Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G09200

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006412: translation4.57E-102
2GO:0042254: ribosome biogenesis8.70E-20
3GO:0009735: response to cytokinin3.45E-09
4GO:0000027: ribosomal large subunit assembly7.55E-08
5GO:0009955: adaxial/abaxial pattern specification1.35E-07
6GO:0000028: ribosomal small subunit assembly3.46E-07
7GO:0002181: cytoplasmic translation1.47E-06
8GO:0042274: ribosomal small subunit biogenesis6.70E-06
9GO:1990258: histone glutamine methylation8.43E-05
10GO:0006407: rRNA export from nucleus8.43E-05
11GO:0000494: box C/D snoRNA 3'-end processing8.43E-05
12GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)8.43E-05
13GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)8.43E-05
14GO:0008283: cell proliferation1.66E-04
15GO:0009965: leaf morphogenesis1.95E-04
16GO:0006123: mitochondrial electron transport, cytochrome c to oxygen2.00E-04
17GO:0048569: post-embryonic animal organ development2.00E-04
18GO:0006364: rRNA processing2.50E-04
19GO:0042256: mature ribosome assembly3.35E-04
20GO:0090506: axillary shoot meristem initiation3.35E-04
21GO:0040007: growth3.73E-04
22GO:0006165: nucleoside diphosphate phosphorylation4.84E-04
23GO:0006228: UTP biosynthetic process4.84E-04
24GO:0070301: cellular response to hydrogen peroxide4.84E-04
25GO:0006241: CTP biosynthetic process4.84E-04
26GO:2000032: regulation of secondary shoot formation6.44E-04
27GO:0010483: pollen tube reception6.44E-04
28GO:0006183: GTP biosynthetic process6.44E-04
29GO:0009793: embryo development ending in seed dormancy7.83E-04
30GO:0071493: cellular response to UV-B8.14E-04
31GO:0031167: rRNA methylation8.14E-04
32GO:0018279: protein N-linked glycosylation via asparagine8.14E-04
33GO:0000470: maturation of LSU-rRNA9.94E-04
34GO:0000911: cytokinesis by cell plate formation1.18E-03
35GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c1.39E-03
36GO:0001510: RNA methylation1.83E-03
37GO:0006002: fructose 6-phosphate metabolic process1.83E-03
38GO:0009245: lipid A biosynthetic process2.06E-03
39GO:0006913: nucleocytoplasmic transport2.82E-03
40GO:0010015: root morphogenesis2.82E-03
41GO:0006487: protein N-linked glycosylation4.57E-03
42GO:0009409: response to cold5.21E-03
43GO:0008033: tRNA processing6.97E-03
44GO:0032502: developmental process8.90E-03
45GO:0010090: trichome morphogenesis9.30E-03
46GO:0010252: auxin homeostasis9.72E-03
47GO:0006414: translational elongation9.98E-03
48GO:0009644: response to high light intensity1.99E-02
49GO:0009651: response to salt stress2.05E-02
50GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process2.15E-02
51GO:0046686: response to cadmium ion2.57E-02
52GO:0006096: glycolytic process2.62E-02
53GO:0009620: response to fungus2.80E-02
54GO:0006633: fatty acid biosynthetic process4.12E-02
55GO:0006413: translational initiation4.19E-02
RankGO TermAdjusted P value
1GO:0003735: structural constituent of ribosome7.74E-119
2GO:0003729: mRNA binding3.66E-36
3GO:0019843: rRNA binding6.76E-08
4GO:0008097: 5S rRNA binding3.52E-06
5GO:0015157: oligosaccharide transmembrane transporter activity8.43E-05
6GO:1990259: histone-glutamine methyltransferase activity8.43E-05
7GO:0070181: small ribosomal subunit rRNA binding3.35E-04
8GO:0008649: rRNA methyltransferase activity3.35E-04
9GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity3.35E-04
10GO:0004550: nucleoside diphosphate kinase activity4.84E-04
11GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity8.14E-04
12GO:0003723: RNA binding8.60E-04
13GO:0031177: phosphopantetheine binding9.94E-04
14GO:0000035: acyl binding1.18E-03
15GO:0003872: 6-phosphofructokinase activity1.39E-03
16GO:0030515: snoRNA binding1.39E-03
17GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process1.60E-03
18GO:0050897: cobalt ion binding1.47E-02
19GO:0003746: translation elongation factor activity1.57E-02
RankGO TermAdjusted P value
1GO:0022626: cytosolic ribosome3.85E-96
2GO:0022625: cytosolic large ribosomal subunit3.12E-65
3GO:0005840: ribosome9.87E-56
4GO:0022627: cytosolic small ribosomal subunit1.44E-49
5GO:0005829: cytosol1.45E-41
6GO:0005730: nucleolus5.48E-32
7GO:0009506: plasmodesma7.08E-30
8GO:0005737: cytoplasm4.54E-24
9GO:0015934: large ribosomal subunit8.04E-22
10GO:0016020: membrane1.34E-19
11GO:0005618: cell wall6.60E-15
12GO:0005774: vacuolar membrane3.83E-14
13GO:0015935: small ribosomal subunit1.09E-09
14GO:0005773: vacuole2.12E-09
15GO:0005886: plasma membrane5.90E-08
16GO:0009507: chloroplast1.17E-07
17GO:0010318: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex8.43E-05
18GO:0030686: 90S preribosome8.43E-05
19GO:0070469: respiratory chain2.83E-04
20GO:0005853: eukaryotic translation elongation factor 1 complex3.35E-04
21GO:0008250: oligosaccharyltransferase complex8.14E-04
22GO:0031428: box C/D snoRNP complex9.94E-04
23GO:0015030: Cajal body2.30E-03
24GO:0032040: small-subunit processome3.09E-03
25GO:0005758: mitochondrial intermembrane space4.57E-03
26GO:0016592: mediator complex8.90E-03
27GO:0005622: intracellular1.25E-02
28GO:0005759: mitochondrial matrix4.12E-02
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Gene type



Gene DE type