Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G09410

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0080053: response to phenylalanine0.00E+00
2GO:0015690: aluminum cation transport0.00E+00
3GO:0043201: response to leucine0.00E+00
4GO:0006793: phosphorus metabolic process0.00E+00
5GO:0080052: response to histidine0.00E+00
6GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
7GO:0006182: cGMP biosynthetic process0.00E+00
8GO:0072722: response to amitrole0.00E+00
9GO:0006592: ornithine biosynthetic process0.00E+00
10GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
11GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
12GO:0009617: response to bacterium1.10E-10
13GO:0042742: defense response to bacterium1.34E-09
14GO:0010120: camalexin biosynthetic process1.79E-07
15GO:0006468: protein phosphorylation1.17E-06
16GO:0006952: defense response2.66E-06
17GO:0071456: cellular response to hypoxia9.32E-06
18GO:0010112: regulation of systemic acquired resistance1.87E-05
19GO:0043069: negative regulation of programmed cell death3.27E-05
20GO:0009682: induced systemic resistance4.17E-05
21GO:0010150: leaf senescence4.59E-05
22GO:0080142: regulation of salicylic acid biosynthetic process6.61E-05
23GO:0009627: systemic acquired resistance8.60E-05
24GO:0070588: calcium ion transmembrane transport9.25E-05
25GO:0009751: response to salicylic acid9.74E-05
26GO:0009697: salicylic acid biosynthetic process1.04E-04
27GO:0000162: tryptophan biosynthetic process1.09E-04
28GO:0009407: toxin catabolic process1.36E-04
29GO:0002238: response to molecule of fungal origin1.50E-04
30GO:0010200: response to chitin2.38E-04
31GO:0051245: negative regulation of cellular defense response3.22E-04
32GO:0099132: ATP hydrolysis coupled cation transmembrane transport3.22E-04
33GO:0010726: positive regulation of hydrogen peroxide metabolic process3.22E-04
34GO:1901183: positive regulation of camalexin biosynthetic process3.22E-04
35GO:0009700: indole phytoalexin biosynthetic process3.22E-04
36GO:0010230: alternative respiration3.22E-04
37GO:0042759: long-chain fatty acid biosynthetic process3.22E-04
38GO:0046244: salicylic acid catabolic process3.22E-04
39GO:0080120: CAAX-box protein maturation3.22E-04
40GO:0071586: CAAX-box protein processing3.22E-04
41GO:0009636: response to toxic substance3.24E-04
42GO:0030091: protein repair3.36E-04
43GO:0050832: defense response to fungus4.18E-04
44GO:0000302: response to reactive oxygen species4.44E-04
45GO:0006891: intra-Golgi vesicle-mediated transport4.44E-04
46GO:0002229: defense response to oomycetes4.44E-04
47GO:0032259: methylation4.63E-04
48GO:0055114: oxidation-reduction process5.06E-04
49GO:0009620: response to fungus6.50E-04
50GO:0009866: induced systemic resistance, ethylene mediated signaling pathway7.02E-04
51GO:0042939: tripeptide transport7.02E-04
52GO:1902000: homogentisate catabolic process7.02E-04
53GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine7.02E-04
54GO:0006423: cysteinyl-tRNA aminoacylation7.02E-04
55GO:0019441: tryptophan catabolic process to kynurenine7.02E-04
56GO:0051592: response to calcium ion7.02E-04
57GO:0080183: response to photooxidative stress7.02E-04
58GO:0018022: peptidyl-lysine methylation7.02E-04
59GO:0080151: positive regulation of salicylic acid mediated signaling pathway7.02E-04
60GO:0009615: response to virus7.12E-04
61GO:0052544: defense response by callose deposition in cell wall7.88E-04
62GO:0002213: defense response to insect8.99E-04
63GO:0009817: defense response to fungus, incompatible interaction9.92E-04
64GO:0008219: cell death9.92E-04
65GO:0048281: inflorescence morphogenesis1.14E-03
66GO:1900140: regulation of seedling development1.14E-03
67GO:0002237: response to molecule of bacterial origin1.14E-03
68GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.14E-03
69GO:0010351: lithium ion transport1.14E-03
