031969: chloroplast membrane	1.24E-05
23	GO:0016020: membrane	2.48E-05
24	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	3.83E-04
25	GO:0042651: thylakoid membrane	4.95E-04
26	GO:0009547: plastid ribosome	5.87E-04
27	GO:0045239: tricarboxylic acid cycle enzyme complex	5.87E-04
28	GO:0031361: integral component of thylakoid membrane	5.87E-04
29	GO:0043674: columella	5.87E-04
30	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	5.87E-04
31	GO:0048046: apoplast	9.71E-04
32	GO:0009522: photosystem I	1.15E-03
33	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.18E-03
34	GO:0080085: signal recognition particle, chloroplast targeting	1.26E-03
35	GO:0030093: chloroplast photosystem I	1.26E-03
36	GO:0009295: nucleoid	1.90E-03
37	GO:0009509: chromoplast	2.07E-03
38	GO:0000311: plastid large ribosomal subunit	2.16E-03
39	GO:0032040: small-subunit processome	2.16E-03
40	GO:0009508: plastid chromosome	2.45E-03
41	GO:0009706: chloroplast inner membrane	2.94E-03
42	GO:0032432: actin filament bundle	3.01E-03
43	GO:0009536: plastid	3.40E-03
44	GO:0009544: chloroplast ATP synthase complex	4.06E-03
45	GO:0009526: plastid envelope	4.06E-03
46	GO:0015935: small ribosomal subunit	4.68E-03
47	GO:0055035: plastid thylakoid membrane	5.21E-03
48	GO:0005618: cell wall	6.53E-03
49	GO:0042807: central vacuole	9.25E-03
50	GO:0009501: amyloplast	1.08E-02
51	GO:0010319: stromule	1.23E-02
52	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.24E-02
53	GO:0030529: intracellular ribonucleoprotein complex	1.39E-02
54	GO:0042644: chloroplast nucleoid	1.41E-02
55	GO:0008180: COP9 signalosome	1.41E-02
56	GO:0055028: cortical microtubule	1.77E-02
57	GO:0005884: actin filament	1.96E-02
58	GO:0000312: plastid small ribosomal subunit	2.58E-02
59	GO:0030076: light-harvesting complex	2.80E-02