70GO:0010272: response to silver ion1.14E-03
71GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway1.14E-03
72GO:0009072: aromatic amino acid family metabolic process1.14E-03
73GO:0042343: indole glucosinolate metabolic process1.28E-03
74GO:0006612: protein targeting to membrane1.63E-03
75GO:0048530: fruit morphogenesis1.63E-03
76GO:0006882: cellular zinc ion homeostasis1.63E-03
77GO:0046513: ceramide biosynthetic process1.63E-03
78GO:0019438: aromatic compound biosynthetic process1.63E-03
79GO:0048194: Golgi vesicle budding1.63E-03
80GO:0002239: response to oomycetes1.63E-03
81GO:0006874: cellular calcium ion homeostasis1.74E-03
82GO:0051707: response to other organism1.84E-03
83GO:0006979: response to oxidative stress2.04E-03
84GO:0007166: cell surface receptor signaling pathway2.09E-03
85GO:0045088: regulation of innate immune response2.19E-03
86GO:0006536: glutamate metabolic process2.19E-03
87GO:0071219: cellular response to molecule of bacterial origin2.19E-03
88GO:0010363: regulation of plant-type hypersensitive response2.19E-03
89GO:0042938: dipeptide transport2.19E-03
90GO:1901141: regulation of lignin biosynthetic process2.19E-03
91GO:0060548: negative regulation of cell death2.19E-03
92GO:0010483: pollen tube reception2.19E-03
93GO:0009625: response to insect2.28E-03
94GO:0042538: hyperosmotic salinity response2.46E-03
95GO:0000304: response to singlet oxygen2.80E-03
96GO:0030308: negative regulation of cell growth2.80E-03
97GO:0006564: L-serine biosynthetic process2.80E-03
98GO:0042631: cellular response to water deprivation2.89E-03
99GO:0009646: response to absence of light3.35E-03
100GO:0006508: proteolysis3.41E-03
101GO:0009117: nucleotide metabolic process3.46E-03
102GO:0009759: indole glucosinolate biosynthetic process3.46E-03
103GO:0006561: proline biosynthetic process3.46E-03
104GO:0010942: positive regulation of cell death3.46E-03
105GO:0010256: endomembrane system organization3.46E-03
106GO:0009851: auxin biosynthetic process3.60E-03
107GO:0010199: organ boundary specification between lateral organs and the meristem4.17E-03
108GO:0010555: response to mannitol4.17E-03
109GO:2000067: regulation of root morphogenesis4.17E-03
110GO:0080167: response to karrikin4.60E-03
111GO:1900056: negative regulation of leaf senescence4.92E-03
112GO:0030026: cellular manganese ion homeostasis4.92E-03
113GO:0019745: pentacyclic triterpenoid biosynthetic process4.92E-03
114GO:0046686: response to cadmium ion5.28E-03
115GO:0043068: positive regulation of programmed cell death5.71E-03
116GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline5.71E-03
117GO:0031540: regulation of anthocyanin biosynthetic process5.71E-03
118GO:0009816: defense response to bacterium, incompatible interaction5.89E-03
119GO:0009607: response to biotic stimulus5.89E-03
120GO:0007186: G-protein coupled receptor signaling pathway6.55E-03
121GO:0006526: arginine biosynthetic process6.55E-03
122GO:0043562: cellular response to nitrogen levels6.55E-03
123GO:0009808: lignin metabolic process6.55E-03
124GO:0009699: phenylpropanoid biosynthetic process6.55E-03
125GO:0009821: alkaloid biosynthetic process7.42E-03
126GO:0051865: protein autoubiquitination7.42E-03
127GO:0007338: single fertilization7.42E-03
128GO:0048268: clathrin coat assembly8.34E-03
129GO:0008202: steroid metabolic process8.34E-03
130GO:1900426: positive regulation of defense response to bacterium8.34E-03
131GO:0010205: photoinhibition8.34E-03
132GO:0055062: phosphate ion homeostasis9.30E-03
133GO:0006032: chitin catabolic process9.30E-03
134GO:0009688: abscisic acid biosynthetic process9.30E-03
135GO:0006099: tricarboxylic acid cycle9.65E-03
136GO:0007165: signal transduction9.85E-03
137GO:0000272: polysaccharide catabolic process1.03E-02
138GO:0009750: response to fructose1.03E-02
139GO:0048229: gametophyte development1.03E-02
140GO:0009737: response to abscisic acid1.03E-02
141GO:0012501: programmed cell death1.13E-02
142GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.13E-02
143GO:0000266: mitochondrial fission1.13E-02
144GO:0006790: sulfur compound metabolic process1.13E-02
145GO:0042542: response to hydrogen peroxide1.14E-02
146GO:0009718: anthocyanin-containing compound biosynthetic process1.24E-02
147GO:0010143: cutin biosynthetic process1.35E-02
148GO:0006541: glutamine metabolic process1.35E-02
149GO:0046854: phosphatidylinositol phosphorylation1.46E-02
150GO:0010053: root epidermal cell differentiation1.46E-02
151GO:0009846: pollen germination1.50E-02
152GO:0010025: wax biosynthetic process1.58E-02
153GO:0034976: response to endoplasmic reticulum stress1.58E-02
154GO:0010224: response to UV-B1.67E-02
155GO:0080147: root hair cell development1.70E-02
156GO:0009863: salicylic acid mediated signaling pathway1.70E-02
157GO:0005992: trehalose biosynthetic process1.70E-02
158GO:0006487: protein N-linked glycosylation1.70E-02
159GO:0009735: response to cytokinin1.73E-02
160GO:0009695: jasmonic acid biosynthetic process1.83E-02
161GO:0031408: oxylipin biosynthetic process1.95E-02
162GO:0048278: vesicle docking1.95E-02
163GO:0003333: amino acid transmembrane transport1.95E-02
164GO:0016998: cell wall macromolecule catabolic process1.95E-02
165GO:0098542: defense response to other organism1.95E-02
166GO:0009611: response to wounding2.04E-02
167GO:0009814: defense response, incompatible interaction2.08E-02
168GO:0030433: ubiquitin-dependent ERAD pathway2.08E-02
169GO:0031348: negative regulation of defense response2.08E-02
170GO:0019748: secondary metabolic process2.08E-02
171GO:0006012: galactose metabolic process2.22E-02
172GO:0009624: response to nematode2.30E-02
173GO:0010584: pollen exine formation2.35E-02
174GO:0045454: cell redox homeostasis2.43E-02
175GO:0009742: brassinosteroid mediated signaling pathway2.44E-02
176GO:0070417: cellular response to cold2.49E-02
177GO:0042147: retrograde transport, endosome to Golgi2.49E-02
178GO:0006886: intracellular protein transport2.53E-02
179GO:0042391: regulation of membrane potential2.63E-02
180GO:0010197: polar nucleus fusion2.78E-02
181GO:0048544: recognition of pollen2.92E-02
182GO:0061025: membrane fusion2.92E-02
183GO:0006814: sodium ion transport2.92E-02
184GO:0009749: response to glucose3.07E-02
185GO:0008654: phospholipid biosynthetic process3.07E-02
186GO:0016032: viral process3.38E-02
187GO:0009630: gravitropism3.38E-02
188GO:0019760: glucosinolate metabolic process3.70E-02
189GO:0010252: auxin homeostasis3.70E-02
190GO:0009567: double fertilization forming a zygote and endosperm3.70E-02
191GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process4.43E-02
192GO:0006906: vesicle fusion4.53E-02
193GO:0016311: dephosphorylation4.88E-02
RankGO TermAdjusted P value
1GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
2GO:0016312: inositol bisphosphate phosphatase activity0.00E+00
3GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
4GO:0008777: acetylornithine deacetylase activity0.00E+00
5GO:0016034: maleylacetoacetate isomerase activity0.00E+00
6GO:0004168: dolichol kinase activity0.00E+00
7GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
8GO:0005516: calmodulin binding2.02E-08
9GO:0005524: ATP binding1.62E-05
10GO:0004364: glutathione transferase activity2.30E-05
11GO:0005388: calcium-transporting ATPase activity6.40E-05
12GO:0004674: protein serine/threonine kinase activity8.97E-05
13GO:0016301: kinase activity1.45E-04
14GO:0033743: peptide-methionine (R)-S-oxide reductase activity2.05E-04
15GO:0004321: fatty-acyl-CoA synthase activity3.22E-04
16GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity3.22E-04
17GO:2001147: camalexin binding3.22E-04
18GO:0031957: very long-chain fatty acid-CoA ligase activity3.22E-04
19GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity3.22E-04
20GO:0090353: polygalacturonase inhibitor activity3.22E-04
21GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity3.22E-04
22GO:2001227: quercitrin binding3.22E-04
23GO:0004425: indole-3-glycerol-phosphate synthase activity3.22E-04
24GO:0033984: indole-3-glycerol-phosphate lyase activity3.22E-04
25GO:0008171: O-methyltransferase activity6.82E-04
26GO:0032934: sterol binding7.02E-04
27GO:0004061: arylformamidase activity7.02E-04
28GO:0004775: succinate-CoA ligase (ADP-forming) activity7.02E-04
29GO:0042937: tripeptide transporter activity7.02E-04
30GO:0004385: guanylate kinase activity7.02E-04
31GO:0050736: O-malonyltransferase activity7.02E-04
32GO:0004776: succinate-CoA ligase (GDP-forming) activity7.02E-04
33GO:0004566: beta-glucuronidase activity7.02E-04
34GO:0050291: sphingosine N-acyltransferase activity7.02E-04
35GO:0004817: cysteine-tRNA ligase activity7.02E-04
36GO:0008757: S-adenosylmethionine-dependent methyltransferase activity9.32E-04
37GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity1.14E-03
38GO:0004148: dihydrolipoyl dehydrogenase activity1.14E-03
39GO:0031683: G-protein beta/gamma-subunit complex binding1.14E-03
40GO:0004383: guanylate cyclase activity1.14E-03
41GO:0016595: glutamate binding1.14E-03
42GO:0004049: anthranilate synthase activity1.14E-03
43GO:0001664: G-protein coupled receptor binding1.14E-03
44GO:0008430: selenium binding1.14E-03
45GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.19E-03
46GO:0004190: aspartic-type endopeptidase activity1.28E-03
47GO:0004672: protein kinase activity1.55E-03
48GO:0035529: NADH pyrophosphatase activity1.63E-03
49GO:0042299: lupeol synthase activity1.63E-03
50GO:0004351: glutamate decarboxylase activity1.63E-03
51GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.65E-03
52GO:0005506: iron ion binding1.94E-03
53GO:0004031: aldehyde oxidase activity2.19E-03
54GO:0050302: indole-3-acetaldehyde oxidase activity2.19E-03
55GO:0010279: indole-3-acetic acid amido synthetase activity2.19E-03
56GO:0016866: intramolecular transferase activity2.19E-03
57GO:0016279: protein-lysine N-methyltransferase activity2.19E-03
58GO:0015368: calcium:cation antiporter activity2.19E-03
59GO:0004834: tryptophan synthase activity2.19E-03
60GO:0042936: dipeptide transporter activity2.19E-03
61GO:0015369: calcium:proton antiporter activity2.19E-03
62GO:0009055: electron carrier activity2.36E-03
63GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity2.80E-03
64GO:0005496: steroid binding2.80E-03
65GO:0047631: ADP-ribose diphosphatase activity2.80E-03
66GO:0008168: methyltransferase activity3.13E-03
67GO:0005507: copper ion binding3.19E-03
68GO:0000210: NAD+ diphosphatase activity3.46E-03
69GO:0004029: aldehyde dehydrogenase (NAD) activity3.46E-03
70GO:0004605: phosphatidate cytidylyltransferase activity3.46E-03
71GO:0050660: flavin adenine dinucleotide binding4.15E-03
72GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity4.17E-03
73GO:0004602: glutathione peroxidase activity4.17E-03
74GO:0102391: decanoate--CoA ligase activity4.17E-03
75GO:0004012: phospholipid-translocating ATPase activity4.17E-03
76GO:0004656: procollagen-proline 4-dioxygenase activity4.17E-03
77GO:0008113: peptide-methionine (S)-S-oxide reductase activity4.17E-03
78GO:0043295: glutathione binding4.92E-03
79GO:0004467: long-chain fatty acid-CoA ligase activity4.92E-03
80GO:0004034: aldose 1-epimerase activity5.71E-03
81GO:0004033: aldo-keto reductase (NADP) activity5.71E-03
82GO:0015491: cation:cation antiporter activity5.71E-03
83GO:0004714: transmembrane receptor protein tyrosine kinase activity5.71E-03
84GO:0004564: beta-fructofuranosidase activity5.71E-03
85GO:0008142: oxysterol binding6.55E-03
86GO:0030247: polysaccharide binding6.56E-03
87GO:0004683: calmodulin-dependent protein kinase activity6.56E-03
88GO:0008565: protein transporter activity7.05E-03
89GO:0016207: 4-coumarate-CoA ligase activity7.42E-03
90GO:0071949: FAD binding7.42E-03
91GO:0004675: transmembrane receptor protein serine/threonine kinase activity7.73E-03
92GO:0004222: metalloendopeptidase activity8.02E-03
93GO:0046872: metal ion binding8.03E-03
94GO:0004575: sucrose alpha-glucosidase activity8.34E-03
95GO:0016844: strictosidine synthase activity8.34E-03
96GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity8.34E-03
97GO:0050897: cobalt ion binding8.41E-03
98GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors9.22E-03
99GO:0004713: protein tyrosine kinase activity9.30E-03
100GO:0004568: chitinase activity9.30E-03
101GO:0005545: 1-phosphatidylinositol binding9.30E-03
102GO:0019825: oxygen binding1.06E-02
103GO:0004022: alcohol dehydrogenase (NAD) activity1.24E-02
104GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.24E-02
105GO:0005262: calcium channel activity1.24E-02
106GO:0051537: 2 iron, 2 sulfur cluster binding1.29E-02
107GO:0004175: endopeptidase activity1.35E-02
108GO:0008061: chitin binding1.46E-02
109GO:0004970: ionotropic glutamate receptor activity1.46E-02
110GO:0005217: intracellular ligand-gated ion channel activity1.46E-02
111GO:0030552: cAMP binding1.46E-02
112GO:0004867: serine-type endopeptidase inhibitor activity1.46E-02
113GO:0030553: cGMP binding1.46E-02
114GO:0020037: heme binding1.54E-02
115GO:0016298: lipase activity1.67E-02
116GO:0005509: calcium ion binding1.69E-02
117GO:0031418: L-ascorbic acid binding1.70E-02
118GO:0003954: NADH dehydrogenase activity1.70E-02
119GO:0005216: ion channel activity1.83E-02
120GO:0033612: receptor serine/threonine kinase binding1.95E-02
121GO:0004707: MAP kinase activity1.95E-02
122GO:0003756: protein disulfide isomerase activity2.35E-02
123GO:0015035: protein disulfide oxidoreductase activity2.37E-02
124GO:0004871: signal transducer activity2.58E-02
125GO:0030551: cyclic nucleotide binding2.63E-02
126GO:0005249: voltage-gated potassium channel activity2.63E-02
127GO:0008080: N-acetyltransferase activity2.78E-02
128GO:0030276: clathrin binding2.78E-02
129GO:0016853: isomerase activity2.92E-02
130GO:0030246: carbohydrate binding3.07E-02
131GO:0003924: GTPase activity3.16E-02
132GO:0008237: metallopeptidase activity3.86E-02
133GO:0051213: dioxygenase activity4.19E-02
134GO:0009931: calcium-dependent protein serine/threonine kinase activity4.53E-02
RankGO TermAdjusted P value
1GO:0005783: endoplasmic reticulum3.62E-09
2GO:0005886: plasma membrane6.05E-07
3GO:0016021: integral component of membrane3.26E-05
4GO:0005829: cytosol3.56E-05
5GO:0045252: oxoglutarate dehydrogenase complex3.22E-04
6GO:0031304: intrinsic component of mitochondrial inner membrane7.02E-04
7GO:0005765: lysosomal membrane7.88E-04
8GO:0030176: integral component of endoplasmic reticulum membrane1.28E-03
9GO:0005795: Golgi stack1.28E-03
10GO:0030660: Golgi-associated vesicle membrane2.19E-03
11GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane2.19E-03
12GO:0000164: protein phosphatase type 1 complex2.80E-03
13GO:0008250: oligosaccharyltransferase complex2.80E-03
14GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane5.71E-03
15GO:0009505: plant-type cell wall9.89E-03
16GO:0031012: extracellular matrix1.24E-02
17GO:0005887: integral component of plasma membrane1.32E-02
18GO:0005773: vacuole1.35E-02
19GO:0005576: extracellular region1.37E-02
20GO:0016020: membrane1.85E-02
21GO:0005905: clathrin-coated pit1.95E-02
22GO:0005834: heterotrimeric G-protein complex2.03E-02
23GO:0030136: clathrin-coated vesicle2.49E-02
24GO:0005794: Golgi apparatus3.53E-02
25GO:0043231: intracellular membrane-bounded organelle3.56E-02
26GO:0005618: cell wall3.73E-02
27GO:0031225: anchored component of membrane3.80E-02
28GO:0005789: endoplasmic reticulum membrane3.93E-02
29GO:0009705: plant-type vacuole membrane3.96E-02
30GO:0005788: endoplasmic reticulum lumen4.36E-02
<
Gene type



Gene DE type